| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946275
Identifier: 119946275
GI number: 119946275
Start: 3237617
End: 3238207
Strand: Reverse
Name: 119946275
Synonym: Ping_2639
Alternate gene names: NA
Gene position: 3238207-3237617 (Counterclockwise)
Preceding gene: 119946276
Following gene: 119946274
Centisome position: 71.02
GC content: 38.92
Gene sequence:
>591_bases ATGAAAAGACTGATTCTTGTCACATCACCCCCTGCGAGTGGTAAAACCTATATTTCGAAACAGTTGGCTAAAGGGCTTAA GCATGTTGTTTATCTGGATAAAGATACCCTTATTGTGTTATCCCATCAGATTTTTAAGGTTGCTAACGAGCAAGAAAATC GGAGCTCCGATTTTTTTGAAGAGCATATTCGCAACTACGAATATGCTGCAGTTTTAGCGCTGGCTATGGAAGCTTTGGAA TATGATGACATAGTGTTAATTAACGCGCCTTTCACTCGAGAAATAAGAGATACAGTTTATATCGATAACTTGAAAAGTAA GCTGGTGGAAAAAAATGTGCGCCTGACCGTGGTATGGGTTATGACAGATATCGATGTTATTAAAAACCGTATGATTAAGA GAAATTCATCTAGAGATACCTGGAAATTGGAACATTGGGATGAGTATATTAAAGGTGTTGATTTTTCTATTCCACAGAGC ATTGATAACCCGGAGGTTATCGATGATTTACTGCTATTTCGCAATTCCAATGAAGACCAGTACCGCCAGTCTATGCAAGA GGTACTGGGGGTTTTAGAGGCAAGTCATTAG
Upstream 100 bases:
>100_bases TATTTTACATACACAGTATAAATAGCAGAGCAGGGTCAACGTTATAACTGGCCTGATTTTAAGAAGATATTAAACCGTGA TTGTTAAATAAGGAATAATA
Downstream 100 bases:
>100_bases AACGTTATATGTATTATTTAAGGTGCACTATTTGAGGAAAACCAATCCTTTTATTAATAAACTGATTTTTTGATATTAGG TTTTGATATTAGGTTTTGGT
Product: P-loop ATPase
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKRLILVTSPPASGKTYISKQLAKGLKHVVYLDKDTLIVLSHQIFKVANEQENRSSDFFEEHIRNYEYAAVLALAMEALE YDDIVLINAPFTREIRDTVYIDNLKSKLVEKNVRLTVVWVMTDIDVIKNRMIKRNSSRDTWKLEHWDEYIKGVDFSIPQS IDNPEVIDDLLLFRNSNEDQYRQSMQEVLGVLEASH
Sequences:
>Translated_196_residues MKRLILVTSPPASGKTYISKQLAKGLKHVVYLDKDTLIVLSHQIFKVANEQENRSSDFFEEHIRNYEYAAVLALAMEALE YDDIVLINAPFTREIRDTVYIDNLKSKLVEKNVRLTVVWVMTDIDVIKNRMIKRNSSRDTWKLEHWDEYIKGVDFSIPQS IDNPEVIDDLLLFRNSNEDQYRQSMQEVLGVLEASH >Mature_196_residues MKRLILVTSPPASGKTYISKQLAKGLKHVVYLDKDTLIVLSHQIFKVANEQENRSSDFFEEHIRNYEYAAVLALAMEALE YDDIVLINAPFTREIRDTVYIDNLKSKLVEKNVRLTVVWVMTDIDVIKNRMIKRNSSRDTWKLEHWDEYIKGVDFSIPQS IDNPEVIDDLLLFRNSNEDQYRQSMQEVLGVLEASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22860; Mature: 22860
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLILVTSPPASGKTYISKQLAKGLKHVVYLDKDTLIVLSHQIFKVANEQENRSSDFFE CCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCEEEEHHHHHHHHHCCCCCCCHHHHH EHIRNYEYAAVLALAMEALEYDDIVLINAPFTREIRDTVYIDNLKSKLVEKNVRLTVVWV HHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE MTDIDVIKNRMIKRNSSRDTWKLEHWDEYIKGVDFSIPQSIDNPEVIDDLLLFRNSNEDQ EHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH YRQSMQEVLGVLEASH HHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLILVTSPPASGKTYISKQLAKGLKHVVYLDKDTLIVLSHQIFKVANEQENRSSDFFE CCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCEEEEHHHHHHHHHCCCCCCCHHHHH EHIRNYEYAAVLALAMEALEYDDIVLINAPFTREIRDTVYIDNLKSKLVEKNVRLTVVWV HHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE MTDIDVIKNRMIKRNSSRDTWKLEHWDEYIKGVDFSIPQSIDNPEVIDDLLLFRNSNEDQ EHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH YRQSMQEVLGVLEASH HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA