| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946212
Identifier: 119946212
GI number: 119946212
Start: 3154603
End: 3155799
Strand: Reverse
Name: 119946212
Synonym: Ping_2572
Alternate gene names: NA
Gene position: 3155799-3154603 (Counterclockwise)
Preceding gene: 119946213
Following gene: 119946208
Centisome position: 69.21
GC content: 35.25
Gene sequence:
>1197_bases ATGACAACTGAATTACAAAAAGGTGGTAATTGCGCTTTAGCATGTTCTATAGGCACTATTTTTATTAAACACCCAACTTC AGCAGCAATAGATATAAATTTAACTGCATTTTTGCTTGATGATTCAGGAAAAGTAAAAAATGATAATGGTATGGTTTTTT TTAATCAACCGAGTGACATAGCCAAAACCGCACAATTCAAACCTCCCATAAATGAGCGGGATATAACCATACATCAAATT GATTTTTCTCTTAATACTGCTTTAACGGATATTACTAAAATAGCAATTACCTTAACTGAAGATAATGGTATTGGTTTTTC TGATTTAAACTTAACAGCTGAAATTCATTGTAACGGCACGGTTACTTTACTAACACCTCAAGCGTTTAGCACTGAAAAAG GCATTATCGTTGCAGAAATATACAGTCGTAATAAGCAGATCAAAGTTCGCTCTATTTGGCAGGGCTTTGCTACTGGGTTA ACAGGTTTGTGTGAACATTATGGTATTGAAGTCGATAACAAAGAAGAGCCACAAACCCAACAAGTTAAAAAGGTTAATTC TAGTGTTAATTTGGAAAAAGTCAGCGGAAAAATAGATTTATCTAAAGGTAAAAAAGCCATACTTATTGAAAAAACAGCAG AGATCACTGCATCTATTTCCTGGGACAGCAGTACCGATTATGATGTATATGCTTTGGTTTATCTCAGTAATGGCGAGCAA ATTGATGTTGCCATGTTTGGCGCTAATGGCGTTCCAAAGCTTCAAAACTATAATAAAGGGGCAGTGCATCATTTAGGTGA TGTTGGCTGCGCTAAAAAAGGTTTATTCCAGAAAAAAAATCAGAGCAGCAAAGAAGAAATAAAAATCCGCCTAAATGATA CAATTAAAGCTGTCGTACCAGTTGCTTACTCAGCTCAATCTAATGGTACTGGCTCATTCCATAAATATAAAGTGTCAATG TTGATTGATAATCACAATGGTACAGAAATTAATATTCCAGCTGAAAATGCGAATAAAGATAATAAGATATATACCTGCGT TCCAGGCATCATTGTCAATACGCCAGATGGAGTGTTAATTAAAGCGTTAGAATACTACAGCAAACCCGGTTCCGAAAATC GTCCTAGTTTAGAAATGGACCGAAACGGTATTGTAAATGTACTTATGGATTGTGGGCCTGTGAATGATTATAAGTAA
Upstream 100 bases:
>100_bases TAAAATGGACATGGAAAGTATTGGACAGATTGCGACTGTCTCTTTTTTAATAAAAAATCAGCAACCTACATAAAAAATAT TATATAAAAGAGGTGAAAAA
Downstream 100 bases:
>100_bases GGCCAATTGGTAAAATTCAAGAAATTCTTTGGCAGATTTAACCCTGAAGTACATCGCCATTAATCAGCCATAGCTACCAT ATGTTCAGCCATTAATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transport Associated Protein; Tellurium Resistance Protein; Tellurium Resistance Protein TerA; Tellurium Resistance; Resistance Protein; Stress-Induced Protein; Tellurium Resistance Protein Tera; Tellurite Resistance Protein; Stress Protein Tellurium Resistance Protein TerD; Tellurite Resistance Protein Terf
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTTELQKGGNCALACSIGTIFIKHPTSAAIDINLTAFLLDDSGKVKNDNGMVFFNQPSDIAKTAQFKPPINERDITIHQI DFSLNTALTDITKIAITLTEDNGIGFSDLNLTAEIHCNGTVTLLTPQAFSTEKGIIVAEIYSRNKQIKVRSIWQGFATGL TGLCEHYGIEVDNKEEPQTQQVKKVNSSVNLEKVSGKIDLSKGKKAILIEKTAEITASISWDSSTDYDVYALVYLSNGEQ IDVAMFGANGVPKLQNYNKGAVHHLGDVGCAKKGLFQKKNQSSKEEIKIRLNDTIKAVVPVAYSAQSNGTGSFHKYKVSM LIDNHNGTEINIPAENANKDNKIYTCVPGIIVNTPDGVLIKALEYYSKPGSENRPSLEMDRNGIVNVLMDCGPVNDYK
Sequences:
>Translated_398_residues MTTELQKGGNCALACSIGTIFIKHPTSAAIDINLTAFLLDDSGKVKNDNGMVFFNQPSDIAKTAQFKPPINERDITIHQI DFSLNTALTDITKIAITLTEDNGIGFSDLNLTAEIHCNGTVTLLTPQAFSTEKGIIVAEIYSRNKQIKVRSIWQGFATGL TGLCEHYGIEVDNKEEPQTQQVKKVNSSVNLEKVSGKIDLSKGKKAILIEKTAEITASISWDSSTDYDVYALVYLSNGEQ IDVAMFGANGVPKLQNYNKGAVHHLGDVGCAKKGLFQKKNQSSKEEIKIRLNDTIKAVVPVAYSAQSNGTGSFHKYKVSM LIDNHNGTEINIPAENANKDNKIYTCVPGIIVNTPDGVLIKALEYYSKPGSENRPSLEMDRNGIVNVLMDCGPVNDYK >Mature_397_residues TTELQKGGNCALACSIGTIFIKHPTSAAIDINLTAFLLDDSGKVKNDNGMVFFNQPSDIAKTAQFKPPINERDITIHQID FSLNTALTDITKIAITLTEDNGIGFSDLNLTAEIHCNGTVTLLTPQAFSTEKGIIVAEIYSRNKQIKVRSIWQGFATGLT GLCEHYGIEVDNKEEPQTQQVKKVNSSVNLEKVSGKIDLSKGKKAILIEKTAEITASISWDSSTDYDVYALVYLSNGEQI DVAMFGANGVPKLQNYNKGAVHHLGDVGCAKKGLFQKKNQSSKEEIKIRLNDTIKAVVPVAYSAQSNGTGSFHKYKVSML IDNHNGTEINIPAENANKDNKIYTCVPGIIVNTPDGVLIKALEYYSKPGSENRPSLEMDRNGIVNVLMDCGPVNDYK
Specific function: Unknown
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43410; Mature: 43279
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTELQKGGNCALACSIGTIFIKHPTSAAIDINLTAFLLDDSGKVKNDNGMVFFNQPSDI CCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEECCCCEEEEECCCCH AKTAQFKPPINERDITIHQIDFSLNTALTDITKIAITLTEDNGIGFSDLNLTAEIHCNGT HHHCCCCCCCCCCCEEEEEEEEEHHHHHEEEEEEEEEEECCCCCCEECCEEEEEEEECEE VTLLTPQAFSTEKGIIVAEIYSRNKQIKVRSIWQGFATGLTGLCEHYGIEVDNKEEPQTQ EEEEECCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH QVKKVNSSVNLEKVSGKIDLSKGKKAILIEKTAEITASISWDSSTDYDVYALVYLSNGEQ HHHHHCCCCCEEEECCEEEECCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCE IDVAMFGANGVPKLQNYNKGAVHHLGDVGCAKKGLFQKKNQSSKEEIKIRLNDTIKAVVP EEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHCHHHCCCCCCCEEEEEEECCCEEEEEE VAYSAQSNGTGSFHKYKVSMLIDNHNGTEINIPAENANKDNKIYTCVPGIIVNTPDGVLI EEEECCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCEEEECCCCHHH KALEYYSKPGSENRPSLEMDRNGIVNVLMDCGPVNDYK HHHHHHCCCCCCCCCCEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure TTELQKGGNCALACSIGTIFIKHPTSAAIDINLTAFLLDDSGKVKNDNGMVFFNQPSDI CCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEECCCCEEEEECCCCH AKTAQFKPPINERDITIHQIDFSLNTALTDITKIAITLTEDNGIGFSDLNLTAEIHCNGT HHHCCCCCCCCCCCEEEEEEEEEHHHHHEEEEEEEEEEECCCCCCEECCEEEEEEEECEE VTLLTPQAFSTEKGIIVAEIYSRNKQIKVRSIWQGFATGLTGLCEHYGIEVDNKEEPQTQ EEEEECCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH QVKKVNSSVNLEKVSGKIDLSKGKKAILIEKTAEITASISWDSSTDYDVYALVYLSNGEQ HHHHHCCCCCEEEECCEEEECCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCE IDVAMFGANGVPKLQNYNKGAVHHLGDVGCAKKGLFQKKNQSSKEEIKIRLNDTIKAVVP EEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHCHHHCCCCCCCEEEEEEECCCEEEEEE VAYSAQSNGTGSFHKYKVSMLIDNHNGTEINIPAENANKDNKIYTCVPGIIVNTPDGVLI EEEECCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCEEEECCCCHHH KALEYYSKPGSENRPSLEMDRNGIVNVLMDCGPVNDYK HHHHHHCCCCCCCCCCEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA