Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119946053

Identifier: 119946053

GI number: 119946053

Start: 2942952

End: 2943734

Strand: Reverse

Name: 119946053

Synonym: Ping_2402

Alternate gene names: NA

Gene position: 2943734-2942952 (Counterclockwise)

Preceding gene: 119946054

Following gene: 119946052

Centisome position: 64.56

GC content: 39.46

Gene sequence:

>783_bases
ATGCTAGCTAATCCAAGTCAATTAAAAACTACTTATGATGCACAAGGTTACTTTGTGATAAGAGATTATTTTACTGCGTC
TGAGATTTCATCTCTTAGAAAGGTAATATTAAAATTTCATACCTTATGGAAAGATGACAACGAAATTTTCTATCGGGAGG
AAGCGTTTAATTCATCTTTAATCACCGGCAGTCAGTACTTAGGATATGACAACCGGGTAAAGCTTTTTAATTTTATCAGC
TCAAAAAAAATAATGAATATTGTCGAGTCGGTTATGGCGGCTGATCCCGCTTTTATGAATACCCAATTATTCTTTGACCC
GGTGAGTCCTGAGCAAAAAGATTTTTGGCATCGAGACTGCCAATATGATTATGATATCGAAGACCAAAAGAAAGTGATTT
ATAATCCGCAGGTATTACATCTTCGTGTGCCTTTATTTGATGAACCCGGCATAGAACTGGTGCCTGGAACCCATAAACGC
TGGGACAGCGATGAAGAATTTAATGTGCGCGAAGAAATCAAGGGGAGAGTGAGCAGTGACAACCTCTCAACCGGTCAGGA
AATTGAATTAGCCGCGGGCGACTTGTTAGTTTTTTCGGCCGATATGATTCACCGTGGTCGATACGGCTTGGATAGATTAG
CATTGGATATTCTAGTCTTTGATTCAGCAGGGGATTATGCTGATTATGTTGATGACGACTGTTTGCCCGATACTTCAATG
CTGGATAAAATTGCCGATCCAAGGTTATTTCTGAATACTATTAACTTAAAGTCGAAGGGCTGA

Upstream 100 bases:

>100_bases
AGTTATTATACGACGGGTAAAAAAGCGTGATTAAAGAAAGGGTGCTCTACACCCTTTCTATCTTATATGTTCAAATAATA
AGTTGAGGTAATAGTCGTTA

Downstream 100 bases:

>100_bases
TTTTACGCTAAAAATAAGTGTGGTTAAGTTGTTATTTGCCATATGATTGATGCTATGGAGTGAATTGTCCGAATAGAAAA
ATGCTTAGGGTTAGTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS
SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR
WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM
LDKIADPRLFLNTINLKSKG

Sequences:

>Translated_260_residues
MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS
SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR
WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM
LDKIADPRLFLNTINLKSKG
>Mature_260_residues
MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSLITGSQYLGYDNRVKLFNFIS
SKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDCQYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKR
WDSDEEFNVREEIKGRVSSDNLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM
LDKIADPRLFLNTINLKSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29988; Mature: 29988

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSL
CCCCCHHCCEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCE
ITGSQYLGYDNRVKLFNFISSKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDC
ECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCC
QYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKRWDSDEEFNVREEIKGRVSSD
CCCCCCCCCCEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCC
NLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM
CCCCCCEEEEECCCEEEEEHHHHHCCCCCHHHEEEEEEEECCCCCHHHHCCCCCCCCHHH
LDKIADPRLFLNTINLKSKG
HHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLANPSQLKTTYDAQGYFVIRDYFTASEISSLRKVILKFHTLWKDDNEIFYREEAFNSSL
CCCCCHHCCEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCE
ITGSQYLGYDNRVKLFNFISSKKIMNIVESVMAADPAFMNTQLFFDPVSPEQKDFWHRDC
ECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCC
QYDYDIEDQKKVIYNPQVLHLRVPLFDEPGIELVPGTHKRWDSDEEFNVREEIKGRVSSD
CCCCCCCCCCEEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCC
NLSTGQEIELAAGDLLVFSADMIHRGRYGLDRLALDILVFDSAGDYADYVDDDCLPDTSM
CCCCCCEEEEECCCEEEEEHHHHHCCCCCHHHEEEEEEEECCCCCHHHHCCCCCCCCHHH
LDKIADPRLFLNTINLKSKG
HHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA