| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946222
Identifier: 119946222
GI number: 119946222
Start: 3165214
End: 3165816
Strand: Reverse
Name: 119946222
Synonym: Ping_2583
Alternate gene names: NA
Gene position: 3165816-3165214 (Counterclockwise)
Preceding gene: 119946223
Following gene: 119946219
Centisome position: 69.43
GC content: 34.66
Gene sequence:
>603_bases ATGAAAATAGAAAAACGAGGTGATTATCTTAAAATGTCAAAAGCACAACTCGTGGACGACAGGGTTGAAATTATCAAAAA GGCCCTAAAGACTATTAAAAAACATCGAGGTGAAAGAATAACCCCATTTTCAGAGCGGCTATCTGAGCATATAAAATCAG AGTTTAATGAAAATATCGTGTCAACCACGTTAAGAACAAACAAGGATTACAGGAGACTGGTTGATGGATTTCTCGATAAA GGAGCTGTTGTAAAAGATTCATCTGTTAGGCAAGAGCTAATGATAGAACGCTCATCAGTAAGGCTATTAAAAAAGCAAGT GGCAACACTAGAACAAGAACTTTCAAAGCAACTATCTGAGGTAAGCCTACTGGAAGATAAAAACATACGCATTAGAACAC AAAAAGAGCCTGTGATAGATGATAGTAGTGCATTCTCAATTATTATGAAGCTATTAAATACTCTTGGTATGGACTCAATC AAAATAACAGAAGATGTTGTTATTGATACAGCATCTATAATTCCAAAAACATTATTTACAAAAGAAGATTGTCCTGAATT CTTCGAGTGGTACCTTAAAAACACAAAGGCACATCTGATATAG
Upstream 100 bases:
>100_bases TAGCTGAACTTGAAGGAAAAACTGTTTTGGAATTAATGGAAAATACCAGAATAACAGAAGACAAAATCGGACTAGAACTT TTTGAGTAGGAGGGTAAATC
Downstream 100 bases:
>100_bases CCTAATGCGCCTCCTTGGTGAACTAAAGTCTTGCACATGAAAAAGTTCATGGACTTAATGTTTTTTATTGGCTTAAGTCC ATAGCAAAGTAAGCGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKIEKRGDYLKMSKAQLVDDRVEIIKKALKTIKKHRGERITPFSERLSEHIKSEFNENIVSTTLRTNKDYRRLVDGFLDK GAVVKDSSVRQELMIERSSVRLLKKQVATLEQELSKQLSEVSLLEDKNIRIRTQKEPVIDDSSAFSIIMKLLNTLGMDSI KITEDVVIDTASIIPKTLFTKEDCPEFFEWYLKNTKAHLI
Sequences:
>Translated_200_residues MKIEKRGDYLKMSKAQLVDDRVEIIKKALKTIKKHRGERITPFSERLSEHIKSEFNENIVSTTLRTNKDYRRLVDGFLDK GAVVKDSSVRQELMIERSSVRLLKKQVATLEQELSKQLSEVSLLEDKNIRIRTQKEPVIDDSSAFSIIMKLLNTLGMDSI KITEDVVIDTASIIPKTLFTKEDCPEFFEWYLKNTKAHLI >Mature_200_residues MKIEKRGDYLKMSKAQLVDDRVEIIKKALKTIKKHRGERITPFSERLSEHIKSEFNENIVSTTLRTNKDYRRLVDGFLDK GAVVKDSSVRQELMIERSSVRLLKKQVATLEQELSKQLSEVSLLEDKNIRIRTQKEPVIDDSSAFSIIMKLLNTLGMDSI KITEDVVIDTASIIPKTLFTKEDCPEFFEWYLKNTKAHLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23171; Mature: 23171
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEKRGDYLKMSKAQLVDDRVEIIKKALKTIKKHRGERITPFSERLSEHIKSEFNENIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH STTLRTNKDYRRLVDGFLDKGAVVKDSSVRQELMIERSSVRLLKKQVATLEQELSKQLSE HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLLEDKNIRIRTQKEPVIDDSSAFSIIMKLLNTLGMDSIKITEDVVIDTASIIPKTLFT HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHC KEDCPEFFEWYLKNTKAHLI CCCCHHHHHHHHHCCHHCCC >Mature Secondary Structure MKIEKRGDYLKMSKAQLVDDRVEIIKKALKTIKKHRGERITPFSERLSEHIKSEFNENIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH STTLRTNKDYRRLVDGFLDKGAVVKDSSVRQELMIERSSVRLLKKQVATLEQELSKQLSE HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLLEDKNIRIRTQKEPVIDDSSAFSIIMKLLNTLGMDSIKITEDVVIDTASIIPKTLFT HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHC KEDCPEFFEWYLKNTKAHLI CCCCHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA