| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946211
Identifier: 119946211
GI number: 119946211
Start: 3153025
End: 3154227
Strand: Direct
Name: 119946211
Synonym: Ping_2571
Alternate gene names: NA
Gene position: 3153025-3154227 (Clockwise)
Preceding gene: 119946210
Following gene: 119946220
Centisome position: 69.15
GC content: 31.75
Gene sequence:
>1203_bases ATGCCCATATATTTTAAAATGTTAACTACAACGCTTTTTTTTACTATTGCCCTACCAATCTATGCACAAGTATACACTTG TGAAGTAAATGGAAAAACAACATTTACAGATCAAATCTGTGAATATGAAGAGCAAGTAGTAATTAATTCGAATAAAGTTT CAAATCAAAAATCATCTGAACAACTTAAATATATATCTTTTAAGTATGGTGGCTCCGCATGCCCTGAGAAAAAATATTGG GAAGCATTCATCGATAAAAGTGAAACTTATGATATGAAAGACTTTAATAAAAATTGTTTTTATCTTAGAGAGGGGAATAT TGTTTATAGTTTTTTAAACCGTATTTTTTATAAAAATAGAGAATTAGTACAAGTTAAATCTAGTGATGGGAAATTATTAT GGTTAGAGCTTGCAGGTGTTGAAGAACCTGTGTCCAGTACTAATCAAAAACCTATGCCATGGTCAACACTATTAAGAACT CAGAATGGTAAAATAATCGACATTGGTGGTTATAGTAAACATAAAATTAAAAAGGATATAGAGTCTGTTAGTAAATCTAT AACTACTGGATTTAAGCTTAAAATTAAAGCCGATGAGTATAAAGGTATTTGGCCTTTTCCTTTAGATAGTGGAGGAACCT TATTTTGTAAAAACATTGATAGTAGACGAAAAGCAGTATGGTTAAATGGAATACATTCAACTTATGCATTAAATGGTCAA GCAATGAACTGGATGAAAAAAAATAACTTCATAGGAATTGATGGAGGTTTAACTAAAATTGGAAGGGAGCATTCAAATAA CTTTAAAGGATTATCAAAATTAATTAGTGATGGGTTGACGTTGTGCAATGAAAATCTAAATTTTAAATATGAATCGGTTG ACCAATACGTGGCAAAAGCACTAAAGAGATGGGGGCCAAAGAATATCTCCACCAATAAAAAAATACTTAAATCCTTGGGA ATTTACTCGGGCCCAATAAATTCGGTTATTGATCTAAATTATGCACAAAAGGTCACATCTGCTTATTACCGGTATCTGGA GAAATGCAAAAATGGTTCTGTTTCAGGAACAAATTGCTCCGCATACAAATACATGCTTAAAGCTGGTAGTACCAATTATC GCCCACCAGTGAGTGCAATATTTTATGAATTGTCATCAAGAAATTTGCAAGCTGAAGCTGGCAAACTGAAAGTTGGAGAT TAA
Upstream 100 bases:
>100_bases AGAAGTGGCAAAAGCGAGTTACGAACATTTTAAGTGTGACTTGAAAATTTAGTCAGCTATTAAGGCGTTGGTATGTACTT GTGATTTATAGGAATCAGAT
Downstream 100 bases:
>100_bases GGTTAAAAAAATGTAACTAATAAGGATAGGTCGTGTGAGCCAGCCTTATAAACACCTAACACACCGTTATGTATTTATTT TCCATAACTCCCGATGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPIYFKMLTTTLFFTIALPIYAQVYTCEVNGKTTFTDQICEYEEQVVINSNKVSNQKSSEQLKYISFKYGGSACPEKKYW EAFIDKSETYDMKDFNKNCFYLREGNIVYSFLNRIFYKNRELVQVKSSDGKLLWLELAGVEEPVSSTNQKPMPWSTLLRT QNGKIIDIGGYSKHKIKKDIESVSKSITTGFKLKIKADEYKGIWPFPLDSGGTLFCKNIDSRRKAVWLNGIHSTYALNGQ AMNWMKKNNFIGIDGGLTKIGREHSNNFKGLSKLISDGLTLCNENLNFKYESVDQYVAKALKRWGPKNISTNKKILKSLG IYSGPINSVIDLNYAQKVTSAYYRYLEKCKNGSVSGTNCSAYKYMLKAGSTNYRPPVSAIFYELSSRNLQAEAGKLKVGD
Sequences:
>Translated_400_residues MPIYFKMLTTTLFFTIALPIYAQVYTCEVNGKTTFTDQICEYEEQVVINSNKVSNQKSSEQLKYISFKYGGSACPEKKYW EAFIDKSETYDMKDFNKNCFYLREGNIVYSFLNRIFYKNRELVQVKSSDGKLLWLELAGVEEPVSSTNQKPMPWSTLLRT QNGKIIDIGGYSKHKIKKDIESVSKSITTGFKLKIKADEYKGIWPFPLDSGGTLFCKNIDSRRKAVWLNGIHSTYALNGQ AMNWMKKNNFIGIDGGLTKIGREHSNNFKGLSKLISDGLTLCNENLNFKYESVDQYVAKALKRWGPKNISTNKKILKSLG IYSGPINSVIDLNYAQKVTSAYYRYLEKCKNGSVSGTNCSAYKYMLKAGSTNYRPPVSAIFYELSSRNLQAEAGKLKVGD >Mature_399_residues PIYFKMLTTTLFFTIALPIYAQVYTCEVNGKTTFTDQICEYEEQVVINSNKVSNQKSSEQLKYISFKYGGSACPEKKYWE AFIDKSETYDMKDFNKNCFYLREGNIVYSFLNRIFYKNRELVQVKSSDGKLLWLELAGVEEPVSSTNQKPMPWSTLLRTQ NGKIIDIGGYSKHKIKKDIESVSKSITTGFKLKIKADEYKGIWPFPLDSGGTLFCKNIDSRRKAVWLNGIHSTYALNGQA MNWMKKNNFIGIDGGLTKIGREHSNNFKGLSKLISDGLTLCNENLNFKYESVDQYVAKALKRWGPKNISTNKKILKSLGI YSGPINSVIDLNYAQKVTSAYYRYLEKCKNGSVSGTNCSAYKYMLKAGSTNYRPPVSAIFYELSSRNLQAEAGKLKVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45429; Mature: 45297
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYFKMLTTTLFFTIALPIYAQVYTCEVNGKTTFTDQICEYEEQVVINSNKVSNQKSSE CCEEHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCCCCCCCC QLKYISFKYGGSACPEKKYWEAFIDKSETYDMKDFNKNCFYLREGNIVYSFLNRIFYKNR CEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHCCC ELVQVKSSDGKLLWLELAGVEEPVSSTNQKPMPWSTLLRTQNGKIIDIGGYSKHKIKKDI EEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHH ESVSKSITTGFKLKIKADEYKGIWPFPLDSGGTLFCKNIDSRRKAVWLNGIHSTYALNGQ HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEECCH AMNWMKKNNFIGIDGGLTKIGREHSNNFKGLSKLISDGLTLCNENLNFKYESVDQYVAKA HHHHHHCCCEEEECCCHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHH LKRWGPKNISTNKKILKSLGIYSGPINSVIDLNYAQKVTSAYYRYLEKCKNGSVSGTNCS HHHCCCCCCCCHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHH AYKYMLKAGSTNYRPPVSAIFYELSSRNLQAEAGKLKVGD HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCC >Mature Secondary Structure PIYFKMLTTTLFFTIALPIYAQVYTCEVNGKTTFTDQICEYEEQVVINSNKVSNQKSSE CEEHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCCCCCCCC QLKYISFKYGGSACPEKKYWEAFIDKSETYDMKDFNKNCFYLREGNIVYSFLNRIFYKNR CEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHCCC ELVQVKSSDGKLLWLELAGVEEPVSSTNQKPMPWSTLLRTQNGKIIDIGGYSKHKIKKDI EEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHH ESVSKSITTGFKLKIKADEYKGIWPFPLDSGGTLFCKNIDSRRKAVWLNGIHSTYALNGQ HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEECCH AMNWMKKNNFIGIDGGLTKIGREHSNNFKGLSKLISDGLTLCNENLNFKYESVDQYVAKA HHHHHHCCCEEEECCCHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHH LKRWGPKNISTNKKILKSLGIYSGPINSVIDLNYAQKVTSAYYRYLEKCKNGSVSGTNCS HHHCCCCCCCCHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHH AYKYMLKAGSTNYRPPVSAIFYELSSRNLQAEAGKLKVGD HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA