| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yajQ [C]
Identifier: 119945921
GI number: 119945921
Start: 2747462
End: 2747944
Strand: Reverse
Name: yajQ [C]
Synonym: Ping_2261
Alternate gene names: 119945921
Gene position: 2747944-2747462 (Counterclockwise)
Preceding gene: 119945923
Following gene: 119945919
Centisome position: 60.27
GC content: 38.72
Gene sequence:
>483_bases ATGCCATCATTTGATATTGTTTCAGAAATTGATACGTCTGAGCTTCAAAATGCCGTTGACAATGCTAACCGTGAACTTGC TACTCGCTTTGATTTTCGAGGTGTGAAAGCAAGTCTTTCAATCACTAATGACGTAGCAAAATTGTCAGCAGAGCATGATT CACAGTTAAGACAACTTATGGATCTGCTGCGTACAAATTTGATTAAGCGCGGAGTTGATTCGCGTGCAATGGATCCGGAA ACACCAAACCACACAGGGAAAACATGGACACAAGTTATTAAATTTAAAGAAGGGGTAGATCAACCAACTTCTAAGAAATT AATTAAACTTATTAAAGATAATAAAATGAAAGTTCAGGTTGCCGTGCAGGGTGAACAACTGCGTGTTACAGGAAAAAAAC GTGATGATTTACAGGCCGTGATGACCTTGATTAAAGGGACGGAGCTCGACCAGGCATTTCAGTTTAATAACTTTAGAGAT TAA
Upstream 100 bases:
>100_bases CAGCCTGAAATAATTATTTTAAAGATCATAACATAGATGAAATTGAAGTTTTCTGGTAACTTAGCGTTATTAAATTTTTA ATAAAAAACAGGATAATAAA
Downstream 100 bases:
>100_bases TTTAAAGAGGGTCGTAAAAAGGGTGTCCTTAACATCAAAAAGACTCGCTTATATCCGAATGACTTGAAAATGCATCTTCA AGTCATTCTAGGAGCTATTT
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPSFDIVSEIDTSELQNAVDNANRELATRFDFRGVKASLSITNDVAKLSAEHDSQLRQLMDLLRTNLIKRGVDSRAMDPE TPNHTGKTWTQVIKFKEGVDQPTSKKLIKLIKDNKMKVQVAVQGEQLRVTGKKRDDLQAVMTLIKGTELDQAFQFNNFRD
Sequences:
>Translated_160_residues MPSFDIVSEIDTSELQNAVDNANRELATRFDFRGVKASLSITNDVAKLSAEHDSQLRQLMDLLRTNLIKRGVDSRAMDPE TPNHTGKTWTQVIKFKEGVDQPTSKKLIKLIKDNKMKVQVAVQGEQLRVTGKKRDDLQAVMTLIKGTELDQAFQFNNFRD >Mature_159_residues PSFDIVSEIDTSELQNAVDNANRELATRFDFRGVKASLSITNDVAKLSAEHDSQLRQLMDLLRTNLIKRGVDSRAMDPET PNHTGKTWTQVIKFKEGVDQPTSKKLIKLIKDNKMKVQVAVQGEQLRVTGKKRDDLQAVMTLIKGTELDQAFQFNNFRD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=164, Percent_Identity=54.2682926829268, Blast_Score=185, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2261_PSYIN (A1SWY7)
Other databases:
- EMBL: CP000510 - RefSeq: YP_943601.1 - ProteinModelPortal: A1SWY7 - SMR: A1SWY7 - STRING: A1SWY7 - GeneID: 4627190 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2261 - eggNOG: COG1666 - HOGENOM: HBG290634 - OMA: LQFTNYR - PhylomeDB: A1SWY7 - ProtClustDB: PRK05412 - BioCyc: PING357804:PING_2261-MONOMER - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18133; Mature: 18002
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSEIDTSELQNAVDNANRELATRFDFRGVKASLSITNDVAKLSAEHDSQLRQLM CCCCHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH DLLRTNLIKRGVDSRAMDPETPNHTGKTWTQVIKFKEGVDQPTSKKLIKLIKDNKMKVQV HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE AVQGEQLRVTGKKRDDLQAVMTLIKGTELDQAFQFNNFRD EECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure PSFDIVSEIDTSELQNAVDNANRELATRFDFRGVKASLSITNDVAKLSAEHDSQLRQLM CCCHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH DLLRTNLIKRGVDSRAMDPETPNHTGKTWTQVIKFKEGVDQPTSKKLIKLIKDNKMKVQV HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEE AVQGEQLRVTGKKRDDLQAVMTLIKGTELDQAFQFNNFRD EECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA