| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946061
Identifier: 119946061
GI number: 119946061
Start: 2952717
End: 2953112
Strand: Direct
Name: 119946061
Synonym: Ping_2410
Alternate gene names: NA
Gene position: 2952717-2953112 (Clockwise)
Preceding gene: 119946055
Following gene: 119946063
Centisome position: 64.76
GC content: 34.34
Gene sequence:
>396_bases ATGACAATGGCTGCCAGGAGAAGAGTTTTGATAATTAAAGAAACTGATATCGTTAATGTATTAACCACATTGGAGTGCCG CACTAACTTCAGTATTAAAAAAATAACAGAATATATGCTGCCTAAACTAAAAGAAGCATTTTATCTGCACATAGAAAACC AGTCACCACACATTATTATTCGCCCGGTTTTTGAAGTTTTTGCCTCAGAGTTAGCGGCTATTAAAGGCGTCACTAAAAGA GAAGCCTATTTTCATAGCGCAGAAATGACCCGATTTCCTAAAAGAGTCCACAAAGGTATCAATGAAATCCATTATGGAAT TTCTTTTAAGTTTGAAAATAGTAAAGCAGTAACACTTTTTATAAAAAAATTAATAACCATTATCGGCGGCGGTTAA
Upstream 100 bases:
>100_bases TATCAATCTTCAAGTAATTTGTGTCTATCGCCTCGGGGAACGAGTGCAACTATGCGGGCCTAAATAAATATACGCAGCAT ATTTTAATGACAATATTTGA
Downstream 100 bases:
>100_bases GCATCAACCATGACTGTCTTTAATTTTGAATTGAAAAGATAAAAAATCATGAACTATGACATAACTCGGTGAGATATTTT TTTTCTGGCAATGCGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTMAARRRVLIIKETDIVNVLTTLECRTNFSIKKITEYMLPKLKEAFYLHIENQSPHIIIRPVFEVFASELAAIKGVTKR EAYFHSAEMTRFPKRVHKGINEIHYGISFKFENSKAVTLFIKKLITIIGGG
Sequences:
>Translated_131_residues MTMAARRRVLIIKETDIVNVLTTLECRTNFSIKKITEYMLPKLKEAFYLHIENQSPHIIIRPVFEVFASELAAIKGVTKR EAYFHSAEMTRFPKRVHKGINEIHYGISFKFENSKAVTLFIKKLITIIGGG >Mature_130_residues TMAARRRVLIIKETDIVNVLTTLECRTNFSIKKITEYMLPKLKEAFYLHIENQSPHIIIRPVFEVFASELAAIKGVTKRE AYFHSAEMTRFPKRVHKGINEIHYGISFKFENSKAVTLFIKKLITIIGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15098; Mature: 14967
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMAARRRVLIIKETDIVNVLTTLECRTNFSIKKITEYMLPKLKEAFYLHIENQSPHIII CCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEE RPVFEVFASELAAIKGVTKREAYFHSAEMTRFPKRVHKGINEIHYGISFKFENSKAVTLF HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH IKKLITIIGGG HHHHHHHHCCC >Mature Secondary Structure TMAARRRVLIIKETDIVNVLTTLECRTNFSIKKITEYMLPKLKEAFYLHIENQSPHIII CCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEE RPVFEVFASELAAIKGVTKREAYFHSAEMTRFPKRVHKGINEIHYGISFKFENSKAVTLF HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH IKKLITIIGGG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA