| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yfiQ [H]
Identifier: 119946003
GI number: 119946003
Start: 2851929
End: 2854622
Strand: Reverse
Name: yfiQ [H]
Synonym: Ping_2345
Alternate gene names: 119946003
Gene position: 2854622-2851929 (Counterclockwise)
Preceding gene: 119946005
Following gene: 119946002
Centisome position: 62.61
GC content: 41.76
Gene sequence:
>2694_bases ATGAGTTTATTAACACTAAAAGGTTTCTTTAATCCAAAATCGATAGCTGTTATAGGTGCTTCCGTTGTCTCTTATCGGGC CGGTTATTTAGTTATGAATAATCTATTATCAGGGGGCTTTAATGGCCCTATCATGCCCGTTACGCCTAAATATTCTTCAG TGCATGGTGTGCTTGCTTATAAAGACATCAGCCAGTTACCTATTACACCTGAACTGGCAGTTATTTGTACCAATGAATCT CGTATTACTGATATTTTACAAGCTTTAGCAGAAAAGGGCTGCAGCAGGGCGATTGTGGTCACCACTGAAAAAGATCAACA AATTGCAGATGCCGTTTATAAAACGGCAAAAGAACTCGGCATAAGGCTTTTAGGCATGAGCAGCATAGGTATTATAAATC CTTATACGAAATTAAATGCCAGTCTTGCCCATTGTAATGCGTTGCCGGGAAATATTGCTTTTATTTCACAATCCGCTGCG GTTTGTACCTCAATATTAGATTGGGCAAACAGTAAGGGTATTGGTTTTTCTGCCTTTATTTCTATTGGGGATGGTCAGGA TATTAGTTTTGCGGAATTATTAGATTATCTGGCACGCGATGCTAAAACCCAATCAATACTTTTATATATCGATAGCATCT CCGATGCACGTGCCTTTTTATCCGCCGCGCGGGCCATCTCTCAGCATAAGTCTGTTGTGGTGATTAAAGCTGGCCGTTCA TTTTTAGGGGCGAAGGCCGCAGCGCTGCACAGCAATGGCCAATATGGACATGACCGTGTTTATGATGCGGCCTTTAAACG CGTTGGTATGTTGCGTGTTTATGATTTCCATGAGCTGTTTGCAGCGGTTGAGACGCTGGCCTACTCAAACTATCTGCACG GTGAGCGTTTAGCTATTATTACCAACGGAGGAGGGTTAGGTGTTTTAGCCGTCGATGATTTAGTTGAACAGGGTGGGCGG CTGGCCGAGCTTGATGATGATTTGATGACACGATTAAATAACTGCTTACCCAGTAACTGGTCACATAATAACCCCGTCGA TATGATTGGCGATGCCGATCCAAAACGTTATGCGACGGCATTAAATATTTTAATGAACAGTGATCAAGTTGATGCGATAT TAATTATGCATTCCCCCTCTGCATTATCTGACAGTGAAGCCTGCGCGCGAGCCATCATTGATGTTATTGAAAAACATCCC AACAAAAAACGGGTGAACCTCCTGACCAACTGGACAGGAGAGGATGCTGCAAAATCTGCTCGACTATTATTTTCCCAAGC AAACATTGGCACTCTAAGAACCCCAAAGGGGGCCATTACTGCCTTTATGCATTTAGTACAATATCGGCGTAATAAAAAGT TATTAATGGAAACACCCAGCAGTACCCCGGAAAATTTATTTTATGATATGTACGCTGCATCGATATATATTAAACGTCTT GTTGACCTGGATTCAGGATTAATAAAGCTCAATACTTTCCAGACAAAACCTATATTAGAAGCTTATCAGCTGGATACTAT CGAAACCCTGGTGGTAGAGTCAGCAGAGGAGGCGTTAGAAAAAGCAAAATATATTGGTTTCCCCTTGGCAGTGAAAATTA ACTCACCCGATATTGCCTACAAATCCCTCGTCCATGGTGTGATTTTAAACATTAATAATTTACGTGAATTAGATGTGGCC TTAAAAGCGATTCACAAACGGGTTAAAACCTTATTGCCAGAGGCTCGTTTAACCGGATTTACGCTGCAAAAAATGGTCGC TAGTGGCCTGGGGTTAGAGTTGCGGGTCATGATTAAACAGGATCCCATTTTTGGTCCTGTTATTGCTATTTCACAGGAAA GTGATGCGCGGGATCTGCAAACCGCTCTGGAGAACTCGGTGGTTGCTTTGCCGCCGTTAAACATGGCATTAGCACGTTAT CTGATGATTCAGGGCATTAAAGAGAAAAAGATTCAGGTCAAAAAAGCGGCGCAGGATTTTGATATGGATGCCGTGTGCTT AATGCTGACTAAAATCTCACAAATGTTAATAGATAATAGAGAAATCAACGAATTAGATCTCAATCCTGTGTTAGTAACAG GTAAAAAAGTGATTGTTTTAGACAGTCAAATGCATCTTCTGCATTCAGAAATTAGTGCACAGAGCAAGTTTGCGATCACG CCTTATCCAAAACAGTTAGAGGAGCCGGTGCGGCTTAAAAATGGTGAACAGATATTAATTCGTCCCATTAAAGCGGAAGA TGAGGCGCGCCATCAAATTTTTGATGCGGCATTAAGTGAAGAGGATCGTTATAAACGTTACTTTTCACAGCGCGGGAAAA TGAGTCATGAAGAGATGGCGACATTAACCCAGATTGATTACGAGCGAGAAATGGCCTTTATTGCTGTGCGTTTTGATGAA CTTAATGAGCAGGAAACCTTGGCCGTGGTTAACGCATCGGTTGACTCCGATAATATTGATGCTGAATTTGCGATGGTAGT GCGTTCCGATCTGCAGGGCTTAGGATTAGGTAAAATATTGTTACAAAAAATCATTCAATACCAACAAGCTAAAGGCACCA CTTATTTAACCGGGATGACGATGCTCTCTAATGTCGGCATGGCAAGTTTGTCTAAAAAATTAGGGTTTGAACTTGAAAGA GATATGCAGGAAGGGGTGATCTATATGAAATTAGCCTTGCAAAAGCCAAGTTGA
Upstream 100 bases:
>100_bases AAATTATAGGATAAGTATCTTATTTTAAAAAGAAACAAAAGCATAAAAATGATGGTAGCGTAAACTATTAATATTTATAT TTTTCTAAGGCGTCTTGTTC
Downstream 100 bases:
>100_bases ATGATTTTTTTTGTAAGTTTACAGATAAGCGCTTAGCATTCCTTAAGCCATCTTGTATATTGGTACTCACTATTATGAAT CTGCTACAAAAAAGGGTGCC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MSLLTLKGFFNPKSIAVIGASVVSYRAGYLVMNNLLSGGFNGPIMPVTPKYSSVHGVLAYKDISQLPITPELAVICTNES RITDILQALAEKGCSRAIVVTTEKDQQIADAVYKTAKELGIRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAA VCTSILDWANSKGIGFSAFISIGDGQDISFAELLDYLARDAKTQSILLYIDSISDARAFLSAARAISQHKSVVVIKAGRS FLGAKAAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGERLAIITNGGGLGVLAVDDLVEQGGR LAELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATALNILMNSDQVDAILIMHSPSALSDSEACARAIIDVIEKHP NKKRVNLLTNWTGEDAAKSARLLFSQANIGTLRTPKGAITAFMHLVQYRRNKKLLMETPSSTPENLFYDMYAASIYIKRL VDLDSGLIKLNTFQTKPILEAYQLDTIETLVVESAEEALEKAKYIGFPLAVKINSPDIAYKSLVHGVILNINNLRELDVA LKAIHKRVKTLLPEARLTGFTLQKMVASGLGLELRVMIKQDPIFGPVIAISQESDARDLQTALENSVVALPPLNMALARY LMIQGIKEKKIQVKKAAQDFDMDAVCLMLTKISQMLIDNREINELDLNPVLVTGKKVIVLDSQMHLLHSEISAQSKFAIT PYPKQLEEPVRLKNGEQILIRPIKAEDEARHQIFDAALSEEDRYKRYFSQRGKMSHEEMATLTQIDYEREMAFIAVRFDE LNEQETLAVVNASVDSDNIDAEFAMVVRSDLQGLGLGKILLQKIIQYQQAKGTTYLTGMTMLSNVGMASLSKKLGFELER DMQEGVIYMKLALQKPS
Sequences:
>Translated_897_residues MSLLTLKGFFNPKSIAVIGASVVSYRAGYLVMNNLLSGGFNGPIMPVTPKYSSVHGVLAYKDISQLPITPELAVICTNES RITDILQALAEKGCSRAIVVTTEKDQQIADAVYKTAKELGIRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAA VCTSILDWANSKGIGFSAFISIGDGQDISFAELLDYLARDAKTQSILLYIDSISDARAFLSAARAISQHKSVVVIKAGRS FLGAKAAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGERLAIITNGGGLGVLAVDDLVEQGGR LAELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATALNILMNSDQVDAILIMHSPSALSDSEACARAIIDVIEKHP NKKRVNLLTNWTGEDAAKSARLLFSQANIGTLRTPKGAITAFMHLVQYRRNKKLLMETPSSTPENLFYDMYAASIYIKRL VDLDSGLIKLNTFQTKPILEAYQLDTIETLVVESAEEALEKAKYIGFPLAVKINSPDIAYKSLVHGVILNINNLRELDVA LKAIHKRVKTLLPEARLTGFTLQKMVASGLGLELRVMIKQDPIFGPVIAISQESDARDLQTALENSVVALPPLNMALARY LMIQGIKEKKIQVKKAAQDFDMDAVCLMLTKISQMLIDNREINELDLNPVLVTGKKVIVLDSQMHLLHSEISAQSKFAIT PYPKQLEEPVRLKNGEQILIRPIKAEDEARHQIFDAALSEEDRYKRYFSQRGKMSHEEMATLTQIDYEREMAFIAVRFDE LNEQETLAVVNASVDSDNIDAEFAMVVRSDLQGLGLGKILLQKIIQYQQAKGTTYLTGMTMLSNVGMASLSKKLGFELER DMQEGVIYMKLALQKPS >Mature_896_residues SLLTLKGFFNPKSIAVIGASVVSYRAGYLVMNNLLSGGFNGPIMPVTPKYSSVHGVLAYKDISQLPITPELAVICTNESR ITDILQALAEKGCSRAIVVTTEKDQQIADAVYKTAKELGIRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAAV CTSILDWANSKGIGFSAFISIGDGQDISFAELLDYLARDAKTQSILLYIDSISDARAFLSAARAISQHKSVVVIKAGRSF LGAKAAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGERLAIITNGGGLGVLAVDDLVEQGGRL AELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATALNILMNSDQVDAILIMHSPSALSDSEACARAIIDVIEKHPN KKRVNLLTNWTGEDAAKSARLLFSQANIGTLRTPKGAITAFMHLVQYRRNKKLLMETPSSTPENLFYDMYAASIYIKRLV DLDSGLIKLNTFQTKPILEAYQLDTIETLVVESAEEALEKAKYIGFPLAVKINSPDIAYKSLVHGVILNINNLRELDVAL KAIHKRVKTLLPEARLTGFTLQKMVASGLGLELRVMIKQDPIFGPVIAISQESDARDLQTALENSVVALPPLNMALARYL MIQGIKEKKIQVKKAAQDFDMDAVCLMLTKISQMLIDNREINELDLNPVLVTGKKVIVLDSQMHLLHSEISAQSKFAITP YPKQLEEPVRLKNGEQILIRPIKAEDEARHQIFDAALSEEDRYKRYFSQRGKMSHEEMATLTQIDYEREMAFIAVRFDEL NEQETLAVVNASVDSDNIDAEFAMVVRSDLQGLGLGKILLQKIIQYQQAKGTTYLTGMTMLSNVGMASLSKKLGFELERD MQEGVIYMKLALQKPS
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=898, Percent_Identity=45.8797327394209, Blast_Score=791, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 98886; Mature: 98755
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLTLKGFFNPKSIAVIGASVVSYRAGYLVMNNLLSGGFNGPIMPVTPKYSSVHGVLAY CCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE KDISQLPITPELAVICTNESRITDILQALAEKGCSRAIVVTTEKDQQIADAVYKTAKELG CCHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHC IRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAAVCTSILDWANSKGIGFSAFI EEEEEECCCCCCCCHHHHCCHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEE SIGDGQDISFAELLDYLARDAKTQSILLYIDSISDARAFLSAARAISQHKSVVVIKAGRS EECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCC FLGAKAAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGERLAII HHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEE TNGGGLGVLAVDDLVEQGGRLAELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATA ECCCCEEEEEHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LNILMNSDQVDAILIMHSPSALSDSEACARAIIDVIEKHPNKKRVNLLTNWTGEDAAKSA HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH RLLFSQANIGTLRTPKGAITAFMHLVQYRRNKKLLMETPSSTPENLFYDMYAASIYIKRL HHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH VDLDSGLIKLNTFQTKPILEAYQLDTIETLVVESAEEALEKAKYIGFPLAVKINSPDIAY HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH KSLVHGVILNINNLRELDVALKAIHKRVKTLLPEARLTGFTLQKMVASGLGLELRVMIKQ HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCEEEEEEEEC DPIFGPVIAISQESDARDLQTALENSVVALPPLNMALARYLMIQGIKEKKIQVKKAAQDF CCCCCCEEEEECCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCC DMDAVCLMLTKISQMLIDNREINELDLNPVLVTGKKVIVLDSQMHLLHSEISAQSKFAIT CCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCEEEEECCHHHHHHHHHCCCCCEEEC PYPKQLEEPVRLKNGEQILIRPIKAEDEARHQIFDAALSEEDRYKRYFSQRGKMSHEEMA CCCHHHCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH TLTQIDYEREMAFIAVRFDELNEQETLAVVNASVDSDNIDAEFAMVVRSDLQGLGLGKIL HHHHHHHHHCEEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH LQKIIQYQQAKGTTYLTGMTMLSNVGMASLSKKLGFELERDMQEGVIYMKLALQKPS HHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHCCEEEEEEEECCCC >Mature Secondary Structure SLLTLKGFFNPKSIAVIGASVVSYRAGYLVMNNLLSGGFNGPIMPVTPKYSSVHGVLAY CEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE KDISQLPITPELAVICTNESRITDILQALAEKGCSRAIVVTTEKDQQIADAVYKTAKELG CCHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHC IRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAAVCTSILDWANSKGIGFSAFI EEEEEECCCCCCCCHHHHCCHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEE SIGDGQDISFAELLDYLARDAKTQSILLYIDSISDARAFLSAARAISQHKSVVVIKAGRS EECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCC FLGAKAAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGERLAII HHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEE TNGGGLGVLAVDDLVEQGGRLAELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATA ECCCCEEEEEHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LNILMNSDQVDAILIMHSPSALSDSEACARAIIDVIEKHPNKKRVNLLTNWTGEDAAKSA HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH RLLFSQANIGTLRTPKGAITAFMHLVQYRRNKKLLMETPSSTPENLFYDMYAASIYIKRL HHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH VDLDSGLIKLNTFQTKPILEAYQLDTIETLVVESAEEALEKAKYIGFPLAVKINSPDIAY HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH KSLVHGVILNINNLRELDVALKAIHKRVKTLLPEARLTGFTLQKMVASGLGLELRVMIKQ HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCEEEEEEEEC DPIFGPVIAISQESDARDLQTALENSVVALPPLNMALARYLMIQGIKEKKIQVKKAAQDF CCCCCCEEEEECCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCC DMDAVCLMLTKISQMLIDNREINELDLNPVLVTGKKVIVLDSQMHLLHSEISAQSKFAIT CCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCEEEEECCHHHHHHHHHCCCCCEEEC PYPKQLEEPVRLKNGEQILIRPIKAEDEARHQIFDAALSEEDRYKRYFSQRGKMSHEEMA CCCHHHCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH TLTQIDYEREMAFIAVRFDELNEQETLAVVNASVDSDNIDAEFAMVVRSDLQGLGLGKIL HHHHHHHHHCEEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH LQKIIQYQQAKGTTYLTGMTMLSNVGMASLSKKLGFELERDMQEGVIYMKLALQKPS HHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]