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The map label for this gene is yncB [H]

Identifier: 119946054

GI number: 119946054

Start: 2944357

End: 2945355

Strand: Reverse

Name: yncB [H]

Synonym: Ping_2403

Alternate gene names: 119946054

Gene position: 2945355-2944357 (Counterclockwise)

Preceding gene: 119946056

Following gene: 119946053

Centisome position: 64.6

GC content: 42.74

Gene sequence:

>999_bases
ATGGCAACATTTACCGCAATTAATTTAATTAAACGTCCTACTGGCGGCCCTCTTGACTCATCATTATTTGAAGTTGTTAA
AAAAACGATTCCAACTGTTGAAGCAGGGCAGTTTCTGGTAAAACAACAGCATATGTCATTGGATCCGGCTATGTTCGGTT
GGATGAGCGCTGATATGAACAGTTATATCCCGCCCGTTGCATTGGGTGATGTGATGCGCAGTTCCGGCATCGGTGAAGTG
ACGATGAGTCACCATCCTGATTTTGAAGTGGGCGATCGTGTTACGGGTATGATGGGGTGGCAGGAGTATTTTTTAAGTGA
TGGCCAAGGGGTAAATAAAGTAACGGCGCCATTACCTAATGAAAATATTTTATCTGTATTTGCATTGCCCGGTTTAACCG
CAGTACAAGGTTTATTTAATGTAGGCAAGCCTAAAAAAGGTGAAACACTTATTGTTACAGGCGCAGCAGGTTCAGTTGGT
TCAATCGTTGGACAACTCGCAAAAGCTGAAGGTCTACGGGTGATTGGGGTTGTCGGAAACCAGGAAAAAGCAGACTGGAT
AGTCAATGAATTGGGTTTTGATGCCGCAATCAATTATAAAAGTGATGATTTAGACGCGCAACTGGCAAAAGCGGCACCCG
ATGGCATTGATCTTTTCTTTGAAAATACCGGTGGCCCAATCCAACATTTCATCTTTGATCGTATTAATGCACATGGCCGT
GTTGTTGTCTGTGGATTAATTTCAGCTTATGATGCCGACGTGCCGGATTTAGGTCCAAGTTGGTTAAATATTATTAAACG
TCGTATTACCATTCAAGGTTTTACCATGCCGGATCACTTTCATCAGGTACCGGAGTTGTTAGAAAAATTGACCCCCTATG
TAATGGCTGGACAAATCAAACATCGCTCACATGTATTACAGGGGTTAGAGTCTGCTATTGAAGGCCTGAACTTATTCTCC
ACCGGTGAAAATAAAGGCAAGCTGATCGTTCAACTTTAA

Upstream 100 bases:

>100_bases
GAGCTTTCGAGCTTTCCAGCTAGGGGGTATATCTCACGCTTTAAAGTTGCCATAATGGCACTGTCAGTTAGCAACTGGAT
CTCTTAAAAGGAATATAACT

Downstream 100 bases:

>100_bases
TGTAAAAACGATGCTTTAATTGTTTTTTTGTTCATTCTGACTATTAGCTTAAAGGTTGCCACGTTTTGCTTGGCAACCTT
TAATTTAATATAAAAAACAG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MATFTAINLIKRPTGGPLDSSLFEVVKKTIPTVEAGQFLVKQQHMSLDPAMFGWMSADMNSYIPPVALGDVMRSSGIGEV
TMSHHPDFEVGDRVTGMMGWQEYFLSDGQGVNKVTAPLPNENILSVFALPGLTAVQGLFNVGKPKKGETLIVTGAAGSVG
SIVGQLAKAEGLRVIGVVGNQEKADWIVNELGFDAAINYKSDDLDAQLAKAAPDGIDLFFENTGGPIQHFIFDRINAHGR
VVVCGLISAYDADVPDLGPSWLNIIKRRITIQGFTMPDHFHQVPELLEKLTPYVMAGQIKHRSHVLQGLESAIEGLNLFS
TGENKGKLIVQL

Sequences:

>Translated_332_residues
MATFTAINLIKRPTGGPLDSSLFEVVKKTIPTVEAGQFLVKQQHMSLDPAMFGWMSADMNSYIPPVALGDVMRSSGIGEV
TMSHHPDFEVGDRVTGMMGWQEYFLSDGQGVNKVTAPLPNENILSVFALPGLTAVQGLFNVGKPKKGETLIVTGAAGSVG
SIVGQLAKAEGLRVIGVVGNQEKADWIVNELGFDAAINYKSDDLDAQLAKAAPDGIDLFFENTGGPIQHFIFDRINAHGR
VVVCGLISAYDADVPDLGPSWLNIIKRRITIQGFTMPDHFHQVPELLEKLTPYVMAGQIKHRSHVLQGLESAIEGLNLFS
TGENKGKLIVQL
>Mature_331_residues
ATFTAINLIKRPTGGPLDSSLFEVVKKTIPTVEAGQFLVKQQHMSLDPAMFGWMSADMNSYIPPVALGDVMRSSGIGEVT
MSHHPDFEVGDRVTGMMGWQEYFLSDGQGVNKVTAPLPNENILSVFALPGLTAVQGLFNVGKPKKGETLIVTGAAGSVGS
IVGQLAKAEGLRVIGVVGNQEKADWIVNELGFDAAINYKSDDLDAQLAKAAPDGIDLFFENTGGPIQHFIFDRINAHGRV
VVCGLISAYDADVPDLGPSWLNIIKRRITIQGFTMPDHFHQVPELLEKLTPYVMAGQIKHRSHVLQGLESAIEGLNLFST
GENKGKLIVQL

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=337, Percent_Identity=34.1246290801187, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI226246680, Length=337, Percent_Identity=34.1246290801187, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI22748929, Length=337, Percent_Identity=34.1246290801187, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI226059159, Length=331, Percent_Identity=30.8157099697885, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI226059133, Length=331, Percent_Identity=30.8157099697885, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI226056130, Length=249, Percent_Identity=34.136546184739, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI28557745, Length=321, Percent_Identity=26.1682242990654, Blast_Score=102, Evalue=7e-22,
Organism=Escherichia coli, GI226510941, Length=331, Percent_Identity=38.368580060423, Blast_Score=230, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI133901712, Length=334, Percent_Identity=32.0359281437126, Blast_Score=154, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI133901710, Length=334, Percent_Identity=32.0359281437126, Blast_Score=154, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6323504, Length=336, Percent_Identity=26.1904761904762, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35821; Mature: 35689

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFTAINLIKRPTGGPLDSSLFEVVKKTIPTVEAGQFLVKQQHMSLDPAMFGWMSADMN
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHH
SYIPPVALGDVMRSSGIGEVTMSHHPDFEVGDRVTGMMGWQEYFLSDGQGVNKVTAPLPN
HCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC
ENILSVFALPGLTAVQGLFNVGKPKKGETLIVTGAAGSVGSIVGQLAKAEGLRVIGVVGN
CCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECC
QEKADWIVNELGFDAAINYKSDDLDAQLAKAAPDGIDLFFENTGGPIQHFIFDRINAHGR
CCHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC
VVVCGLISAYDADVPDLGPSWLNIIKRRITIQGFTMPDHFHQVPELLEKLTPYVMAGQIK
EEEEEEHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHHHHH
HRSHVLQGLESAIEGLNLFSTGENKGKLIVQL
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEEC
>Mature Secondary Structure 
ATFTAINLIKRPTGGPLDSSLFEVVKKTIPTVEAGQFLVKQQHMSLDPAMFGWMSADMN
CCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHH
SYIPPVALGDVMRSSGIGEVTMSHHPDFEVGDRVTGMMGWQEYFLSDGQGVNKVTAPLPN
HCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC
ENILSVFALPGLTAVQGLFNVGKPKKGETLIVTGAAGSVGSIVGQLAKAEGLRVIGVVGN
CCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECC
QEKADWIVNELGFDAAINYKSDDLDAQLAKAAPDGIDLFFENTGGPIQHFIFDRINAHGR
CCHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC
VVVCGLISAYDADVPDLGPSWLNIIKRRITIQGFTMPDHFHQVPELLEKLTPYVMAGQIK
EEEEEEHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHHHHH
HRSHVLQGLESAIEGLNLFSTGENKGKLIVQL
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]