Click here to switch to the map view.

The map label for this gene is pecM [H]

Identifier: 119946084

GI number: 119946084

Start: 2981395

End: 2982279

Strand: Direct

Name: pecM [H]

Synonym: Ping_2433

Alternate gene names: 119946084

Gene position: 2981395-2982279 (Clockwise)

Preceding gene: 119946072

Following gene: 119946085

Centisome position: 65.39

GC content: 40.45

Gene sequence:

>885_bases
ATGAATATTATATTGGCGATGGTGGCGGCTTTTTGTTGGGGTACGACCTATGCCGTCACGCAATACAGCCTTCAGGGTTG
GCCACCACTGCTACTGGGTGCGCTGCGTGCTTTGCCTGCGGGTTTACTGTTATTAATGATTAAACCCAACTTACCCAAAC
CTAATAACTGGGCTGTTTTACTGCGTCTGGGTGCCATTAATATTGCGCTATTTTTTAGCTTATTATTTGTGATGTCACAA
ACTCTGCCTTCGGCCATCTCGAGTATGGGTATGATTTATGTACCTGTTTTTGCGATGCTATTCCATTGGCTTATTTATAA
AAAGTCCCCCACTAAAGTACAAACTCTCTCCGGAATATTATTGATAATCTTAGCCTGGCATTTATTTGATCCACAAAAAA
TACAATTGAGCAGTCTCGGTTTACTGGCATTGGCAGGCGCGATAACTTGTATTGTGCTGGGCAGCAATATCACTAAATCT
TTAAGTAAGCACATTCACTGGTGGACGATTTTATCCTGGCAATTAATTTTAGGGGGAAGTCTGTTAGCGATTGTAGCAAG
TCTGCAGGCCATTATTTCACCGACACAATATATTAATGTGTGGCAGAATTTTAACCTCTTAAACGGATTGGGATTACTGT
GGCTGATCCTGCTTAATACGGTTTTAGCTTATAGCTTATATGTCTGGTTATTAGGCCGCATGACAGTGGTTGAATTTACT
TTTGCCGGCATTAGCAACCCGGTAGCCGGGATTTTAATGGGCTTATTGTTGCTTGGAGAGTCTTTTAGTTTTTATCAATA
CTCACTGATGGTGGCAATGATTCTAACCTCCCTACTGTCTCCTTTATTTACTCACTATCTGAATAAAAAAAATCAAAAAA
AATAA

Upstream 100 bases:

>100_bases
TAATATACATGCTTCCAAAAGCGACCAACTTTGGTTTTTTGCACTAGTGCATTCTATTCTCAGTCAGGCTCTTAGCGTAA
AGATATATAGAGATAAAAAT

Downstream 100 bases:

>100_bases
AGACTGCAGGGCTGATTTTATAAAACTGCAAAATATATTTTGCCAAGGAAGAAGTATATTGAACAGTTAAGCCATTCTAA
CCTAAATTTGGGATAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNIILAMVAAFCWGTTYAVTQYSLQGWPPLLLGALRALPAGLLLLMIKPNLPKPNNWAVLLRLGAINIALFFSLLFVMSQ
TLPSAISSMGMIYVPVFAMLFHWLIYKKSPTKVQTLSGILLIILAWHLFDPQKIQLSSLGLLALAGAITCIVLGSNITKS
LSKHIHWWTILSWQLILGGSLLAIVASLQAIISPTQYINVWQNFNLLNGLGLLWLILLNTVLAYSLYVWLLGRMTVVEFT
FAGISNPVAGILMGLLLLGESFSFYQYSLMVAMILTSLLSPLFTHYLNKKNQKK

Sequences:

>Translated_294_residues
MNIILAMVAAFCWGTTYAVTQYSLQGWPPLLLGALRALPAGLLLLMIKPNLPKPNNWAVLLRLGAINIALFFSLLFVMSQ
TLPSAISSMGMIYVPVFAMLFHWLIYKKSPTKVQTLSGILLIILAWHLFDPQKIQLSSLGLLALAGAITCIVLGSNITKS
LSKHIHWWTILSWQLILGGSLLAIVASLQAIISPTQYINVWQNFNLLNGLGLLWLILLNTVLAYSLYVWLLGRMTVVEFT
FAGISNPVAGILMGLLLLGESFSFYQYSLMVAMILTSLLSPLFTHYLNKKNQKK
>Mature_294_residues
MNIILAMVAAFCWGTTYAVTQYSLQGWPPLLLGALRALPAGLLLLMIKPNLPKPNNWAVLLRLGAINIALFFSLLFVMSQ
TLPSAISSMGMIYVPVFAMLFHWLIYKKSPTKVQTLSGILLIILAWHLFDPQKIQLSSLGLLALAGAITCIVLGSNITKS
LSKHIHWWTILSWQLILGGSLLAIVASLQAIISPTQYINVWQNFNLLNGLGLLWLILLNTVLAYSLYVWLLGRMTVVEFT
FAGISNPVAGILMGLLLLGESFSFYQYSLMVAMILTSLLSPLFTHYLNKKNQKK

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32594; Mature: 32594

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIILAMVAAFCWGTTYAVTQYSLQGWPPLLLGALRALPAGLLLLMIKPNLPKPNNWAVL
CHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE
LRLGAINIALFFSLLFVMSQTLPSAISSMGMIYVPVFAMLFHWLIYKKSPTKVQTLSGIL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIILAWHLFDPQKIQLSSLGLLALAGAITCIVLGSNITKSLSKHIHWWTILSWQLILGGS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLAIVASLQAIISPTQYINVWQNFNLLNGLGLLWLILLNTVLAYSLYVWLLGRMTVVEFT
HHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGISNPVAGILMGLLLLGESFSFYQYSLMVAMILTSLLSPLFTHYLNKKNQKK
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNIILAMVAAFCWGTTYAVTQYSLQGWPPLLLGALRALPAGLLLLMIKPNLPKPNNWAVL
CHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE
LRLGAINIALFFSLLFVMSQTLPSAISSMGMIYVPVFAMLFHWLIYKKSPTKVQTLSGIL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIILAWHLFDPQKIQLSSLGLLALAGAITCIVLGSNITKSLSKHIHWWTILSWQLILGGS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLAIVASLQAIISPTQYINVWQNFNLLNGLGLLWLILLNTVLAYSLYVWLLGRMTVVEFT
HHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGISNPVAGILMGLLLLGESFSFYQYSLMVAMILTSLLSPLFTHYLNKKNQKK
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]