| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946203
Identifier: 119946203
GI number: 119946203
Start: 3138207
End: 3139364
Strand: Direct
Name: 119946203
Synonym: Ping_2563
Alternate gene names: NA
Gene position: 3138207-3139364 (Clockwise)
Preceding gene: 119946202
Following gene: 119946204
Centisome position: 68.83
GC content: 38.86
Gene sequence:
>1158_bases ATGAATAACAATAGTCTTGTAATTGCTGCTGCGGGATCTGGTAAAACAACGCTTTTAGTTAAAACCGCGATAGAAAATCC TAATAGGCCAATTTTGATTACAACTTACACTGAATCAAATGAGCAGGAAATAAGAGATAAGTTTGTTAAAAAAGTAAGAA CTGTACTAGCTAATGTCACGATTATCACATGGTTTTCATTCCTTCTTAAGCATTGGGTTAGGCCATATCAGTGCAGACTA AATGACTCTATTGCGGATGAAAGAATTGGGTTTATTCTGGTCAACTGGCGCTCTGGCCTTAAGTATAAAAATAAGGATGG TCAAGGAGTATACTGGTCAGAAAAAGATAACTTCAAGAATTATTACTTCACTAAAGACTTCAAGGTCTACTCCGATAAGA TATCCAAGTTTTGCTTTGAGGCAAATAAGGCAAGCAAGCAGGCAGTCGTTAACCGAATATCAGCGCTATATGGCATGATA TTTATAGATGAAGTGCAAGATCTTGCTGGGTTTGATTTAGAGTTGATCAAGCTTCTATTTAGGTCAAAATCAGAGGTCAT GTTAGTTGGAGATCCAAGACAAGTTACCTACAAGACTCACCATACAACTAAGTATTCTGACTATGGAAACGGAAATATCA AAGGATTTGTTACATCTGAAAAAACGTTGGGTAAACGGATATCTTGCGAAGTTGATGAAACAACACTTAATAAGTCACAT CGCTGTTCTCAGGATATTTGTGACTACTCTTCTAGACTCTACCCTAAATTTCCAGCTGTTGATGCATGTCAGTGTGATGA CTGCCGAAAAGAAAATATACTGCACCAAGGGGTTTTCATCGTCCCTAAGCGCCTTTGTTCGGAATACTTACAGACATATC AGCCAATGCAGCTTCGCTGGAATGCTAAATCTAAAGTAGATTCATCGTATGAAGTAATGAACTTTGGTGAGTCTAAAGGC CTTACTATAGATAGAGTACTTATTTACCCAACCAAGGATATGGTGAGTTGGATTCGTAATCCTAGCCAACCTGAATTACT AAAGAACCCTACTCGTGCGAGACTGTACGTGGCGCTGACTCGTGCGCGCCACAGTGTAGCTATAGTGTTAGACCCTGAGG AAAATGAAGTATTGGAAGGAGCTGTGGTATATAAATAG
Upstream 100 bases:
>100_bases AAACTACAAACACAAAAAACCAGTTGGTCTCTAAAGGTTTTTGAATCAAAATATAATTTTAGCTATCCAGAATACATCAC TAAAACAGTGGAGTGGTGTA
Downstream 100 bases:
>100_bases TGAGGAGGACATCCATGTATTTTGGATAACTAACACTAGTGCGAATTGCGTTAAGTTACTTCATTCGTTATCACGTTTAT GCCCATTCCCAAGTTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVTIITWFSFLLKHWVRPYQCRL NDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKNYYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMI FIDEVQDLAGFDLELIKLLFRSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRWNAKSKVDSSYEVMNFGESKG LTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALTRARHSVAIVLDPEENEVLEGAVVYK
Sequences:
>Translated_385_residues MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVTIITWFSFLLKHWVRPYQCRL NDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKNYYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMI FIDEVQDLAGFDLELIKLLFRSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRWNAKSKVDSSYEVMNFGESKG LTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALTRARHSVAIVLDPEENEVLEGAVVYK >Mature_385_residues MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVTIITWFSFLLKHWVRPYQCRL NDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKNYYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMI FIDEVQDLAGFDLELIKLLFRSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRWNAKSKVDSSYEVMNFGESKG LTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALTRARHSVAIVLDPEENEVLEGAVVYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44342; Mature: 44342
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVT CCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH IITWFSFLLKHWVRPYQCRLNDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKN HHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEECCCCCCEEEECCCCCCCC YYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMIFIDEVQDLAGFDLELIKLLF EEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH CCCCCEEEEECCCEEEEEECCCEECCCCCCCCEEEEEECCHHCCCEEEEEECHHHCCCCC RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRW CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHHHHHHCCCEEEEE NAKSKVDSSYEVMNFGESKGLTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALT CCCCCCCCCCCEEECCCCCCCEEEEEEEEECHHHHHHHCCCCCCHHHCCCCHHEEEEEEE RARHSVAIVLDPEENEVLEGAVVYK ECCCEEEEEECCCCCCEECCEEECC >Mature Secondary Structure MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVT CCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH IITWFSFLLKHWVRPYQCRLNDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKN HHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEECCCCCCEEEECCCCCCCC YYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMIFIDEVQDLAGFDLELIKLLF EEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH CCCCCEEEEECCCEEEEEECCCEECCCCCCCCEEEEEECCHHCCCEEEEEECHHHCCCCC RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRW CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHHHHHHCCCEEEEE NAKSKVDSSYEVMNFGESKGLTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALT CCCCCCCCCCCEEECCCCCCCEEEEEEEEECHHHHHHHCCCCCCHHHCCCCHHEEEEEEE RARHSVAIVLDPEENEVLEGAVVYK ECCCEEEEEECCCCCCEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA