| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946221
Identifier: 119946221
GI number: 119946221
Start: 3164136
End: 3164549
Strand: Direct
Name: 119946221
Synonym: Ping_2581
Alternate gene names: NA
Gene position: 3164136-3164549 (Clockwise)
Preceding gene: 119946220
Following gene: 119946225
Centisome position: 69.4
GC content: 39.86
Gene sequence:
>414_bases GTGGTAATAGGAAAATTGCCTAACAAACGGCTGCACCGGAAAAATTTCCACTCTCACCTTTTTTGCATAAAAGCACGCAA AAAAGCCGCCATCAAAAATTTTATCGGTGAGACGGGCTTTATGTGTAAAAAAGGAGATCGCATCATGAAATTTAGAAAAC TAATTCTTATTGCCTTATTTGCTATTCCTGCTGTTTCATTTGCTTGGGATGGTTACGACTATGAGTCTGGAAACTATGTA GAAATTGACAAGGGCAACTTGGTCAGAGAAGGTGAAGAAATTGAGTACTACGATTACGGCAGTGGCGAATATCGTTACGG TGAAGTTCAAGATGTTCAAAGTTCAGGAAGTGGCGCAGAAGTCGAGATATATGATTATGACTCTGGCGAATACCGCACAT TCGAAATGGATTAA
Upstream 100 bases:
>100_bases TTGGCTCGGGCTATGATGATTACTCTACATCAGGAGTAAATGAGGGGTCGATCGGATCAGGATCCGATGATTACTCAAAT CCAGGGGTTAATGAAGGTTC
Downstream 100 bases:
>100_bases ACATATAACAAGTGCAGGCAAGGAAGGCTCCTGACGTCGCGGCCCTACTGCAAGCTGTTTGCTATCAGCACGATTCAAAA ACTTTATGCGATAGAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVIGKLPNKRLHRKNFHSHLFCIKARKKAAIKNFIGETGFMCKKGDRIMKFRKLILIALFAIPAVSFAWDGYDYESGNYV EIDKGNLVREGEEIEYYDYGSGEYRYGEVQDVQSSGSGAEVEIYDYDSGEYRTFEMD
Sequences:
>Translated_137_residues MVIGKLPNKRLHRKNFHSHLFCIKARKKAAIKNFIGETGFMCKKGDRIMKFRKLILIALFAIPAVSFAWDGYDYESGNYV EIDKGNLVREGEEIEYYDYGSGEYRYGEVQDVQSSGSGAEVEIYDYDSGEYRTFEMD >Mature_137_residues MVIGKLPNKRLHRKNFHSHLFCIKARKKAAIKNFIGETGFMCKKGDRIMKFRKLILIALFAIPAVSFAWDGYDYESGNYV EIDKGNLVREGEEIEYYDYGSGEYRYGEVQDVQSSGSGAEVEIYDYDSGEYRTFEMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15839; Mature: 15839
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGKLPNKRLHRKNFHSHLFCIKARKKAAIKNFIGETGFMCKKGDRIMKFRKLILIALF CCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH AIPAVSFAWDGYDYESGNYVEIDKGNLVREGEEIEYYDYGSGEYRYGEVQDVQSSGSGAE HHHHHEEEECCEECCCCCEEEECCCCEEECCCEEEEEECCCCCEECCCCEECCCCCCCCE VEIYDYDSGEYRTFEMD EEEEECCCCCEEEEECC >Mature Secondary Structure MVIGKLPNKRLHRKNFHSHLFCIKARKKAAIKNFIGETGFMCKKGDRIMKFRKLILIALF CCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH AIPAVSFAWDGYDYESGNYVEIDKGNLVREGEEIEYYDYGSGEYRYGEVQDVQSSGSGAE HHHHHEEEECCEECCCCCEEEECCCCEEECCCEEEEEECCCCCEECCCCEECCCCCCCCE VEIYDYDSGEYRTFEMD EEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA