Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946050

Identifier: 119946050

GI number: 119946050

Start: 2937116

End: 2937874

Strand: Reverse

Name: 119946050

Synonym: Ping_2398

Alternate gene names: NA

Gene position: 2937874-2937116 (Counterclockwise)

Preceding gene: 119946051

Following gene: 119946046

Centisome position: 64.43

GC content: 44.4

Gene sequence:

>759_bases
ATGATTGTTTTAGATCCTTGGTTTTATGCCACGGCTATTCCTGCAGTATTAATCTATGGTATCAGTAAAGGAGGATTTGG
AGGGGCGTTGGGTATTATTGCAGTGCCTTTGATGTCAATGGTTATCGTGGCCTCTCAGGCAGCAGCTATATTATTGCCTA
TTCTATGTGTGATGGACTTTTTCGCCGTTAAACAACACTATCGGCATGCGGATTATGGGCTATTAAGAGGTATGCTGCCA
GGGTCTTTAATAGGGGTTGCGTTGGCCGGTCTCTTTTTGAGCGTAACACCAGAATCAGGACTGAAATTACTGATAGGTGG
TTTATCACTGTTTTTTTGTCTGCAGTACATTGCCCTCGGCGCAGATAAGCAGAAAAAAAGAGGAACCCTTAGTGCTTGGT
TTTGGAGTCTAATGAGTGGTTTTTCCAGCACTGCTATTCATGCAGGCGGCGGGCCAGCCAGTATCTATTTGTTACCATTG
AAACTGGATAAAATAGTGTTTGTCGCCACTATGGCGGTATTATTGGGGGTTCTTAATTTGTTTAAACTGATCCCGTATAG
CCTATTGGGTGGATTTAATCAGACCAACTTGATGACTTCGCTGGTGTTGATGCCGTTGGCACCCGTTGGTGTGAAAATAG
GAGTGTGGTTACTGCACAGGGTAAGCCAGCCATTGGTCTACCGCTTGTGTTACATATTTCTGTTTCTCTCGGGCTGTAAG
TTGTTTTGGGATGGGGGGCAAACACTACTTCAATCTTAG

Upstream 100 bases:

>100_bases
AAGATAAGCAATATTGTGATGTATTTTTTAGATGATGGGTTGCTGCTTATATCTTCAATGGACTGGCAATAAATATAACT
TTTAACAGGGTAATACAGTG

Downstream 100 bases:

>100_bases
TCTTGGCTTCACCAATTCTTTAGCCTTGTTCTCTATTATGTTAAAGCTTCTGCTTGGGACTATTCCGTATCGTTTTTATC
AACTTGACGTTTTCCTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIVLDPWFYATAIPAVLIYGISKGGFGGALGIIAVPLMSMVIVASQAAAILLPILCVMDFFAVKQHYRHADYGLLRGMLP
GSLIGVALAGLFLSVTPESGLKLLIGGLSLFFCLQYIALGADKQKKRGTLSAWFWSLMSGFSSTAIHAGGGPASIYLLPL
KLDKIVFVATMAVLLGVLNLFKLIPYSLLGGFNQTNLMTSLVLMPLAPVGVKIGVWLLHRVSQPLVYRLCYIFLFLSGCK
LFWDGGQTLLQS

Sequences:

>Translated_252_residues
MIVLDPWFYATAIPAVLIYGISKGGFGGALGIIAVPLMSMVIVASQAAAILLPILCVMDFFAVKQHYRHADYGLLRGMLP
GSLIGVALAGLFLSVTPESGLKLLIGGLSLFFCLQYIALGADKQKKRGTLSAWFWSLMSGFSSTAIHAGGGPASIYLLPL
KLDKIVFVATMAVLLGVLNLFKLIPYSLLGGFNQTNLMTSLVLMPLAPVGVKIGVWLLHRVSQPLVYRLCYIFLFLSGCK
LFWDGGQTLLQS
>Mature_252_residues
MIVLDPWFYATAIPAVLIYGISKGGFGGALGIIAVPLMSMVIVASQAAAILLPILCVMDFFAVKQHYRHADYGLLRGMLP
GSLIGVALAGLFLSVTPESGLKLLIGGLSLFFCLQYIALGADKQKKRGTLSAWFWSLMSGFSSTAIHAGGGPASIYLLPL
KLDKIVFVATMAVLLGVLNLFKLIPYSLLGGFNQTNLMTSLVLMPLAPVGVKIGVWLLHRVSQPLVYRLCYIFLFLSGCK
LFWDGGQTLLQS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27087; Mature: 27087

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEECCCHHHHCC
>Mature Secondary Structure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HEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA