| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yaiL [H]
Identifier: 119945920
GI number: 119945920
Start: 2746806
End: 2747348
Strand: Direct
Name: yaiL [H]
Synonym: Ping_2260
Alternate gene names: 119945920
Gene position: 2746806-2747348 (Clockwise)
Preceding gene: 119945918
Following gene: 119945922
Centisome position: 60.24
GC content: 36.83
Gene sequence:
>543_bases ATGGCTTCTCTACAAGAACAACTGATGAAATCCGGTCTTATCAACAAACAAAAAGCACAGCAGGTACAAACGGATAAACG CCGTAAAGCAAAACAAAAGAAGAAAAAAGGGAGCGTTGAAGTTTCTGACATGCAAATGTCGCTCAACGATCAAAAACAAC AAAATAAACAACAAGATCTGGATAAAAATAAAAAAACACAAGCAGAATTAGCGTTGCGCGCAGCACACGGTAAATTGATT CAGATGATTGCCCAACATTGCGAAAAGAATTATCAAGGTGAAATTGACTATCATTTTACCTATAACAACAAAGTTAAACG CATTGCAGTTGATAGTAAAACACAGCAGGGCTTGATTCGTGGTAACTTAGCGATTTGTGTATTAAATGAAGCATTTTATT TAATTAATAAAGAGGCAGCGGGCATATTAGCAGAGATTGATTCCTCAGTATTGGTCGCTTTACATGACACAAAAGAGCCA TTAGAAGCGCTCGAAGATGATCCTTACGCTGATTTTGCTATTCCAGATGATCTTATTTGGTAA
Upstream 100 bases:
>100_bases TTTTACAATAAATATGAGGGTTCCACGGAAATTTAGTTTCCTTCGCATATGTTTCCTCGCTAAACTACCCCATATACATA TTCAAGCATTAAGGTATTTT
Downstream 100 bases:
>100_bases ATTTATCCACTAAAAATAGCTCCTAGAATGACTTGAAGATGCATTTTCAAGTCATTCGGATATAAGCGAGTCTTTTTGAT GTTAAGGACACCCTTTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MASLQEQLMKSGLINKQKAQQVQTDKRRKAKQKKKKGSVEVSDMQMSLNDQKQQNKQQDLDKNKKTQAELALRAAHGKLI QMIAQHCEKNYQGEIDYHFTYNNKVKRIAVDSKTQQGLIRGNLAICVLNEAFYLINKEAAGILAEIDSSVLVALHDTKEP LEALEDDPYADFAIPDDLIW
Sequences:
>Translated_180_residues MASLQEQLMKSGLINKQKAQQVQTDKRRKAKQKKKKGSVEVSDMQMSLNDQKQQNKQQDLDKNKKTQAELALRAAHGKLI QMIAQHCEKNYQGEIDYHFTYNNKVKRIAVDSKTQQGLIRGNLAICVLNEAFYLINKEAAGILAEIDSSVLVALHDTKEP LEALEDDPYADFAIPDDLIW >Mature_179_residues ASLQEQLMKSGLINKQKAQQVQTDKRRKAKQKKKKGSVEVSDMQMSLNDQKQQNKQQDLDKNKKTQAELALRAAHGKLIQ MIAQHCEKNYQGEIDYHFTYNNKVKRIAVDSKTQQGLIRGNLAICVLNEAFYLINKEAAGILAEIDSSVLVALHDTKEPL EALEDDPYADFAIPDDLIW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=185, Percent_Identity=36.7567567567568, Blast_Score=90, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20441; Mature: 20309
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLQEQLMKSGLINKQKAQQVQTDKRRKAKQKKKKGSVEVSDMQMSLNDQKQQNKQQDL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHH DKNKKTQAELALRAAHGKLIQMIAQHCEKNYQGEIDYHFTYNNKVKRIAVDSKTQQGLIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCHHCCHHC GNLAICVLNEAFYLINKEAAGILAEIDSSVLVALHDTKEPLEALEDDPYADFAIPDDLIW CCEEEEEECCHHEEECHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHCCC >Mature Secondary Structure ASLQEQLMKSGLINKQKAQQVQTDKRRKAKQKKKKGSVEVSDMQMSLNDQKQQNKQQDL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHH DKNKKTQAELALRAAHGKLIQMIAQHCEKNYQGEIDYHFTYNNKVKRIAVDSKTQQGLIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCHHCCHHC GNLAICVLNEAFYLINKEAAGILAEIDSSVLVALHDTKEPLEALEDDPYADFAIPDDLIW CCEEEEEECCHHEEECHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]