| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945905
Identifier: 119945905
GI number: 119945905
Start: 2729540
End: 2730469
Strand: Direct
Name: 119945905
Synonym: Ping_2245
Alternate gene names: NA
Gene position: 2729540-2730469 (Clockwise)
Preceding gene: 119945904
Following gene: 119945917
Centisome position: 59.86
GC content: 37.31
Gene sequence:
>930_bases TTGTATAAACTAATTATTTACACGCTTATTTTATCATTTTACCCGCATTTCATCGCTGCAGAAGAGAACAACAAGGGTAT CTGCTTTAGTAAAAGCGAACAGCATAGCTTACTCGATGATAGCTACCATTATCTTAATACTAAATTTTGTCAGCCCGCCC CGTGGTTTGACAATTTTTTTATTGATCAAAAAACAACAAAAAATGTGCGCGCTGGTACTATGATACGTTGGTATAATGAT TTGATCTGGCTTGACGGCAAAGGTTTTTCATATGAGCCCAATATCAGTGCTCGACTCTACCTGCCAAAAATAAGTAAAAA ATTTAAAATCATTTTCGAGTCCGATACAAAAGATACAATCAAAGAACTGTTTCCAGATGACCAGTCCCAACAAACCAAAA ATGCATTAGGACTGAGCTATGATGTATCGGTCAAGACGCGCAGCAGTCTTAATATAAAAGCAACCTTACGCCCTGGTTTA GAAGTCAGCTATCGTTATATCTACCCTTTTACGCAGCAGACCTTATCGCGATTTACACAAAAAGTTTATCAAAACAAAAT GGTCACCGGTGAAATTACTTATTTTGATATTGACCATTCATTTAATGATAAATTTTTATTGCGCTGGGCAAACTTCGCCG GATTAGATACTGACGTTGAAGGTATTGAAATGGGAACGGGTTTGACCCTATACCATTACATCTCCCCCACTCAGGCACTC AATTACAGAGCCAGTATCAGCGCTAAAAATAAACCCGACTATTATATTGATAATACGCATTTAGGGTTAACCTATCGACA CAACATCATCCGCAGCTGGTTTTTTTATGAGCTATCTCCTGAAATAAACTGGCCAAAAAACAGCCTTCAGGAGCAAAGCA AAGATGTCTCTTTTACACTGCGCTTAGAAGTTATGTTTAAAAATATATAA
Upstream 100 bases:
>100_bases CAACTGCTAACTACCTCTTAAATTATAAATACCCTGTTCGTTAAGCGGGCTCGTTAAGTAGACTCGGTTTAATAATATTT ATTAATAGGTGACAGATCAC
Downstream 100 bases:
>100_bases TAACAATCACGGCCTTTAGCACAGCGTCAAAGTCCCCTACCTCTGTTTATCGTCTATCGACTCAGATCCTTAAAAAAGAG CAGAAATTTCGCTTAATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MYKLIIYTLILSFYPHFIAAEENNKGICFSKSEQHSLLDDSYHYLNTKFCQPAPWFDNFFIDQKTTKNVRAGTMIRWYND LIWLDGKGFSYEPNISARLYLPKISKKFKIIFESDTKDTIKELFPDDQSQQTKNALGLSYDVSVKTRSSLNIKATLRPGL EVSYRYIYPFTQQTLSRFTQKVYQNKMVTGEITYFDIDHSFNDKFLLRWANFAGLDTDVEGIEMGTGLTLYHYISPTQAL NYRASISAKNKPDYYIDNTHLGLTYRHNIIRSWFFYELSPEINWPKNSLQEQSKDVSFTLRLEVMFKNI
Sequences:
>Translated_309_residues MYKLIIYTLILSFYPHFIAAEENNKGICFSKSEQHSLLDDSYHYLNTKFCQPAPWFDNFFIDQKTTKNVRAGTMIRWYND LIWLDGKGFSYEPNISARLYLPKISKKFKIIFESDTKDTIKELFPDDQSQQTKNALGLSYDVSVKTRSSLNIKATLRPGL EVSYRYIYPFTQQTLSRFTQKVYQNKMVTGEITYFDIDHSFNDKFLLRWANFAGLDTDVEGIEMGTGLTLYHYISPTQAL NYRASISAKNKPDYYIDNTHLGLTYRHNIIRSWFFYELSPEINWPKNSLQEQSKDVSFTLRLEVMFKNI >Mature_309_residues MYKLIIYTLILSFYPHFIAAEENNKGICFSKSEQHSLLDDSYHYLNTKFCQPAPWFDNFFIDQKTTKNVRAGTMIRWYND LIWLDGKGFSYEPNISARLYLPKISKKFKIIFESDTKDTIKELFPDDQSQQTKNALGLSYDVSVKTRSSLNIKATLRPGL EVSYRYIYPFTQQTLSRFTQKVYQNKMVTGEITYFDIDHSFNDKFLLRWANFAGLDTDVEGIEMGTGLTLYHYISPTQAL NYRASISAKNKPDYYIDNTHLGLTYRHNIIRSWFFYELSPEINWPKNSLQEQSKDVSFTLRLEVMFKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36361; Mature: 36361
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLIIYTLILSFYPHFIAAEENNKGICFSKSEQHSLLDDSYHYLNTKFCQPAPWFDNFF CHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCHHCCCHHHHCCCCCCCCCCCCCEE IDQKTTKNVRAGTMIRWYNDLIWLDGKGFSYEPNISARLYLPKISKKFKIIFESDTKDTI ECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHH KELFPDDQSQQTKNALGLSYDVSVKTRSSLNIKATLRPGLEVSYRYIYPFTQQTLSRFTQ HHHCCCCCCHHHHHHCCEEEEEEEEECCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHH KVYQNKMVTGEITYFDIDHSFNDKFLLRWANFAGLDTDVEGIEMGTGLTLYHYISPTQAL HHHHCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCHHC NYRASISAKNKPDYYIDNTHLGLTYRHNIIRSWFFYELSPEINWPKNSLQEQSKDVSFTL CEEEEECCCCCCCEEECCEEEEEEEHHHHHHEEEEEEECCCCCCCHHHHHHHCCCEEEEE RLEVMFKNI EEEEEEECC >Mature Secondary Structure MYKLIIYTLILSFYPHFIAAEENNKGICFSKSEQHSLLDDSYHYLNTKFCQPAPWFDNFF CHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCHHCCCHHHHCCCCCCCCCCCCCEE IDQKTTKNVRAGTMIRWYNDLIWLDGKGFSYEPNISARLYLPKISKKFKIIFESDTKDTI ECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHH KELFPDDQSQQTKNALGLSYDVSVKTRSSLNIKATLRPGLEVSYRYIYPFTQQTLSRFTQ HHHCCCCCCHHHHHHCCEEEEEEEEECCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHH KVYQNKMVTGEITYFDIDHSFNDKFLLRWANFAGLDTDVEGIEMGTGLTLYHYISPTQAL HHHHCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCHHC NYRASISAKNKPDYYIDNTHLGLTYRHNIIRSWFFYELSPEINWPKNSLQEQSKDVSFTL CEEEEECCCCCCCEEECCEEEEEEEHHHHHHEEEEEEECCCCCCCHHHHHHHCCCEEEEE RLEVMFKNI EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA