Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 119946006

GI number: 119946006

Start: 2857470

End: 2858951

Strand: Reverse

Name: glgA [H]

Synonym: Ping_2348

Alternate gene names: 119946006

Gene position: 2858951-2857470 (Counterclockwise)

Preceding gene: 119946007

Following gene: 119946005

Centisome position: 62.7

GC content: 42.78

Gene sequence:

>1482_bases
ATGAATATAGTTTGGGCAACAAGTGAGGCCGCACCCTATGCGAAAACAGGCGGATTAGCTGATGTATCATATTCACTGCC
ATACGCTTTAGCTGAAAATGGCCACAATGTTTCAGTTTTTATGCCGTATTATCCGCAGGTTATGGCTGAAAAATGTGCTG
ATACAGAGTGTGTGTATGAACTGCTGGGTGTCCCTTTTGGTGAAGGAAATGAAGAATGGGCACGTATCAGACGGCACAAG
GTGAGTGAAAACCTTTCTTTTTACTTTATAGAGTTTGATAGGTTCTTTGATCGTCCTAAATTATATGATTGGGATGGCAA
TGAATACTCAGACAATGCAGAGCGCTTTATATTCCTGAGCAGGGCAATCATGCAGGCTGTACTGGCACTGGATATTAAGG
TTGATGTACTTCATTCTAATGACTGGCATACGTCGTTGTGCAACGTATATGTAAAAAGTGCCCTGTACAACGGATTTGAT
AATTTTAAGCAAACCAAATCAATCATCACTATTCATAATATTGGCTATCAAGGTGTGTTTAGCAAGTCGAATCTTTACTG
GACAGGCCTTGGGTGGGAGTACTTTAATGTCCACTGTTTTGAATTCTACGACAAGCTTAACTTCCTAAAAGCAGGCGTGT
TGACCGCTGATATGGCGACAACAGTCAGCCCTACCTATGCAGAAGAAATTTTATCACCTGAATATGGATTCGGTCTGGAA
AATCCCCTTCAACACCGAGCCGCTCAAGGAAAACTGCGCGGGATTTTAAATGGTATCGATGTTCTTGAGTGGGATCCTGC
CACAGATAATCTGCTCCCTCACCATTTTTCACATAACGATTTGAGCGGTAAAGCTTTATGTAAAGTGGCACTGCAGAAAG
AATTTGGCATGGAAGTGCGCGCGGATGTGCCTATTTATGGTGTGGTATCGAGGCTTGCAGAGCAGAAGGGGCTAGATGTC
TTTATTGCATGTTTAGATAAGATGCTTGAGGAAGATGATGCCCAATTTGTTATTGTTGGTTCCGGAGAGAAGTGGCAAGA
AGTTGCCTTAGCTGATTATGCTAAAGCCTATCCAGATCGATTTGGATGTCATATTGGCTACAGCAATAAGCTTGCTCATT
TGGTCGAGGCGGGAGCCGATTTCTTTGTTATGCCTTCAAGGTATGAGCCATGCGGGCTTAATCAGATGTACAGCATGAAA
TATGGCACCGTGCCTATTGTAAGGTCAACGGGGGGGCTTGAAGACACCGTAAGCAATTATTCCATTGATAATATCGATAG
CGCAACAGGGTTTAAATTCTACGATCTGTATCCCGATGCATTAAGGGAAACCATGAGATGGGCAGCTTCGATATACCGTA
ACGATTTCTTGGCATTTGAAACAGTGATGAAAAATGGTATGACGAGTGACTTTTCATGGCATCACACGGCGGTAGAATAC
GAAGATTTATATCAGCATGCGAACACTAAATTTGGATCATAG

Upstream 100 bases:

>100_bases
AAAAATCAGTCTTGAACTTATTTAAAGACAGGTCAAATGATTTTTCCCGCAGAAAAGCGGTTTAGTTGAACAGATAACTT
AATATTTGAGGTGACATAGA

Downstream 100 bases:

>100_bases
ATTTGGTATTAGGCAGCAGAAAAATGCGTTAAATCATTTCCGCTGCCTAAAATATCGTCGATACTTGTGTAAGGCTGTAA
GGCTGTAAGGCTGTAAGGCT

Product: glycogen/starch synthases, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNIVWATSEAAPYAKTGGLADVSYSLPYALAENGHNVSVFMPYYPQVMAEKCADTECVYELLGVPFGEGNEEWARIRRHK
VSENLSFYFIEFDRFFDRPKLYDWDGNEYSDNAERFIFLSRAIMQAVLALDIKVDVLHSNDWHTSLCNVYVKSALYNGFD
NFKQTKSIITIHNIGYQGVFSKSNLYWTGLGWEYFNVHCFEFYDKLNFLKAGVLTADMATTVSPTYAEEILSPEYGFGLE
NPLQHRAAQGKLRGILNGIDVLEWDPATDNLLPHHFSHNDLSGKALCKVALQKEFGMEVRADVPIYGVVSRLAEQKGLDV
FIACLDKMLEEDDAQFVIVGSGEKWQEVALADYAKAYPDRFGCHIGYSNKLAHLVEAGADFFVMPSRYEPCGLNQMYSMK
YGTVPIVRSTGGLEDTVSNYSIDNIDSATGFKFYDLYPDALRETMRWAASIYRNDFLAFETVMKNGMTSDFSWHHTAVEY
EDLYQHANTKFGS

Sequences:

>Translated_493_residues
MNIVWATSEAAPYAKTGGLADVSYSLPYALAENGHNVSVFMPYYPQVMAEKCADTECVYELLGVPFGEGNEEWARIRRHK
VSENLSFYFIEFDRFFDRPKLYDWDGNEYSDNAERFIFLSRAIMQAVLALDIKVDVLHSNDWHTSLCNVYVKSALYNGFD
NFKQTKSIITIHNIGYQGVFSKSNLYWTGLGWEYFNVHCFEFYDKLNFLKAGVLTADMATTVSPTYAEEILSPEYGFGLE
NPLQHRAAQGKLRGILNGIDVLEWDPATDNLLPHHFSHNDLSGKALCKVALQKEFGMEVRADVPIYGVVSRLAEQKGLDV
FIACLDKMLEEDDAQFVIVGSGEKWQEVALADYAKAYPDRFGCHIGYSNKLAHLVEAGADFFVMPSRYEPCGLNQMYSMK
YGTVPIVRSTGGLEDTVSNYSIDNIDSATGFKFYDLYPDALRETMRWAASIYRNDFLAFETVMKNGMTSDFSWHHTAVEY
EDLYQHANTKFGS
>Mature_493_residues
MNIVWATSEAAPYAKTGGLADVSYSLPYALAENGHNVSVFMPYYPQVMAEKCADTECVYELLGVPFGEGNEEWARIRRHK
VSENLSFYFIEFDRFFDRPKLYDWDGNEYSDNAERFIFLSRAIMQAVLALDIKVDVLHSNDWHTSLCNVYVKSALYNGFD
NFKQTKSIITIHNIGYQGVFSKSNLYWTGLGWEYFNVHCFEFYDKLNFLKAGVLTADMATTVSPTYAEEILSPEYGFGLE
NPLQHRAAQGKLRGILNGIDVLEWDPATDNLLPHHFSHNDLSGKALCKVALQKEFGMEVRADVPIYGVVSRLAEQKGLDV
FIACLDKMLEEDDAQFVIVGSGEKWQEVALADYAKAYPDRFGCHIGYSNKLAHLVEAGADFFVMPSRYEPCGLNQMYSMK
YGTVPIVRSTGGLEDTVSNYSIDNIDSATGFKFYDLYPDALRETMRWAASIYRNDFLAFETVMKNGMTSDFSWHHTAVEY
EDLYQHANTKFGS

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=495, Percent_Identity=36.3636363636364, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 55971; Mature: 55971

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVWATSEAAPYAKTGGLADVSYSLPYALAENGHNVSVFMPYYPQVMAEKCADTECVYE
CEEEEECCCCCCCHHCCCCCEEECCCCCHHHCCCCEEEEECCCCHHHHHHHCCCHHHHHH
LLGVPFGEGNEEWARIRRHKVSENLSFYFIEFDRFFDRPKLYDWDGNEYSDNAERFIFLS
HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCEECCCCCCCCCCHHHHHHHH
RAIMQAVLALDIKVDVLHSNDWHTSLCNVYVKSALYNGFDNFKQTKSIITIHNIGYQGVF
HHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE
SKSNLYWTGLGWEYFNVHCFEFYDKLNFLKAGVLTADMATTVSPTYAEEILSPEYGFGLE
CCCCEEEEECCCHHHEEHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHCCCCCCCCCC
NPLQHRAAQGKLRGILNGIDVLEWDPATDNLLPHHFSHNDLSGKALCKVALQKEFGMEVR
CHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
ADVPIYGVVSRLAEQKGLDVFIACLDKMLEEDDAQFVIVGSGEKWQEVALADYAKAYPDR
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHH
FGCHIGYSNKLAHLVEAGADFFVMPSRYEPCGLNQMYSMKYGTVPIVRSTGGLEDTVSNY
CCEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEECCCCCHHHHCCC
SIDNIDSATGFKFYDLYPDALRETMRWAASIYRNDFLAFETVMKNGMTSDFSWHHTAVEY
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECH
EDLYQHANTKFGS
HHHHHHCCCCCCC
>Mature Secondary Structure
MNIVWATSEAAPYAKTGGLADVSYSLPYALAENGHNVSVFMPYYPQVMAEKCADTECVYE
CEEEEECCCCCCCHHCCCCCEEECCCCCHHHCCCCEEEEECCCCHHHHHHHCCCHHHHHH
LLGVPFGEGNEEWARIRRHKVSENLSFYFIEFDRFFDRPKLYDWDGNEYSDNAERFIFLS
HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCEECCCCCCCCCCHHHHHHHH
RAIMQAVLALDIKVDVLHSNDWHTSLCNVYVKSALYNGFDNFKQTKSIITIHNIGYQGVF
HHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE
SKSNLYWTGLGWEYFNVHCFEFYDKLNFLKAGVLTADMATTVSPTYAEEILSPEYGFGLE
CCCCEEEEECCCHHHEEHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHCCCCCCCCCC
NPLQHRAAQGKLRGILNGIDVLEWDPATDNLLPHHFSHNDLSGKALCKVALQKEFGMEVR
CHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
ADVPIYGVVSRLAEQKGLDVFIACLDKMLEEDDAQFVIVGSGEKWQEVALADYAKAYPDR
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHH
FGCHIGYSNKLAHLVEAGADFFVMPSRYEPCGLNQMYSMKYGTVPIVRSTGGLEDTVSNY
CCEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEECCCCCHHHHCCC
SIDNIDSATGFKFYDLYPDALRETMRWAASIYRNDFLAFETVMKNGMTSDFSWHHTAVEY
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECH
EDLYQHANTKFGS
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA