| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946208
Identifier: 119946208
GI number: 119946208
Start: 3147625
End: 3148353
Strand: Reverse
Name: 119946208
Synonym: Ping_2568
Alternate gene names: NA
Gene position: 3148353-3147625 (Counterclockwise)
Preceding gene: 119946212
Following gene: 119946207
Centisome position: 69.05
GC content: 38.41
Gene sequence:
>729_bases GTGCATAGGTATGTAATTAAACAGTGCAAAATAATTGTAAGTATTATTGCTATTCTTTACTCATCTGCCGGCATAACTGC TGAAATTGTCAAAATGAGTAAGAGCGGGATTTGTCATGATAGTAGTAGCTCTTATTATTCGCGTACAAAGAGTTTTACAG CTTTTGATAGCTTGCAACAGTGCTTAGATTCAGGCGGCCGATTAACAAAAGAAAAACAACAAAGTAAAGCAACTCAAGTT GCAGATAATAGTTATGATAGAGATAAGTTTAATCATTGGATTGATAGTGACCATGATTGCTTAAACACGCGGCATGAATT GCTGCTGAAGTTATCCACTGGCACTATCGACTATGGGGAGAATAAATGTTTAGTAGAGAGCGGTAAATGGCTAGATCCTT ATACAGGAAAAACCTTTTATAACTCCCGTGATCTTGATGTTGACCACCTCATACCCCTTAAATGGGCATGGCTTCATGGC GCTGATAGTTGGACTGCTGAGAAAAGGAAGACATTCGCAAATGATGACTCCAATCTTTTCGCTGTAGAACTAAGTGTAAA TCGTCAGAAAGGAGCTAAAGGACCTTTGGAATGGTTGCCGCCTAATGAAGCCTTTCAGTGCCAGTATATCGTTCGTTTTA AACGTATCGCTTTAAACTATGGATTGGAATTTACCAAACATGAGACTGTAGAGCTAAGTCAACTTCAAAAGACTAAGTGT GGAAAATAA
Upstream 100 bases:
>100_bases TAAGGTATCATTTATTGCTACCAAGCAGTTTGGGGATGAGCTACAAGCTTTATTACTGAGGTAATGTGAGCACAAATCAC GATAAAAAGGAGTTTACACC
Downstream 100 bases:
>100_bases TAAGCTAAAAAAAGTAGCTGCTTAGTATTAATAAGTGACTTCTTTGGTGTAGGAATAGCATTGACTATAAATTATGTATG GCAGTTATTAAGTGCTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase; Excalibur Domain Protein; Conserved Membrane Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MHRYVIKQCKIIVSIIAILYSSAGITAEIVKMSKSGICHDSSSSYYSRTKSFTAFDSLQQCLDSGGRLTKEKQQSKATQV ADNSYDRDKFNHWIDSDHDCLNTRHELLLKLSTGTIDYGENKCLVESGKWLDPYTGKTFYNSRDLDVDHLIPLKWAWLHG ADSWTAEKRKTFANDDSNLFAVELSVNRQKGAKGPLEWLPPNEAFQCQYIVRFKRIALNYGLEFTKHETVELSQLQKTKC GK
Sequences:
>Translated_242_residues MHRYVIKQCKIIVSIIAILYSSAGITAEIVKMSKSGICHDSSSSYYSRTKSFTAFDSLQQCLDSGGRLTKEKQQSKATQV ADNSYDRDKFNHWIDSDHDCLNTRHELLLKLSTGTIDYGENKCLVESGKWLDPYTGKTFYNSRDLDVDHLIPLKWAWLHG ADSWTAEKRKTFANDDSNLFAVELSVNRQKGAKGPLEWLPPNEAFQCQYIVRFKRIALNYGLEFTKHETVELSQLQKTKC GK >Mature_242_residues MHRYVIKQCKIIVSIIAILYSSAGITAEIVKMSKSGICHDSSSSYYSRTKSFTAFDSLQQCLDSGGRLTKEKQQSKATQV ADNSYDRDKFNHWIDSDHDCLNTRHELLLKLSTGTIDYGENKCLVESGKWLDPYTGKTFYNSRDLDVDHLIPLKWAWLHG ADSWTAEKRKTFANDDSNLFAVELSVNRQKGAKGPLEWLPPNEAFQCQYIVRFKRIALNYGLEFTKHETVELSQLQKTKC GK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27660; Mature: 27660
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRYVIKQCKIIVSIIAILYSSAGITAEIVKMSKSGICHDSSSSYYSRTKSFTAFDSLQQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHH CLDSGGRLTKEKQQSKATQVADNSYDRDKFNHWIDSDHDCLNTRHELLLKLSTGTIDYGE HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHEEEEECCCCEECCC NKCLVESGKWLDPYTGKTFYNSRDLDVDHLIPLKWAWLHGADSWTAEKRKTFANDDSNLF CEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCEE AVELSVNRQKGAKGPLEWLPPNEAFQCQYIVRFKRIALNYGLEFTKHETVELSQLQKTKC EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCC GK CC >Mature Secondary Structure MHRYVIKQCKIIVSIIAILYSSAGITAEIVKMSKSGICHDSSSSYYSRTKSFTAFDSLQQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHH CLDSGGRLTKEKQQSKATQVADNSYDRDKFNHWIDSDHDCLNTRHELLLKLSTGTIDYGE HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHEEEEECCCCEECCC NKCLVESGKWLDPYTGKTFYNSRDLDVDHLIPLKWAWLHGADSWTAEKRKTFANDDSNLF CEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCEE AVELSVNRQKGAKGPLEWLPPNEAFQCQYIVRFKRIALNYGLEFTKHETVELSQLQKTKC EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA