| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946278
Identifier: 119946278
GI number: 119946278
Start: 3240392
End: 3241063
Strand: Reverse
Name: 119946278
Synonym: Ping_2642
Alternate gene names: NA
Gene position: 3241063-3240392 (Counterclockwise)
Preceding gene: 119946279
Following gene: 119946277
Centisome position: 71.08
GC content: 39.73
Gene sequence:
>672_bases ATGAAAATACTTTTTAACAGCTTGGTTTTACTCATCTCTTTAGTTTCATTTCAAATTCAGGCAACTTTAATCAAGTATGA CAATGAAGCGGATTTCAATACAGACATCGCCAGTCTCTCTTCAAATACCGTTGATTTTGATTCGCTGGCGGCGGGCACTC TGATCACTGACGGCAGTGCCATTGACGGCATCACTTTTAACTATTCAATTTTTGGAATGAATCTTTTTGCAGATGATTTA TTTGATACTACATCGCCAGCTAATTATTTAGGTGTCGACAGTGGTGACGGCTCCTTTATTGGAGGAGACAGTTTTACGAT GAGCTTTGCCGCTGCGCAGACTGCGATTGGGCTATTTATTCATAGTGCAGATTTTATTTTTGATGGTGATGTAACTTTAA CAACCAATAATGGCCTGATTGTTGAGCTGAGCGGAAATATTGATACCTACCTGACAGACGGAGAAGCATATTTTATTGGC TTATCCACGAATAACCCTTTAGATGCCTTTACCAGTGTCGTGTTAAGCAGCATAAATGAGTCATTTGCTTTCAATGTGGA TGATATCACCATAGCAAATTCGACGGCGGTACCTGAGCCCGGCACGGGGCTGTTAATGTTGATGGCTGTTGCTGGCTTTT ATTTTAAGAAACAGATTTTTAAAACTAAATAA
Upstream 100 bases:
>100_bases AATATCATTAAGTATATGATTTTATGGTGCGGCATAGATTATGCATCATGTGATTTATGCTCAACCTACATCTTTCAACA TTATCTAGCGGGGTTTATTT
Downstream 100 bases:
>100_bases ACATTATTACTAACCCCTTGCCGGACTTGCTCGGCGAGATAATTCTAACCGTGTTACAGGAGATAATAATGAAGCCATTG ATTAGAAAACTCACATTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKILFNSLVLLISLVSFQIQATLIKYDNEADFNTDIASLSSNTVDFDSLAAGTLITDGSAIDGITFNYSIFGMNLFADDL FDTTSPANYLGVDSGDGSFIGGDSFTMSFAAAQTAIGLFIHSADFIFDGDVTLTTNNGLIVELSGNIDTYLTDGEAYFIG LSTNNPLDAFTSVVLSSINESFAFNVDDITIANSTAVPEPGTGLLMLMAVAGFYFKKQIFKTK
Sequences:
>Translated_223_residues MKILFNSLVLLISLVSFQIQATLIKYDNEADFNTDIASLSSNTVDFDSLAAGTLITDGSAIDGITFNYSIFGMNLFADDL FDTTSPANYLGVDSGDGSFIGGDSFTMSFAAAQTAIGLFIHSADFIFDGDVTLTTNNGLIVELSGNIDTYLTDGEAYFIG LSTNNPLDAFTSVVLSSINESFAFNVDDITIANSTAVPEPGTGLLMLMAVAGFYFKKQIFKTK >Mature_223_residues MKILFNSLVLLISLVSFQIQATLIKYDNEADFNTDIASLSSNTVDFDSLAAGTLITDGSAIDGITFNYSIFGMNLFADDL FDTTSPANYLGVDSGDGSFIGGDSFTMSFAAAQTAIGLFIHSADFIFDGDVTLTTNNGLIVELSGNIDTYLTDGEAYFIG LSTNNPLDAFTSVVLSSINESFAFNVDDITIANSTAVPEPGTGLLMLMAVAGFYFKKQIFKTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23769; Mature: 23769
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILFNSLVLLISLVSFQIQATLIKYDNEADFNTDIASLSSNTVDFDSLAAGTLITDGSA CCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHCCCEEEECCCC IDGITFNYSIFGMNLFADDLFDTTSPANYLGVDSGDGSFIGGDSFTMSFAAAQTAIGLFI CCCEEEEEEEEEEEHHHHHHHCCCCCCCEEECCCCCCCEECCCCEEEHHHHHHHHEEEEE HSADFIFDGDVTLTTNNGLIVELSGNIDTYLTDGEAYFIGLSTNNPLDAFTSVVLSSINE ECCCEEEECCEEEEECCCEEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCH SFAFNVDDITIANSTAVPEPGTGLLMLMAVAGFYFKKQIFKTK HEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKILFNSLVLLISLVSFQIQATLIKYDNEADFNTDIASLSSNTVDFDSLAAGTLITDGSA CCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHCCCEEEECCCC IDGITFNYSIFGMNLFADDLFDTTSPANYLGVDSGDGSFIGGDSFTMSFAAAQTAIGLFI CCCEEEEEEEEEEEHHHHHHHCCCCCCCEEECCCCCCCEECCCCEEEHHHHHHHHEEEEE HSADFIFDGDVTLTTNNGLIVELSGNIDTYLTDGEAYFIGLSTNNPLDAFTSVVLSSINE ECCCEEEECCEEEEECCCEEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCH SFAFNVDDITIANSTAVPEPGTGLLMLMAVAGFYFKKQIFKTK HEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA