| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946053
Identifier: 119946053
GI number: 119946053
Start: 2942952
End: 2943734
Strand: Reverse
Name: 119946053
Synonym: Ping_2402
Alternate gene names: NA
Gene position: 2943734-2942952 (Counterclockwise)
Preceding gene: 119946054
Following gene: 119946052
Centisome position: 64.56
GC content: 39.46
Gene sequence:
>783_bases ATGCTAGCTAATCCAAGTCAATTAAAAACTACTTATGATGCACAAGGTTACTTTGTGATAAGAGATTATTTTACTGCGTC TGAGATTTCATCTCTTAGAAAGGTAATATTAAAATTTCATACCTTATGGAAAGATGACAACGAAATTTTCTATCGGGAGG AAGCGTTTAATTCATCTTTAATCACCGGCAGTCAGTACTTAGGATATGACAACCGGGTAAAGCTTTTTAATTTTATCAGC TCAAAAAAAATAATGAATATTGTCGAGTCGGTTATGGCGGCTGATCCCGCTTTTATGAATACCCAATTATTCTTTGACCC GGTGAGTCCTGAGCAAAAAGATTTTTGGCATCGAGACTGCCAATATGATTATGATATCGAAGACCAAAAGAAAGTGATTT ATAATCCGCAGGTATTACATCTTCGTGTGCCTTTATTTGATGAACCCGGCATAGAACTGGTGCCTGGAACCCATAAACGC TGGGACAGCGATGAAGAATTTAATGTGCGCGAAGAAATCAAGGGGAGAGTGAGCAGTGACAACCTCTCAACCGGTCAGGA AATTGAATTAGCCGCGGGCGACTTGTTAGTTTTTTCGGCCGATATGATTCACCGTGGTCGATACGGCTTGGATAGATTAG CATTGGATATTCTAGTCTTTGATTCAGCAGGGGATTATGCTGATTATGTTGATGACGACTGTTTGCCCGATACTTCAATG CTGGATAAAATTGCCGATCCAAGGTTATTTCTGAATACTATTAACTTAAAGTCGAAGGGCTGA
Upstream 100 bases:
>100_bases AGTTATTATACGACGGGTAAAAAAGCGTGATTAAAGAAAGGGTGCTCTACACCCTTTCTATCTTATATGTTCAAATAATA AGTTGAGGTAATAGTCGTTA
Downstream 100 bases:
>100_bases TTTTACGCTAAAAATAAGTGTGGTTAAGTTGTTATTTGCCATATGATTGATGCTATGGAGTGAATTGTCCGAATAGAAAA ATGCTTAGGGTTAGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM LDKIADPRLFLNTINLKSKG
Sequences:
>Translated_260_residues MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM LDKIADPRLFLNTINLKSKG >Mature_260_residues MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM LDKIADPRLFLNTINLKSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29988; Mature: 29988
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSL CCCCCHHCCEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCE ITGSQYLGYDNRVKLFNFISSKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDC ECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCC QYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKRWDSDEEFNVREEIKGRVSSD CCCCCCCCCCEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCC NLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM CCCCCCEEEEECCCEEEEEHHHHHCCCCCHHHEEEEEEEECCCCCHHHHCCCCCCCCHHH LDKIADPRLFLNTINLKSKG HHHHCCCEEEEEEECCCCCC >Mature Secondary Structure MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSL CCCCCHHCCEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCE ITGSQYLGYDNRVKLFNFISSKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDC ECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCC QYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKRWDSDEEFNVREEIKGRVSSD CCCCCCCCCCEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCC NLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM CCCCCCEEEEECCCEEEEEHHHHHCCCCCHHHEEEEEEEECCCCCHHHHCCCCCCCCHHH LDKIADPRLFLNTINLKSKG HHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA