| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946104
Identifier: 119946104
GI number: 119946104
Start: 3000204
End: 3000803
Strand: Reverse
Name: 119946104
Synonym: Ping_2454
Alternate gene names: NA
Gene position: 3000803-3000204 (Counterclockwise)
Preceding gene: 119946107
Following gene: 119946101
Centisome position: 65.81
GC content: 43.83
Gene sequence:
>600_bases ATGAAAAAAATCATTTCTGCACTCGGTTTAATGTATTTATCAGCCTGTACAATGCAACCTGCCAGGCCAGTCCAACCTGA TGAACAGGGGCCGGTTAACAGTGAGGAGAGTCAATGTATTGGCAGCGTTGAATTAGATCCGCAGGTCGCTCAATTGTTTG CGGTGTCCGATGATCGTGAAATGCTGCAGCGTGCTTTAGGAAGTCCTGAACAGGGAAAATTATGTCAGGGTAAGGTATAT CAACTTAAACCGGGACAGACTCTGCCGCTGCATCGTTCCTGGAACAGTACTAATCCAAGTAGTCAAATGGGGAGCTGGTG GGCATTTAATAAACCAACTGGGAAGGTCAGTTTATACCGTAATGATTATGAAATCTGTTATCAATGGTCACCGTTAGATA AATTAACCCAGTGTCAATTAAAAGCAGGGGCAAAGGTGGTGATTGGTAATGGACAAAGTGCCCAATGTTCGGCGTATTTA TCTTATCCGGTCTCAGCAGTACAGCAGGTCTATATTGAGAATAGTAGTGAGTCAATGCAGGACTGTGAGCAGTTTGACGG TGTCTTCAAATGGCAGTCAGATATGATTGAATCAAACTGA
Upstream 100 bases:
>100_bases TAGTGATTGATGTTATTTTAAAAACAAAATACTAAGCTACACTGATCTATTTTAATCGCTATCAGTCATTTATTGGTTTT TTAAGTTTAAAGGAACGAGT
Downstream 100 bases:
>100_bases TAAAAGGGCCGTTATGGCCCTCAAATTAATTATCTCATCTTAATTAACGACTTTTATAGTTACGTTTTCGAGATTTTTTC TTTTCTATTTTATTTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKKIISALGLMYLSACTMQPARPVQPDEQGPVNSEESQCIGSVELDPQVAQLFAVSDDREMLQRALGSPEQGKLCQGKVY QLKPGQTLPLHRSWNSTNPSSQMGSWWAFNKPTGKVSLYRNDYEICYQWSPLDKLTQCQLKAGAKVVIGNGQSAQCSAYL SYPVSAVQQVYIENSSESMQDCEQFDGVFKWQSDMIESN
Sequences:
>Translated_199_residues MKKIISALGLMYLSACTMQPARPVQPDEQGPVNSEESQCIGSVELDPQVAQLFAVSDDREMLQRALGSPEQGKLCQGKVY QLKPGQTLPLHRSWNSTNPSSQMGSWWAFNKPTGKVSLYRNDYEICYQWSPLDKLTQCQLKAGAKVVIGNGQSAQCSAYL SYPVSAVQQVYIENSSESMQDCEQFDGVFKWQSDMIESN >Mature_199_residues MKKIISALGLMYLSACTMQPARPVQPDEQGPVNSEESQCIGSVELDPQVAQLFAVSDDREMLQRALGSPEQGKLCQGKVY QLKPGQTLPLHRSWNSTNPSSQMGSWWAFNKPTGKVSLYRNDYEICYQWSPLDKLTQCQLKAGAKVVIGNGQSAQCSAYL SYPVSAVQQVYIENSSESMQDCEQFDGVFKWQSDMIESN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22159; Mature: 22159
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIISALGLMYLSACTMQPARPVQPDEQGPVNSEESQCIGSVELDPQVAQLFAVSDDRE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHEECCCCHH MLQRALGSPEQGKLCQGKVYQLKPGQTLPLHRSWNSTNPSSQMGSWWAFNKPTGKVSLYR HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEE NDYEICYQWSPLDKLTQCQLKAGAKVVIGNGQSAQCSAYLSYPVSAVQQVYIENSSESMQ CCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCEEHEEECCCHHHHHHHHHCCCCHHHH DCEQFDGVFKWQSDMIESN HHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MKKIISALGLMYLSACTMQPARPVQPDEQGPVNSEESQCIGSVELDPQVAQLFAVSDDRE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHEECCCCHH MLQRALGSPEQGKLCQGKVYQLKPGQTLPLHRSWNSTNPSSQMGSWWAFNKPTGKVSLYR HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEE NDYEICYQWSPLDKLTQCQLKAGAKVVIGNGQSAQCSAYLSYPVSAVQQVYIENSSESMQ CCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCEEHEEECCCHHHHHHHHHCCCCHHHH DCEQFDGVFKWQSDMIESN HHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA