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The map label for this gene is yhfK [H]

Identifier: 119946306

GI number: 119946306

Start: 3277977

End: 3278612

Strand: Direct

Name: yhfK [H]

Synonym: Ping_2674

Alternate gene names: 119946306

Gene position: 3277977-3278612 (Clockwise)

Preceding gene: 119946305

Following gene: 119946307

Centisome position: 71.89

GC content: 41.51

Gene sequence:

>636_bases
ATGAAAAAAACACTAATTATAGGCGCAAGCGGACAAATCGGTAAAATGACGACAAAGCAACTGTTAGCCGATGGTAAAAC
AGTAATAGCCTTAGTGCGTGATAAAAGTAAATTGGCTGATATTAGCTGCGATAAACTGCACATAGTTGAGGGGGATTTGG
AGAATGACTTCAGCCAGGCATTTGCAGATTGCGATCAGGTCATATTCAGTGCCGGCTCCGGTGGCAAAACAGGCGATGAT
AAAACCATGCTTATTGATTTATGGGCCGCATGTAAAGCCGTAGATTACGCAAAATTGGCTAATGTTTCACATTTTGTTAT
GGTCAGCTCTATTGGCGCTGACGACCCTTCCCAAGGTACAGAAATCATGAAGCCTTACATGGTTGCCAAACATATGGCCG
ATGAACACTTGATAGGCAGTGGGCTAAATTACACCATATTTAGACCTGGCTTATTAACCGATAATAACGCCACAGGTAAA
GTGAAAACCATCAGGCCCAGCAACAAAGAAGATATGACCATTAATCGAGAAGATGTCGCCAGCGTACTGACCTATACAGT
AGGTAAATCTGAGCTAGGTGGGAAAATATTTGAATTATTTAACGGCGAAAAAACCCTCGCTGATATATTAAATTAA

Upstream 100 bases:

>100_bases
CACCATCCATCCTAGATGGCGCTCCAGATAGCTGTTTTTCGATTTTATAAGATCGTTAGCAGCCTGTTCTGCGAGTACCA
CTTTACTAAGGAGAAGATAA

Downstream 100 bases:

>100_bases
TCCATTAAATGGGTAGACATTTTCCTTAACGAGTCCAAGAAACAAAAAAACATCAAGGCCAGTATAGTACTGGCTTTTTT
TATTTGAGATTATATCGGCT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKKTLIIGASGQIGKMTTKQLLADGKTVIALVRDKSKLADISCDKLHIVEGDLENDFSQAFADCDQVIFSAGSGGKTGDD
KTMLIDLWAACKAVDYAKLANVSHFVMVSSIGADDPSQGTEIMKPYMVAKHMADEHLIGSGLNYTIFRPGLLTDNNATGK
VKTIRPSNKEDMTINREDVASVLTYTVGKSELGGKIFELFNGEKTLADILN

Sequences:

>Translated_211_residues
MKKTLIIGASGQIGKMTTKQLLADGKTVIALVRDKSKLADISCDKLHIVEGDLENDFSQAFADCDQVIFSAGSGGKTGDD
KTMLIDLWAACKAVDYAKLANVSHFVMVSSIGADDPSQGTEIMKPYMVAKHMADEHLIGSGLNYTIFRPGLLTDNNATGK
VKTIRPSNKEDMTINREDVASVLTYTVGKSELGGKIFELFNGEKTLADILN
>Mature_211_residues
MKKTLIIGASGQIGKMTTKQLLADGKTVIALVRDKSKLADISCDKLHIVEGDLENDFSQAFADCDQVIFSAGSGGKTGDD
KTMLIDLWAACKAVDYAKLANVSHFVMVSSIGADDPSQGTEIMKPYMVAKHMADEHLIGSGLNYTIFRPGLLTDNNATGK
VKTIRPSNKEDMTINREDVASVLTYTVGKSELGGKIFELFNGEKTLADILN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=194, Percent_Identity=32.4742268041237, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22736; Mature: 22736

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00485 A_DEAMINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIIGASGQIGKMTTKQLLADGKTVIALVRDKSKLADISCDKLHIVEGDLENDFSQA
CCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHCCCCCCEEEEEECCCCHHHHHH
FADCDQVIFSAGSGGKTGDDKTMLIDLWAACKAVDYAKLANVSHFVMVSSIGADDPSQGT
HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCH
EIMKPYMVAKHMADEHLIGSGLNYTIFRPGLLTDNNATGKVKTIRPSNKEDMTINREDVA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCEEEEECCCCCCCCEECHHHHH
SVLTYTVGKSELGGKIFELFNGEKTLADILN
HHHHHHCCCHHHCCHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MKKTLIIGASGQIGKMTTKQLLADGKTVIALVRDKSKLADISCDKLHIVEGDLENDFSQA
CCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHCCCCCCEEEEEECCCCHHHHHH
FADCDQVIFSAGSGGKTGDDKTMLIDLWAACKAVDYAKLANVSHFVMVSSIGADDPSQGT
HHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCH
EIMKPYMVAKHMADEHLIGSGLNYTIFRPGLLTDNNATGKVKTIRPSNKEDMTINREDVA
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCEEEEECCCCCCCCEECHHHHH
SVLTYTVGKSELGGKIFELFNGEKTLADILN
HHHHHHCCCHHHCCHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]