| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ubiG [H]
Identifier: 119946174
GI number: 119946174
Start: 3096407
End: 3097171
Strand: Direct
Name: ubiG [H]
Synonym: Ping_2534
Alternate gene names: 119946174
Gene position: 3096407-3097171 (Clockwise)
Preceding gene: 119946173
Following gene: 119946175
Centisome position: 67.91
GC content: 49.41
Gene sequence:
>765_bases ATGAGTGCAGCACCATCCAGAAATACCATCGATAAATCGGAAGTGGCTAAATTTGAAGCAATGTCCGCCGAGTGGTGGGA TCCAACCGGAAAATTCAAACCCCTGCATATGCTCAATCCCACGCGGATCGAATATATTGTTGATCAGATAGCGACCAAGT TCAGTCGTGACCGCAATAGTCTGAAACCCTTCGAGGGTTTGCGATTCCTTGATATCGGCTGCGGTGGTGGTCTGTTAAGC GAGCCGATGGCACAGCTCGGTGCCGAGGTGGTTGGCGCCGATGCGGCCGCGCGGAATATCCCCGTTGCACAAATTCACGC TGAGAAATCGGGGCTAACAATTGATTATCGTCATACCATGGCCGAGGCTTTGGTGGATGAGGGTGAGCTGTTTGATGTGA TCCTCAATATGGAAGTAATCGAACATGTTGCTTCACCGCAGGTCTTTCTTAATGCCTGCGCGGAGCTGTTAAAGCCCGGC GGATTAATGCTCTGTTCGACTATCAATCGCAATCCTAAAAGTTATATAGTGGCTATTATCGGGGCTGAACGGGTAATGCG CTGGCTGCCGATCGGCACACATGATTGGGCTAAGTTTATTACTCCTGACGAACTTTCCGTCATTACCAAAAAAGCCGGTC TTACGCAGTTAAATAAAAGAGGCTTTTCTTTTAACCCGCTTTTATGGCGCTGGTCAATTTCGCAGCGGGATCTGTCGGTC AATTATGTCACGGCGAGCATTAAACCGTTGACTGCAACCCCCTAG
Upstream 100 bases:
>100_bases ACTATGTTGAGATATGAAGATGACTATGTTGAAGTGAAAATAACAATATTGAACCTTATCCCGAATTCAGATTAATTAAT AATCAAGGCAGGTTAATAAT
Downstream 100 bases:
>100_bases GCCATCAAAATGAGTGTCTTACAAATTCACTCAAAAAGTATTCTCAAATCACTGTCAATTCGTTACAGTGGCGTTTATTT CAATTCTATATGCTCAAAAG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSAAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNSLKPFEGLRFLDIGCGGGLLS EPMAQLGAEVVGADAAARNIPVAQIHAEKSGLTIDYRHTMAEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPG GLMLCSTINRNPKSYIVAIIGAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSV NYVTASIKPLTATP
Sequences:
>Translated_254_residues MSAAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNSLKPFEGLRFLDIGCGGGLLS EPMAQLGAEVVGADAAARNIPVAQIHAEKSGLTIDYRHTMAEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPG GLMLCSTINRNPKSYIVAIIGAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSV NYVTASIKPLTATP >Mature_253_residues SAAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNSLKPFEGLRFLDIGCGGGLLSE PMAQLGAEVVGADAAARNIPVAQIHAEKSGLTIDYRHTMAEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPGG LMLCSTINRNPKSYIVAIIGAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSVN YVTASIKPLTATP
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=249, Percent_Identity=37.7510040160643, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI1788564, Length=241, Percent_Identity=40.2489626556017, Blast_Score=196, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115533050, Length=251, Percent_Identity=36.2549800796813, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=228, Percent_Identity=31.140350877193, Blast_Score=105, Evalue=6e-24, Organism=Drosophila melanogaster, GI281365311, Length=240, Percent_Identity=32.0833333333333, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI24585589, Length=215, Percent_Identity=33.0232558139535, Blast_Score=120, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 28109; Mature: 27978
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNS CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCC LKPFEGLRFLDIGCGGGLLSEPMAQLGAEVVGADAAARNIPVAQIHAEKSGLTIDYRHTM CCCCCCCEEEEECCCCCHHHHHHHHHCHHHHCCCHHHCCCCEEEEEECCCCCEEEHHHHH AEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPGGLMLCSTINRNPKSYIVAII HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEE GAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSV CHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCCCEEE NYVTASIKPLTATP EEEEEEEECCCCCC >Mature Secondary Structure SAAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNS CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCC LKPFEGLRFLDIGCGGGLLSEPMAQLGAEVVGADAAARNIPVAQIHAEKSGLTIDYRHTM CCCCCCCEEEEECCCCCHHHHHHHHHCHHHHCCCHHHCCCCEEEEEECCCCCEEEHHHHH AEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPGGLMLCSTINRNPKSYIVAII HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEE GAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSV CHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCCCEEE NYVTASIKPLTATP EEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA