| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946178
Identifier: 119946178
GI number: 119946178
Start: 3101771
End: 3102919
Strand: Reverse
Name: 119946178
Synonym: Ping_2538
Alternate gene names: NA
Gene position: 3102919-3101771 (Counterclockwise)
Preceding gene: 119946179
Following gene: 119946177
Centisome position: 68.05
GC content: 43.6
Gene sequence:
>1149_bases ATGACTAAGATTAAAACCATTACTGCACTCAGCAGCTTAAGCTCCCCACAACAGGCCAGTGAAGAGATACATCAGCAGCT TAATCATGGCGATCTTGGTTTTATTCTCTTTTACTGCTCCTCAGTCTATTCATTACCCGCGATAGCATTATCGATCCAGG CTTTATTTGCCAATATCAAAGTTGTCGGCTGCACCACGGCAGGCGAAATAAGCTCTGCAGGTGATCAGGAACATTCGATT GTCGCGATCGGATTCTCATCAAAGTATTTTGCTATCAGCGCAGAGTTAATTAAGTCAATGTCCGGATTTGATCTGCTTGA TGCACAAAAAACCATTAACAGACTCAGCGAAAAATGCACCTCAAAAGCATTAACTACCATTAAAAATAACACCTTTTTAC TGACCTTACTTGACGGACTGTCCTTTGAAGAAGAGCACTTTTTAGCGTCGTTAAATTCAGCCGCCGCGGGCATTCCCCAC TTTGGCGGCTCTGCAGGTGGTGATGATCATCTCAGCAATACCCATGTCTATTACGACGGTCAGTTTTATCAGCAAGCGGC TGTTGTTATTATGGTCAATACTATCTGCCCCTTTGAAGTCTTCAACTGTCATCATATAAAGCGGGCCACAGAAAAGTTGG TGGTGACTAAAGTTGATGCGCCAAGACGCACCGTATACGAGCTCAATGCTGAGCCTGCAGCTCTCGAATATGCGCGCTTA TTAAACCTTGAGGTTAAAGATCTTTGTCCGACGGTTTTTTCGCTTAATCCGCTGGCAGTAAAAGTGGGCGGTCAGTATTA CATCCGCTCTATTCAGAAGGTCAATGAAGCCGATTTAAGTTTAACCTTTTACTGCGCTGTTGACGTCGGCATTGTACTGA CAGCGGTAGAGATGGACGATATTCTGGATTCCTTATCCGCTAAGCTTACAGATATTTCAGAGCGTTACGGCAAACCGGAG CTGGTACTTGCCTGCGACTGTGTTTTAAGGCGTCTGGAAATTGAGCATAAAAATTTAAACACGCAGGTACAGGCATTAAA CAGTCAATACAAAATAGCCGGTTTTAATACTTATGGTGAACATATTAACGGCATTCATCTTAATCAAACCTTTACCGGTG TTTATATCGCGGGAGGCTCGAATGAATGA
Upstream 100 bases:
>100_bases TCCTCCGTCTCGTTTCCCATAGACCATATTTGTTATAGTTTTACCTCAATATTTTACAATTAACGTTTTTGAAAGATCTT CTCAAAAACCGGGAAAAAAC
Downstream 100 bases:
>100_bases GATGCAGCTTAGCGATGAAAATAAACGCCTGAAATATGATAATGCCAAACTCCTGAAAATTAATGAGGCATTGATGCAGC GCGTGGAAGAGGGTGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTKIKTITALSSLSSPQQASEEIHQQLNHGDLGFILFYCSSVYSLPAIALSIQALFANIKVVGCTTAGEISSAGDQEHSI VAIGFSSKYFAISAELIKSMSGFDLLDAQKTINRLSEKCTSKALTTIKNNTFLLTLLDGLSFEEEHFLASLNSAAAGIPH FGGSAGGDDHLSNTHVYYDGQFYQQAAVVIMVNTICPFEVFNCHHIKRATEKLVVTKVDAPRRTVYELNAEPAALEYARL LNLEVKDLCPTVFSLNPLAVKVGGQYYIRSIQKVNEADLSLTFYCAVDVGIVLTAVEMDDILDSLSAKLTDISERYGKPE LVLACDCVLRRLEIEHKNLNTQVQALNSQYKIAGFNTYGEHINGIHLNQTFTGVYIAGGSNE
Sequences:
>Translated_382_residues MTKIKTITALSSLSSPQQASEEIHQQLNHGDLGFILFYCSSVYSLPAIALSIQALFANIKVVGCTTAGEISSAGDQEHSI VAIGFSSKYFAISAELIKSMSGFDLLDAQKTINRLSEKCTSKALTTIKNNTFLLTLLDGLSFEEEHFLASLNSAAAGIPH FGGSAGGDDHLSNTHVYYDGQFYQQAAVVIMVNTICPFEVFNCHHIKRATEKLVVTKVDAPRRTVYELNAEPAALEYARL LNLEVKDLCPTVFSLNPLAVKVGGQYYIRSIQKVNEADLSLTFYCAVDVGIVLTAVEMDDILDSLSAKLTDISERYGKPE LVLACDCVLRRLEIEHKNLNTQVQALNSQYKIAGFNTYGEHINGIHLNQTFTGVYIAGGSNE >Mature_381_residues TKIKTITALSSLSSPQQASEEIHQQLNHGDLGFILFYCSSVYSLPAIALSIQALFANIKVVGCTTAGEISSAGDQEHSIV AIGFSSKYFAISAELIKSMSGFDLLDAQKTINRLSEKCTSKALTTIKNNTFLLTLLDGLSFEEEHFLASLNSAAAGIPHF GGSAGGDDHLSNTHVYYDGQFYQQAAVVIMVNTICPFEVFNCHHIKRATEKLVVTKVDAPRRTVYELNAEPAALEYARLL NLEVKDLCPTVFSLNPLAVKVGGQYYIRSIQKVNEADLSLTFYCAVDVGIVLTAVEMDDILDSLSAKLTDISERYGKPEL VLACDCVLRRLEIEHKNLNTQVQALNSQYKIAGFNTYGEHINGIHLNQTFTGVYIAGGSNE
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41722; Mature: 41591
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIKTITALSSLSSPQQASEEIHQQLNHGDLGFILFYCSSVYSLPAIALSIQALFANIK CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE VVGCTTAGEISSAGDQEHSIVAIGFSSKYFAISAELIKSMSGFDLLDAQKTINRLSEKCT EEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHH SKALTTIKNNTFLLTLLDGLSFEEEHFLASLNSAAAGIPHFGGSAGGDDHLSNTHVYYDG HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC QFYQQAAVVIMVNTICPFEVFNCHHIKRATEKLVVTKVDAPRRTVYELNAEPAALEYARL HHHHCEEEEEEEECCCCHHHHCHHHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHHHHH LNLEVKDLCPTVFSLNPLAVKVGGQYYIRSIQKVNEADLSLTFYCAVDVGIVLTAVEMDD HCCCHHHHCCHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEHHHH ILDSLSAKLTDISERYGKPELVLACDCVLRRLEIEHKNLNTQVQALNSQYKIAGFNTYGE HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCC HINGIHLNQTFTGVYIAGGSNE CCCCEEECCEEEEEEEECCCCC >Mature Secondary Structure TKIKTITALSSLSSPQQASEEIHQQLNHGDLGFILFYCSSVYSLPAIALSIQALFANIK CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE VVGCTTAGEISSAGDQEHSIVAIGFSSKYFAISAELIKSMSGFDLLDAQKTINRLSEKCT EEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHH SKALTTIKNNTFLLTLLDGLSFEEEHFLASLNSAAAGIPHFGGSAGGDDHLSNTHVYYDG HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC QFYQQAAVVIMVNTICPFEVFNCHHIKRATEKLVVTKVDAPRRTVYELNAEPAALEYARL HHHHCEEEEEEEECCCCHHHHCHHHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHHHHH LNLEVKDLCPTVFSLNPLAVKVGGQYYIRSIQKVNEADLSLTFYCAVDVGIVLTAVEMDD HCCCHHHHCCHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEHHHH ILDSLSAKLTDISERYGKPELVLACDCVLRRLEIEHKNLNTQVQALNSQYKIAGFNTYGE HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCC HINGIHLNQTFTGVYIAGGSNE CCCCEEECCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA