| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yaeQ [H]
Identifier: 119945888
GI number: 119945888
Start: 2711379
End: 2711918
Strand: Reverse
Name: yaeQ [H]
Synonym: Ping_2228
Alternate gene names: 119945888
Gene position: 2711918-2711379 (Counterclockwise)
Preceding gene: 119945889
Following gene: 119945887
Centisome position: 59.48
GC content: 40.19
Gene sequence:
>540_bases ATGGCACTGAAACCGACAATTTTTAAAATGAACATCAATCTATCGGATCTTAATAATGATCGTTATGACACCCTTAATCT AACCGTTGCCCAGCATCCTTCAGAAACACAAGAACGTATGATGGCGCGTGTGATGGCTTATTGTCTTAATGCACAAGAGT TTTTAAGCTTTACCAAAGGGCTGTCGGTTGCGGATGATCCGGATATCTGGGCAAAAAGCTTAGATGATCAACTTTTATTA TGGATTGATCTCGGTGAGCCGGCTTTTGAACGAATTAAAAAAGCGTCACGTTTAGCCAAAGCTGTTAAGGTTTATAGTTT TAACAGCAAATCAGCGGTCTGGTGGAAACAATCCTTAACGGATTTTGGGAAACTTAATAATGTCGAGGTTTATCAGTTTA ATTTTGAACAGATAAAGGCTTTAGCGAAGTTGGTCAAACGTACCATGGATTATTCGGTCACTATTGCGGGAGACACGCTC TATATAGCGACTGAGCTGGGCGAGTGTGAAATCAGCTGTAACGCGTTACAAGTTAAATAA
Upstream 100 bases:
>100_bases GTGCAGAACTGGCTAAGATGCCCGTTGCATAAATAAACTGCAAAATAAAAAATAAAAAGCCACGTTGAAACGTGGCTTTT TTCTTTAAATTGGAAAAATA
Downstream 100 bases:
>100_bases AAGACTGTTTTATCTTTCTCCCATAAATCTTATTAAAAATAAGAGGCTACAGTAAGCAAATATATTTTCGATCTCATTTT TTCCTGATTAATAGAAGTGA
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MALKPTIFKMNINLSDLNNDRYDTLNLTVAQHPSETQERMMARVMAYCLNAQEFLSFTKGLSVADDPDIWAKSLDDQLLL WIDLGEPAFERIKKASRLAKAVKVYSFNSKSAVWWKQSLTDFGKLNNVEVYQFNFEQIKALAKLVKRTMDYSVTIAGDTL YIATELGECEISCNALQVK
Sequences:
>Translated_179_residues MALKPTIFKMNINLSDLNNDRYDTLNLTVAQHPSETQERMMARVMAYCLNAQEFLSFTKGLSVADDPDIWAKSLDDQLLL WIDLGEPAFERIKKASRLAKAVKVYSFNSKSAVWWKQSLTDFGKLNNVEVYQFNFEQIKALAKLVKRTMDYSVTIAGDTL YIATELGECEISCNALQVK >Mature_178_residues ALKPTIFKMNINLSDLNNDRYDTLNLTVAQHPSETQERMMARVMAYCLNAQEFLSFTKGLSVADDPDIWAKSLDDQLLLW IDLGEPAFERIKKASRLAKAVKVYSFNSKSAVWWKQSLTDFGKLNNVEVYQFNFEQIKALAKLVKRTMDYSVTIAGDTLY IATELGECEISCNALQVK
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=178, Percent_Identity=37.0786516853933, Blast_Score=131, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20389; Mature: 20257
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKPTIFKMNINLSDLNNDRYDTLNLTVAQHPSETQERMMARVMAYCLNAQEFLSFTKG CCCCCEEEEEEEEHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHC LSVADDPDIWAKSLDDQLLLWIDLGEPAFERIKKASRLAKAVKVYSFNSKSAVWWKQSLT CCCCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHH DFGKLNNVEVYQFNFEQIKALAKLVKRTMDYSVTIAGDTLYIATELGECEISCNALQVK HHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEECEEEEEC >Mature Secondary Structure ALKPTIFKMNINLSDLNNDRYDTLNLTVAQHPSETQERMMARVMAYCLNAQEFLSFTKG CCCCEEEEEEEEHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHC LSVADDPDIWAKSLDDQLLLWIDLGEPAFERIKKASRLAKAVKVYSFNSKSAVWWKQSLT CCCCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHH DFGKLNNVEVYQFNFEQIKALAKLVKRTMDYSVTIAGDTLYIATELGECEISCNALQVK HHHCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]