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The map label for this gene is ocd2 [H]

Identifier: 119946180

GI number: 119946180

Start: 3105283

End: 3106227

Strand: Reverse

Name: ocd2 [H]

Synonym: Ping_2540

Alternate gene names: 119946180

Gene position: 3106227-3105283 (Counterclockwise)

Preceding gene: 119946181

Following gene: 119946179

Centisome position: 68.13

GC content: 46.35

Gene sequence:

>945_bases
ATGCATGTAATTGAAGCGTCTGAAGTTCATCAGGCAATGAATTTTGAAGAATTGATCCCGGCAATAGAAGAAACATTTGC
AGGCACTCACGGTATGCCGCAACGTAATGTATTTAGTTTGGAAGAAGACAGCGACCACAGTGATGGATTTGCCGTATTAC
CGGCTTGGAACAGCAAAGCGATTGGCGTTAAAGCCTTTACCCATTTTCCTGAAAATGGCCCGAAGGGCTTGGATCGCTTA
TATTCAAAGATTTTAATGTTTAAGCGTGAAACCGGGGAGCCCTTAGCCCTCGTTGACGGATCCAGTGTCACTTATTGGCG
AACAGCGGCAGTTTCAGCTCTGGGCAGTCAGTATCTGTCACGTAAAAATGCCAGTCGTTTATTAGTTTGTGGTGCAGGTA
ATCTAGCTGCGTACATGGCATTAGCGCACGCGACTGTGCGACCCATTACGCAGATAGATATTTGGGGGCGCAGCATCGAT
AAAGCTGAAAAAGTGGCCGAGCAAATACGCATGCAACGACCAGACATCAGCGTTGCAGCCATCACAGATCTTGAACATGC
GGCAGGTCAAGCTGATATTATCAGCTGTGCGACGGGTGCCGGTGAGCCATTAATTTTAGGTGAATGGGTAAAACCGGGCA
CACACACGGACTTTGTTGGCAATCATTCGCCAAACCGCCGCGAATGTGATACTGATTTAATCACCAAAGCCAGTGTTTTT
GTTGATAGCCGTGTTAACGTCCTAAGTGAAGCAGGAGAGTTATTAATACCTATTGAGGAAGGGGTGTTCAGTAAGGATGA
TGTCAAAGCTGAATTGGCCGAACTTGCCAGAGGTCAACATAAAGGACGCCAAACAGAAGAAGAAATCACTGTCTTTAAAA
CCGTCGGTACCGCGCTGTCAGATTTAGCGGCGGCTTGTTTAGTCGTAGAAAAATTGACTAACTAA

Upstream 100 bases:

>100_bases
TCGATACTCAGTTTTTATACCGCTTTATTCACTTCAGCATCGACAAGGTATACCCTATCAAATAGTTGTAAAATAATTAT
TTATCAAAGGAAGCCATAAA

Downstream 100 bases:

>100_bases
TATCTTAAGCTGAGTAACGATCCAATTATATGTACATAATATTTAAATGAAAAATTGGCTAAATTATTGAATTTAATTGC
CTGACTTGTGCAATATATTG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MHVIEASEVHQAMNFEELIPAIEETFAGTHGMPQRNVFSLEEDSDHSDGFAVLPAWNSKAIGVKAFTHFPENGPKGLDRL
YSKILMFKRETGEPLALVDGSSVTYWRTAAVSALGSQYLSRKNASRLLVCGAGNLAAYMALAHATVRPITQIDIWGRSID
KAEKVAEQIRMQRPDISVAAITDLEHAAGQADIISCATGAGEPLILGEWVKPGTHTDFVGNHSPNRRECDTDLITKASVF
VDSRVNVLSEAGELLIPIEEGVFSKDDVKAELAELARGQHKGRQTEEEITVFKTVGTALSDLAAACLVVEKLTN

Sequences:

>Translated_314_residues
MHVIEASEVHQAMNFEELIPAIEETFAGTHGMPQRNVFSLEEDSDHSDGFAVLPAWNSKAIGVKAFTHFPENGPKGLDRL
YSKILMFKRETGEPLALVDGSSVTYWRTAAVSALGSQYLSRKNASRLLVCGAGNLAAYMALAHATVRPITQIDIWGRSID
KAEKVAEQIRMQRPDISVAAITDLEHAAGQADIISCATGAGEPLILGEWVKPGTHTDFVGNHSPNRRECDTDLITKASVF
VDSRVNVLSEAGELLIPIEEGVFSKDDVKAELAELARGQHKGRQTEEEITVFKTVGTALSDLAAACLVVEKLTN
>Mature_314_residues
MHVIEASEVHQAMNFEELIPAIEETFAGTHGMPQRNVFSLEEDSDHSDGFAVLPAWNSKAIGVKAFTHFPENGPKGLDRL
YSKILMFKRETGEPLALVDGSSVTYWRTAAVSALGSQYLSRKNASRLLVCGAGNLAAYMALAHATVRPITQIDIWGRSID
KAEKVAEQIRMQRPDISVAAITDLEHAAGQADIISCATGAGEPLILGEWVKPGTHTDFVGNHSPNRRECDTDLITKASVF
VDSRVNVLSEAGELLIPIEEGVFSKDDVKAELAELARGQHKGRQTEEEITVFKTVGTALSDLAAACLVVEKLTN

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=319, Percent_Identity=30.0940438871473, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI62241008, Length=285, Percent_Identity=30.8771929824561, Blast_Score=131, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24642678, Length=260, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34050; Mature: 34050

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIEASEVHQAMNFEELIPAIEETFAGTHGMPQRNVFSLEEDSDHSDGFAVLPAWNSKA
CCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCC
IGVKAFTHFPENGPKGLDRLYSKILMFKRETGEPLALVDGSSVTYWRTAAVSALGSQYLS
EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
RKNASRLLVCGAGNLAAYMALAHATVRPITQIDIWGRSIDKAEKVAEQIRMQRPDISVAA
HCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEE
ITDLEHAAGQADIISCATGAGEPLILGEWVKPGTHTDFVGNHSPNRRECDTDLITKASVF
ECCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VDSRVNVLSEAGELLIPIEEGVFSKDDVKAELAELARGQHKGRQTEEEITVFKTVGTALS
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLAAACLVVEKLTN
HHHHHHHHHHHHCC
>Mature Secondary Structure
MHVIEASEVHQAMNFEELIPAIEETFAGTHGMPQRNVFSLEEDSDHSDGFAVLPAWNSKA
CCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCC
IGVKAFTHFPENGPKGLDRLYSKILMFKRETGEPLALVDGSSVTYWRTAAVSALGSQYLS
EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
RKNASRLLVCGAGNLAAYMALAHATVRPITQIDIWGRSIDKAEKVAEQIRMQRPDISVAA
HCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEE
ITDLEHAAGQADIISCATGAGEPLILGEWVKPGTHTDFVGNHSPNRRECDTDLITKASVF
ECCHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VDSRVNVLSEAGELLIPIEEGVFSKDDVKAELAELARGQHKGRQTEEEITVFKTVGTALS
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLAAACLVVEKLTN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]