| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946073
Identifier: 119946073
GI number: 119946073
Start: 2969608
End: 2970459
Strand: Reverse
Name: 119946073
Synonym: Ping_2422
Alternate gene names: NA
Gene position: 2970459-2969608 (Counterclockwise)
Preceding gene: 119946074
Following gene: 119946067
Centisome position: 65.15
GC content: 41.67
Gene sequence:
>852_bases ATGACGGATCCTAAAAAATTATTCACCCCTTTATTTGGTCTGGGTATTGCCGGAAATTCGGCAGGTCATTTACAGCAAAC AGGCGAGATAAATGGGTTAAGTGCAATTGATGACGCAGCAAAACCGCAAGCCTTATTTCCCTTTTTTGTCGCCAATGCAA AATCCGCTTATCTCACTTGTATGCCGTATTCATCGACTCAACTGCACTTACCGAAGGCGCTGGACGCTAAGGTGCAAATG GAGGCGGAATTAGGGCTCAAACTCGCTGTCGTTTATAATGCAGAGGGTGACGTCACGCAGCTTACTGCTATTTCGATGAC AGTTATCAATGATGCCACTTATCGAAATGCCAGCGTAGGCAAATTAGCGGAGAAAAAAAACTGGGGCATCGCGACTAAAG GTATTGCTGAACATGACATTCCGATTGATAATTTTGTAGAGGGCGGTGAGCTTGATCATTTTAGACTGTGCGGATTTCAT CAATCTAATGGACAATGGCAATTATGTGGGCAAGATACAGCAATTACAGAATACACTTATTTTTATCAGGCATTGCTGCA GTGGTTATTAAAACAAATCCGGCAACAACAGGATAAAAACGCACTGCATAATATACAAGATCTACTCTCACAAGCTGATT ATCCAGAGCAAATTTTAATCTCGATCGGTGCAACCCGTTACAGTGATTATGGCGAGCAGCATTATCTATCATCTGGAGAT CAATTGGTTGTCGCATTGTATGACAGCAGGGCTTATCATTTTCAAACGCTAGTAAGCCTGCTTGAAAAAACTGGGTCTTT GAAGGGATTGTCCAACAATAAAATCATTTTTCTACAACAACAAGTTGTTTGA
Upstream 100 bases:
>100_bases AAATGGCTGGCGAATACACGAACTAATTCATTAATGCGCTTTTATTAATAAAATAATAAAGGCACTTGACGTTAAACTTA AAGACAATAAAAGTGACTTT
Downstream 100 bases:
>100_bases AATAATCGGGTTGTCACCGATACTAGCTCAATGTATTAGTGGTCTAAAATTAAACCTATTATCTTTTTAACCGCTTAGCC GTAAAACCCCGTCATGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTDPKKLFTPLFGLGIAGNSAGHLQQTGEINGLSAIDDAAKPQALFPFFVANAKSAYLTCMPYSSTQLHLPKALDAKVQM EAELGLKLAVVYNAEGDVTQLTAISMTVINDATYRNASVGKLAEKKNWGIATKGIAEHDIPIDNFVEGGELDHFRLCGFH QSNGQWQLCGQDTAITEYTYFYQALLQWLLKQIRQQQDKNALHNIQDLLSQADYPEQILISIGATRYSDYGEQHYLSSGD QLVVALYDSRAYHFQTLVSLLEKTGSLKGLSNNKIIFLQQQVV
Sequences:
>Translated_283_residues MTDPKKLFTPLFGLGIAGNSAGHLQQTGEINGLSAIDDAAKPQALFPFFVANAKSAYLTCMPYSSTQLHLPKALDAKVQM EAELGLKLAVVYNAEGDVTQLTAISMTVINDATYRNASVGKLAEKKNWGIATKGIAEHDIPIDNFVEGGELDHFRLCGFH QSNGQWQLCGQDTAITEYTYFYQALLQWLLKQIRQQQDKNALHNIQDLLSQADYPEQILISIGATRYSDYGEQHYLSSGD QLVVALYDSRAYHFQTLVSLLEKTGSLKGLSNNKIIFLQQQVV >Mature_282_residues TDPKKLFTPLFGLGIAGNSAGHLQQTGEINGLSAIDDAAKPQALFPFFVANAKSAYLTCMPYSSTQLHLPKALDAKVQME AELGLKLAVVYNAEGDVTQLTAISMTVINDATYRNASVGKLAEKKNWGIATKGIAEHDIPIDNFVEGGELDHFRLCGFHQ SNGQWQLCGQDTAITEYTYFYQALLQWLLKQIRQQQDKNALHNIQDLLSQADYPEQILISIGATRYSDYGEQHYLSSGDQ LVVALYDSRAYHFQTLVSLLEKTGSLKGLSNNKIIFLQQQVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31323; Mature: 31192
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPKKLFTPLFGLGIAGNSAGHLQQTGEINGLSAIDDAAKPQALFPFFVANAKSAYLTC CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCCCEEEEE MPYSSTQLHLPKALDAKVQMEAELGLKLAVVYNAEGDVTQLTAISMTVINDATYRNASVG ECCCCCEEECCHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHH KLAEKKNWGIATKGIAEHDIPIDNFVEGGELDHFRLCGFHQSNGQWQLCGQDTAITEYTY HHHHHCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHH FYQALLQWLLKQIRQQQDKNALHNIQDLLSQADYPEQILISIGATRYSDYGEQHYLSSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHCCCC QLVVALYDSRAYHFQTLVSLLEKTGSLKGLSNNKIIFLQQQVV EEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TDPKKLFTPLFGLGIAGNSAGHLQQTGEINGLSAIDDAAKPQALFPFFVANAKSAYLTC CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCCCEEEEE MPYSSTQLHLPKALDAKVQMEAELGLKLAVVYNAEGDVTQLTAISMTVINDATYRNASVG ECCCCCEEECCHHCCCEEEEEECCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHH KLAEKKNWGIATKGIAEHDIPIDNFVEGGELDHFRLCGFHQSNGQWQLCGQDTAITEYTY HHHHHCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHH FYQALLQWLLKQIRQQQDKNALHNIQDLLSQADYPEQILISIGATRYSDYGEQHYLSSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHCCCC QLVVALYDSRAYHFQTLVSLLEKTGSLKGLSNNKIIFLQQQVV EEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA