Click here to switch to the map view.

The map label for this gene is 119945950

Identifier: 119945950

GI number: 119945950

Start: 2783399

End: 2784529

Strand: Direct

Name: 119945950

Synonym: Ping_2290

Alternate gene names: NA

Gene position: 2783399-2784529 (Clockwise)

Preceding gene: 119945949

Following gene: 119945952

Centisome position: 61.04

GC content: 41.47

Gene sequence:

>1131_bases
ATGCGCTTTAATGAAAACCAATTAACCACCCCTTATTTTATGGTCGATGAAAAAAAGCTGATTGAAAATCTTGAAAAAGC
CAAACAGCTGAAAAAAATTTCAGGGGCTAAATTAGTATTAGCATTAAAGTGTTTTTCAACCTGGGGAACGTTCGACACAA
TTAAACCCTATTTAGACGGCACCACCAGCTCCGGCCCTTTTGAAGTTCAACTAGGCCATGAGACCTTTGGCGGTGAAACC
CATGCCTACAGCGTGGGTTATTCTAGCCACGATATCAATACCGTTGCGCCTTTATCGGACAAAATCATCTTTAACTCATT
AACTCAGTTGGCCACACATTTTGAGGCAGCCAATCCCTTTGCATCCTTAGGCTTGCGCATTAATCCTGAGCGCAGCGTTG
CCGGTCAAGATCTTGCCAATCCAACCCGCCCTTACTCACGTTTAGGCGTAAAACAGGATTTACTGGATTTATCCATTGTT
GATAAAGTGGATGGTTTTATGTTTCATATGAACTGTGAAAACAAAGATGCCGATGCCTTTATAGAAATTTTAGATTATAT
TTCGAACACCTTTGCAGAATATTTAACCCACCTTAAATGGTTAAGTTTAGGCGGTGGGATTTTCTTTACTGCGCCGGATT
ACCCGATTGAAAAACTGGCCCTGGCATTAAAAGCCTTTAGTGAAAAACACCAGCTTCAACTCTACTTAGAGCCCGGTGAA
GCAATTATCACCCGCACCGCGGATCTGGTGGTCAGCGTCATTGATATTGTTGATAATAATAAAAAAACAGCCATTGTAGA
CAGTGCCACAGAAGCCCATCGTTTAGATACGCTAATCTACAATGAACCAGCCTCGATTGGCGAGGCCTCCGCTGATGGAG
CATTCCCCTATATTATAGGATCATGCTCCTGTTTAGCAGGCGATCAATTCTGTGAAACACAATTTGATGAAGCGCTGCAA
ATTGGGCAAAAATTACATATTCTCGATTCTGCCGGTTATACCATGGTCAAACTAAATTGGTTTAACGGTTTGAAAATGCC
CAGTATCTACTACAAGCGTGTCGATGGGGAAATTGAGTTATTAAACTCTTTTGACTATCAAGATTATAAAGACAGTTTAG
GCAAAGGCTAA

Upstream 100 bases:

>100_bases
GCAGGTACAAGAGCTAGACGCTTAATCTCCGCTTACTTTAAACGAAGGTTCCGGCCTTCGTTTTTATTCCTACTTTCTAA
CCTAAAAAAAGACTCCCATT

Downstream 100 bases:

>100_bases
ACAAAGGATTAAACTAGCATAACGTTTGGATGAGTAATACTTGCCGAGTGTTCTGACAAATAACACCCGGCGCGCGTTAA
CTCTGCGACCCCCAGTATAA

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRFNENQLTTPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEVQLGHETFGGET
HAYSVGYSSHDINTVAPLSDKIIFNSLTQLATHFEAANPFASLGLRINPERSVAGQDLANPTRPYSRLGVKQDLLDLSIV
DKVDGFMFHMNCENKDADAFIEILDYISNTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGE
AIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIGSCSCLAGDQFCETQFDEALQ
IGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIELLNSFDYQDYKDSLGKG

Sequences:

>Translated_376_residues
MRFNENQLTTPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEVQLGHETFGGET
HAYSVGYSSHDINTVAPLSDKIIFNSLTQLATHFEAANPFASLGLRINPERSVAGQDLANPTRPYSRLGVKQDLLDLSIV
DKVDGFMFHMNCENKDADAFIEILDYISNTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGE
AIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIGSCSCLAGDQFCETQFDEALQ
IGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIELLNSFDYQDYKDSLGKG
>Mature_376_residues
MRFNENQLTTPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEVQLGHETFGGET
HAYSVGYSSHDINTVAPLSDKIIFNSLTQLATHFEAANPFASLGLRINPERSVAGQDLANPTRPYSRLGVKQDLLDLSIV
DKVDGFMFHMNCENKDADAFIEILDYISNTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGE
AIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIGSCSCLAGDQFCETQFDEALQ
IGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIELLNSFDYQDYKDSLGKG

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41798; Mature: 41798

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNENQLTTPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDG
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHCC
TTSSGPFEVQLGHETFGGETHAYSVGYSSHDINTVAPLSDKIIFNSLTQLATHFEAANPF
CCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCH
ASLGLRINPERSVAGQDLANPTRPYSRLGVKQDLLDLSIVDKVDGFMFHMNCENKDADAF
HHCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
IEILDYISNTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCC
AIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIG
EEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEECCCCCCCCCCCCCCCCCEEE
SCSCLAGDQFCETQFDEALQIGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIEL
CCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCHHHEEECCCCEEE
LNSFDYQDYKDSLGKG
EECCCCCHHHHHCCCC
>Mature Secondary Structure
MRFNENQLTTPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDG
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHCC
TTSSGPFEVQLGHETFGGETHAYSVGYSSHDINTVAPLSDKIIFNSLTQLATHFEAANPF
CCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCH
ASLGLRINPERSVAGQDLANPTRPYSRLGVKQDLLDLSIVDKVDGFMFHMNCENKDADAF
HHCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
IEILDYISNTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCC
AIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIG
EEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEECCCCCCCCCCCCCCCCCEEE
SCSCLAGDQFCETQFDEALQIGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIEL
CCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCHHHEEECCCCEEE
LNSFDYQDYKDSLGKG
EECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA