| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yebT [H]
Identifier: 119945883
GI number: 119945883
Start: 2704242
End: 2706914
Strand: Direct
Name: yebT [H]
Synonym: Ping_2223
Alternate gene names: 119945883
Gene position: 2704242-2706914 (Clockwise)
Preceding gene: 119945882
Following gene: 119945884
Centisome position: 59.31
GC content: 39.99
Gene sequence:
>2673_bases ATGAACGAACAAGATTCAATGACAGAGGCAACAATCCTCAAGTCACAAACAATATCGCCCATCTGGTTTCTTCCTGCAGT TGCTGCACTTTTGGGTGCCTGGTTTTTATTTCAAAATATAACCCATGCTAATACGACCATTAAAATACACTTTGAACATG CGGAAAGCATCATAGTTGATAAAACGAAACTGCATTACAAAGGCGTGATCATTGGTACTGTCAAAAAAGTGGAGTTGGAT GCCACCAGCGGTGTGAATATTATTGCAGAAATTGAATCTCACGCCAAATTTATGCTCCGTAAGAACACCAAATTTTGGTT GGTTTCACCCAAAGCGTCACTCACTTCCATAACCGGTTTAGATACCCTTTTTTCTGGTAGTTATATTAATCTGCAACGTG GTGAAGGGGAGTATACAACTAATTTTATAGCACAAACAGAGCAGCCCATTAACATTCCTGAAAACGCACGGCTCATTAAT CTACAAAGTGACAATGCGGATTCTATTAATGTCGGGACACCATTATTCTACAGGAATATTAAAGTGGGTGAAGTTGCCGC GATCCGTTTAGAGCAATCAGGAAAAACTGTCAATATTAGCGCATTTGTTGATGGTGAATATAAACATCTGGTTAAAAATA ACAGTAAATTTTGGAATATTAGCGGGTTAAGCGCCAATGTCTCACCAGCAGGTATCGATATATCCCTCAATAGCATCACT TCCTTAATTGCAGGCGGTATTACCTTTTCCTCACCTGAGGACGGTGAAACACTTAAAAACGAGGCTCAATTTCAATTATT TAATAATATTGATGACAGTAAAACAGGGCTCTCTATAGAGCTAATTACAAATAAAATCAATAACTTACCAAATGGCGCCG GCATTTTATTTAAAGGTTTTGGTATTGGCAGAATAACGGATATTCAATATTCTATAAAGGATCAGCAGTTTGTTGTCTCG GCGCTTATTAACCCTCAGTTTAGTGAATTGATCACTGACGGATCACAATTTTGGATTGAGCAGACATCATTCACCTTTGC AAAAATAAAAAATATTGGCAATGTCATTAAAGGGGATTATATTGCTTTTCAACCCGTTGAAAAAAACCAATTAAGCCACC GTAAAAAATCCACACGTTTTCTTATTCAGCAGGCAGCGCCCGCGAAAGCTTCGGTCCTTTCTCTGCTGGTATTAACCGAA GATGCTACCGGACTAAACCCGGAAGCCCCCATTACTTATCAAGGGCTAAAAATAGGGAAAATAACGGCTTTAGATTTTTC AGAAAAGGCTGGGTTTATCGCGGTCCACATTGATATTGACCAGCAGTATCACTATCTAATTAATAAAAACAGCCAATTTT ATCTGCTCAACGGGGTAAATTTCAACGCGTCATTAAAAGGGATAGAGGTTCAATCTACCCCCCTTGAAAATTTAATTTCT GGTGGCATAGGCTTGTATAATAAAAAACCGGTTAATCAATCACACACGGTTGCATTTTTAAATAAAGATCAACTATTTAG ATTATACCCCTCAAAGGCACTAGTAAAAATGGGCCTTAATGTTTTCAGCCAACCTGGCATTGTTCACCTTTTAAGCAGAG AATTACCCTCTGTGAGCGAAGGCTCTCCAGTTTATTATAGAAAATTGCCGATTGGCGAAGTGAGTGGTTTTTCTATTGAT AATTCAGGTTTAATGCAGACCACCCTCAGCATTAAAGGACAATATAAACATCTTATCAATGATCAGAGTGTCTTTTGGAA CATCAGTGGTTTTAGTGCGGAAGCCGGTCTTAGCGGTTTGAAAATACAAGCCGAGTCTTTATTAGCCATTGCCGCAGGCG GAATTGCGGTGGGTCCGGGCCATCGGGAGATCGACAATAAACACAGTAATGGTAAATACAAACTTTTTAATAACCAGAAA CAGGCAACCACCCCCACGACTTTAATCAGTTTAACCTTTAATCAAGCAAAGGATTTACAAACAGGCAGCCCGTTACGCCT TAAAGGATTAGTTGTTGGTGAGGTTACTAATTTAACACTCACATCACAACAGAAAGTGCAGGCAACGGTCAATCTTAAAC CCGAATTTGCCAAGCAGGTGGCACGCAAAGGTAGCCGGTTTTGGATGGTAACGAGTACAGCGAGCTTATCGGGTGTTAAA AATTTATCAACCTTAGTGACCGGGGCCTATATTAATGTCTCCCCTGGTGAAGGGATCTCTGAAAAACATTTTAGCGGTGA AGACTCCGAGCCACTTATTGGACCCAATCAATCCGGATTACGCCTTATTTTGGTTGCAGATAATGCCGGCTCTAGTGACA TAAGCAGCCCTGTCTATCACCGCCAAATCCAGATAGGACAAGTAATTTCAAAACGCTTATCCTATAATTCTTCAGGGGTA GAAATCACCGTTAACATAACCCCCAAATATGCCCATTTAATTCGTCAAAATTCTATTTTTTGGCCTGCTTCTGGATTTAA CTTAGAGTTTGGTATCACAGGTGCCGCCTTAAAAGCGACCTCTTTAACCTCTTTAATTAAGGGAGGGATAAGTATGAGTA CGCCAGATAACCAACCGTTACAACCTGCAAGCGATCCATTGTCTCGTTTTCAGCTAGAAAATGAAATCCAGGAAGAATGG TTAAATTGGAGATTAGCTATCCCTAGACCTTAG
Upstream 100 bases:
>100_bases ATCCGGGAATAGCGGCCTCTTCATTCACTATAGTGGTGTTAACCACCCTCTTTGCTGCAAACAGTTTTGATACGCGTTTA ATTTGGGATGCTAAAAAATA
Downstream 100 bases:
>100_bases ACTTAGAAATAAAAAATAAAAAATCCGGCAATATCTTATACCGTGCGTATCTCTCGCGCACATTTAAAGGAATTATAATG CACAGTAAGACCCGACTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 890; Mature: 890
Protein sequence:
>890_residues MNEQDSMTEATILKSQTISPIWFLPAVAALLGAWFLFQNITHANTTIKIHFEHAESIIVDKTKLHYKGVIIGTVKKVELD ATSGVNIIAEIESHAKFMLRKNTKFWLVSPKASLTSITGLDTLFSGSYINLQRGEGEYTTNFIAQTEQPINIPENARLIN LQSDNADSINVGTPLFYRNIKVGEVAAIRLEQSGKTVNISAFVDGEYKHLVKNNSKFWNISGLSANVSPAGIDISLNSIT SLIAGGITFSSPEDGETLKNEAQFQLFNNIDDSKTGLSIELITNKINNLPNGAGILFKGFGIGRITDIQYSIKDQQFVVS ALINPQFSELITDGSQFWIEQTSFTFAKIKNIGNVIKGDYIAFQPVEKNQLSHRKKSTRFLIQQAAPAKASVLSLLVLTE DATGLNPEAPITYQGLKIGKITALDFSEKAGFIAVHIDIDQQYHYLINKNSQFYLLNGVNFNASLKGIEVQSTPLENLIS GGIGLYNKKPVNQSHTVAFLNKDQLFRLYPSKALVKMGLNVFSQPGIVHLLSRELPSVSEGSPVYYRKLPIGEVSGFSID NSGLMQTTLSIKGQYKHLINDQSVFWNISGFSAEAGLSGLKIQAESLLAIAAGGIAVGPGHREIDNKHSNGKYKLFNNQK QATTPTTLISLTFNQAKDLQTGSPLRLKGLVVGEVTNLTLTSQQKVQATVNLKPEFAKQVARKGSRFWMVTSTASLSGVK NLSTLVTGAYINVSPGEGISEKHFSGEDSEPLIGPNQSGLRLILVADNAGSSDISSPVYHRQIQIGQVISKRLSYNSSGV EITVNITPKYAHLIRQNSIFWPASGFNLEFGITGAALKATSLTSLIKGGISMSTPDNQPLQPASDPLSRFQLENEIQEEW LNWRLAIPRP
Sequences:
>Translated_890_residues MNEQDSMTEATILKSQTISPIWFLPAVAALLGAWFLFQNITHANTTIKIHFEHAESIIVDKTKLHYKGVIIGTVKKVELD ATSGVNIIAEIESHAKFMLRKNTKFWLVSPKASLTSITGLDTLFSGSYINLQRGEGEYTTNFIAQTEQPINIPENARLIN LQSDNADSINVGTPLFYRNIKVGEVAAIRLEQSGKTVNISAFVDGEYKHLVKNNSKFWNISGLSANVSPAGIDISLNSIT SLIAGGITFSSPEDGETLKNEAQFQLFNNIDDSKTGLSIELITNKINNLPNGAGILFKGFGIGRITDIQYSIKDQQFVVS ALINPQFSELITDGSQFWIEQTSFTFAKIKNIGNVIKGDYIAFQPVEKNQLSHRKKSTRFLIQQAAPAKASVLSLLVLTE DATGLNPEAPITYQGLKIGKITALDFSEKAGFIAVHIDIDQQYHYLINKNSQFYLLNGVNFNASLKGIEVQSTPLENLIS GGIGLYNKKPVNQSHTVAFLNKDQLFRLYPSKALVKMGLNVFSQPGIVHLLSRELPSVSEGSPVYYRKLPIGEVSGFSID NSGLMQTTLSIKGQYKHLINDQSVFWNISGFSAEAGLSGLKIQAESLLAIAAGGIAVGPGHREIDNKHSNGKYKLFNNQK QATTPTTLISLTFNQAKDLQTGSPLRLKGLVVGEVTNLTLTSQQKVQATVNLKPEFAKQVARKGSRFWMVTSTASLSGVK NLSTLVTGAYINVSPGEGISEKHFSGEDSEPLIGPNQSGLRLILVADNAGSSDISSPVYHRQIQIGQVISKRLSYNSSGV EITVNITPKYAHLIRQNSIFWPASGFNLEFGITGAALKATSLTSLIKGGISMSTPDNQPLQPASDPLSRFQLENEIQEEW LNWRLAIPRP >Mature_890_residues MNEQDSMTEATILKSQTISPIWFLPAVAALLGAWFLFQNITHANTTIKIHFEHAESIIVDKTKLHYKGVIIGTVKKVELD ATSGVNIIAEIESHAKFMLRKNTKFWLVSPKASLTSITGLDTLFSGSYINLQRGEGEYTTNFIAQTEQPINIPENARLIN LQSDNADSINVGTPLFYRNIKVGEVAAIRLEQSGKTVNISAFVDGEYKHLVKNNSKFWNISGLSANVSPAGIDISLNSIT SLIAGGITFSSPEDGETLKNEAQFQLFNNIDDSKTGLSIELITNKINNLPNGAGILFKGFGIGRITDIQYSIKDQQFVVS ALINPQFSELITDGSQFWIEQTSFTFAKIKNIGNVIKGDYIAFQPVEKNQLSHRKKSTRFLIQQAAPAKASVLSLLVLTE DATGLNPEAPITYQGLKIGKITALDFSEKAGFIAVHIDIDQQYHYLINKNSQFYLLNGVNFNASLKGIEVQSTPLENLIS GGIGLYNKKPVNQSHTVAFLNKDQLFRLYPSKALVKMGLNVFSQPGIVHLLSRELPSVSEGSPVYYRKLPIGEVSGFSID NSGLMQTTLSIKGQYKHLINDQSVFWNISGFSAEAGLSGLKIQAESLLAIAAGGIAVGPGHREIDNKHSNGKYKLFNNQK QATTPTTLISLTFNQAKDLQTGSPLRLKGLVVGEVTNLTLTSQQKVQATVNLKPEFAKQVARKGSRFWMVTSTASLSGVK NLSTLVTGAYINVSPGEGISEKHFSGEDSEPLIGPNQSGLRLILVADNAGSSDISSPVYHRQIQIGQVISKRLSYNSSGV EITVNITPKYAHLIRQNSIFWPASGFNLEFGITGAALKATSLTSLIKGGISMSTPDNQPLQPASDPLSRFQLENEIQEEW LNWRLAIPRP
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=904, Percent_Identity=29.9778761061947, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1787184, Length=314, Percent_Identity=30.5732484076433, Blast_Score=163, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 97261; Mature: 97261
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQDSMTEATILKSQTISPIWFLPAVAALLGAWFLFQNITHANTTIKIHFEHAESIIVD CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEE KTKLHYKGVIIGTVKKVELDATSGVNIIAEIESHAKFMLRKNTKFWLVSPKASLTSITGL CEEEEEEEEEEEEEEEEEEECCCCCEEEEEEHHHHEEEEECCCEEEEECCCCCCEEECCH DTLFSGSYINLQRGEGEYTTNFIAQTEQPINIPENARLINLQSDNADSINVGTPLFYRNI HHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCEEEECC KVGEVAAIRLEQSGKTVNISAFVDGEYKHLVKNNSKFWNISGLSANVSPAGIDISLNSIT EECCEEEEEEECCCCEEEEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCEEEEEHHHHH SLIAGGITFSSPEDGETLKNEAQFQLFNNIDDSKTGLSIELITNKINNLPNGAGILFKGF HHHHCCEECCCCCCCCHHHCCCEEEEECCCCCCCCCEEEEEEEHHHHCCCCCCEEEEECC GIGRITDIQYSIKDQQFVVSALINPQFSELITDGSQFWIEQTSFTFAKIKNIGNVIKGDY CCCEEEEEEEECCCHHEEEEHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCHHHCCCE IAFQPVEKNQLSHRKKSTRFLIQQAAPAKASVLSLLVLTEDATGLNPEAPITYQGLKIGK EEECCCCHHHHHHHHHHHHHHEECCCCCHHHEEEEEEEECCCCCCCCCCCEEECCEEEEE ITALDFSEKAGFIAVHIDIDQQYHYLINKNSQFYLLNGVNFNASLKGIEVQSTPLENLIS EEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEECCCHHHHHC GGIGLYNKKPVNQSHTVAFLNKDQLFRLYPSKALVKMGLNVFSQPGIVHLLSRELPSVSE CCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHCHHHHCCCCHHHHHHHCCCCCCC GSPVYYRKLPIGEVSGFSIDNSGLMQTTLSIKGQYKHLINDQSVFWNISGFSAEAGLSGL CCCEEEEECCCCCCCCCEECCCCCEEEEEEECCHHHHHCCCCEEEEEEECCCCCCCCCCE KIQAESLLAIAAGGIAVGPGHREIDNKHSNGKYKLFNNQKQATTPTTLISLTFNQAKDLQ EEECCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCC TGSPLRLKGLVVGEVTNLTLTSQQKVQATVNLKPEFAKQVARKGSRFWMVTSTASLSGVK CCCCEEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCHH NLSTLVTGAYINVSPGEGISEKHFSGEDSEPLIGPNQSGLRLILVADNAGSSDISSPVYH HHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH RQIQIGQVISKRLSYNSSGVEITVNITPKYAHLIRQNSIFWPASGFNLEFGITGAALKAT HHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHH SLTSLIKGGISMSTPDNQPLQPASDPLSRFQLENEIQEEWLNWRLAIPRP HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCC >Mature Secondary Structure MNEQDSMTEATILKSQTISPIWFLPAVAALLGAWFLFQNITHANTTIKIHFEHAESIIVD CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEE KTKLHYKGVIIGTVKKVELDATSGVNIIAEIESHAKFMLRKNTKFWLVSPKASLTSITGL CEEEEEEEEEEEEEEEEEEECCCCCEEEEEEHHHHEEEEECCCEEEEECCCCCCEEECCH DTLFSGSYINLQRGEGEYTTNFIAQTEQPINIPENARLINLQSDNADSINVGTPLFYRNI HHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCEEEECC KVGEVAAIRLEQSGKTVNISAFVDGEYKHLVKNNSKFWNISGLSANVSPAGIDISLNSIT EECCEEEEEEECCCCEEEEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCEEEEEHHHHH SLIAGGITFSSPEDGETLKNEAQFQLFNNIDDSKTGLSIELITNKINNLPNGAGILFKGF HHHHCCEECCCCCCCCHHHCCCEEEEECCCCCCCCCEEEEEEEHHHHCCCCCCEEEEECC GIGRITDIQYSIKDQQFVVSALINPQFSELITDGSQFWIEQTSFTFAKIKNIGNVIKGDY CCCEEEEEEEECCCHHEEEEHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCHHHCCCE IAFQPVEKNQLSHRKKSTRFLIQQAAPAKASVLSLLVLTEDATGLNPEAPITYQGLKIGK EEECCCCHHHHHHHHHHHHHHEECCCCCHHHEEEEEEEECCCCCCCCCCCEEECCEEEEE ITALDFSEKAGFIAVHIDIDQQYHYLINKNSQFYLLNGVNFNASLKGIEVQSTPLENLIS EEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEECCCHHHHHC GGIGLYNKKPVNQSHTVAFLNKDQLFRLYPSKALVKMGLNVFSQPGIVHLLSRELPSVSE CCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHCHHHHCCCCHHHHHHHCCCCCCC GSPVYYRKLPIGEVSGFSIDNSGLMQTTLSIKGQYKHLINDQSVFWNISGFSAEAGLSGL CCCEEEEECCCCCCCCCEECCCCCEEEEEEECCHHHHHCCCCEEEEEEECCCCCCCCCCE KIQAESLLAIAAGGIAVGPGHREIDNKHSNGKYKLFNNQKQATTPTTLISLTFNQAKDLQ EEECCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCC TGSPLRLKGLVVGEVTNLTLTSQQKVQATVNLKPEFAKQVARKGSRFWMVTSTASLSGVK CCCCEEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCHH NLSTLVTGAYINVSPGEGISEKHFSGEDSEPLIGPNQSGLRLILVADNAGSSDISSPVYH HHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH RQIQIGQVISKRLSYNSSGVEITVNITPKYAHLIRQNSIFWPASGFNLEFGITGAALKAT HHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHH SLTSLIKGGISMSTPDNQPLQPASDPLSRFQLENEIQEEWLNWRLAIPRP HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]