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The map label for this gene is secF [H]

Identifier: 119945871

GI number: 119945871

Start: 2693427

End: 2694371

Strand: Reverse

Name: secF [H]

Synonym: Ping_2211

Alternate gene names: 119945871

Gene position: 2694371-2693427 (Counterclockwise)

Preceding gene: 119945872

Following gene: 119945870

Centisome position: 59.09

GC content: 40.85

Gene sequence:

>945_bases
ATGTTTGAGTTAATTAAATCGAAAAAAACGCTGCCTTTTATGCAATATTCGAAACCGGCATCTTGGTTTTCAATGTTCTT
AATTGTCGCTTCAGTTGCCGCGTTAAGTATTAACTGGTTAAACTGGGGCCTTGATTTTACCGGTGGGACTGTTATTGAAG
TTGGTTTTGAGCAACCTGCTGTATTACCCGATGTGCGTGATGTATTAGCATCGAATGATTTCTCCGATGCAGTTGTTCAG
CATTTCGGCACTAGCCGTGATGTTATGATCCGCTTAGCACCTCGAGAAGGCGTTCGAGGAGAAGTTATCGGGACTCAGGT
GCTAGAGTCATTACAGAATGCCGATTTCGGACAAGTGGATATGCGCCGGATTGAATTTGTTGGGCCTAATGTGGGGGCTG
AATTAGCAAATTCCGGTGGTTTAGCTATTATTATTGCGCTTATCTGTATTTTAATTTATGTCAGTATTCGCTTTGAATGG
CGCTTGGCGTGCGGCTCTGTGTTAGCTTTAGCACACGATATTATTATAACACTCGGATTTTTCTCATTATTTAAAATTGA
AGTGGATTTAACCGTATTAGCCGCTTTATTGGCTGTTGTTGGTTATTCTCTCAACGATACTATTGTAGTATTTGACCGAA
TACGTGAAAATTTCCGCTTACTGACAACGGCAACTTCAAATGATATTGTCGATAAATCGCTTACACAGACCTTAAGCCGT
ACCTTAATTACCTCAGGAACCACTATTTTTGTATTGATTTCACTGTTTATTTTTGGCGGTGCATTGATCCATGGTTTTGC
AACGGCATTATTGATTGGTGTTATCGTGGGTACTTACTCCTCCATTTATGTGGCCAGTGCACTGGCAATTAAATTAGGTA
TTTCCCGTGAGCATATGATTCCAGAAGTTGTTGAAAAAGAGGGGGCAGATCAAGACCCCTTATAG

Upstream 100 bases:

>100_bases
CTATGTTTACTTCTATTTTTGGAACACGCGCTATTGTAAACGCTGTCTGGGGTGGTCGTAATGATATTAAGAAACTATCA
ATCTAGCGCAAGGAAATATT

Downstream 100 bases:

>100_bases
TAGATAAATTGGACAGCTAAAAAGCACTGCATGCAGTGCTTTTTTTATTTCAAAATATATCTAACTTTACTTTCAGCTTG
TTATAGTTCACTCTTAACTC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MFELIKSKKTLPFMQYSKPASWFSMFLIVASVAALSINWLNWGLDFTGGTVIEVGFEQPAVLPDVRDVLASNDFSDAVVQ
HFGTSRDVMIRLAPREGVRGEVIGTQVLESLQNADFGQVDMRRIEFVGPNVGAELANSGGLAIIIALICILIYVSIRFEW
RLACGSVLALAHDIIITLGFFSLFKIEVDLTVLAALLAVVGYSLNDTIVVFDRIRENFRLLTTATSNDIVDKSLTQTLSR
TLITSGTTIFVLISLFIFGGALIHGFATALLIGVIVGTYSSIYVASALAIKLGISREHMIPEVVEKEGADQDPL

Sequences:

>Translated_314_residues
MFELIKSKKTLPFMQYSKPASWFSMFLIVASVAALSINWLNWGLDFTGGTVIEVGFEQPAVLPDVRDVLASNDFSDAVVQ
HFGTSRDVMIRLAPREGVRGEVIGTQVLESLQNADFGQVDMRRIEFVGPNVGAELANSGGLAIIIALICILIYVSIRFEW
RLACGSVLALAHDIIITLGFFSLFKIEVDLTVLAALLAVVGYSLNDTIVVFDRIRENFRLLTTATSNDIVDKSLTQTLSR
TLITSGTTIFVLISLFIFGGALIHGFATALLIGVIVGTYSSIYVASALAIKLGISREHMIPEVVEKEGADQDPL
>Mature_314_residues
MFELIKSKKTLPFMQYSKPASWFSMFLIVASVAALSINWLNWGLDFTGGTVIEVGFEQPAVLPDVRDVLASNDFSDAVVQ
HFGTSRDVMIRLAPREGVRGEVIGTQVLESLQNADFGQVDMRRIEFVGPNVGAELANSGGLAIIIALICILIYVSIRFEW
RLACGSVLALAHDIIITLGFFSLFKIEVDLTVLAALLAVVGYSLNDTIVVFDRIRENFRLLTTATSNDIVDKSLTQTLSR
TLITSGTTIFVLISLFIFGGALIHGFATALLIGVIVGTYSSIYVASALAIKLGISREHMIPEVVEKEGADQDPL

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=310, Percent_Identity=53.5483870967742, Blast_Score=341, Evalue=4e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34177; Mature: 34177

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELIKSKKTLPFMQYSKPASWFSMFLIVASVAALSINWLNWGLDFTGGTVIEVGFEQPA
CCCHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHEECEECCCCEEEEECCCCCC
VLPDVRDVLASNDFSDAVVQHFGTSRDVMIRLAPREGVRGEVIGTQVLESLQNADFGQVD
CCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHH
MRRIEFVGPNVGAELANSGGLAIIIALICILIYVSIRFEWRLACGSVLALAHDIIITLGF
HHHHEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSLFKIEVDLTVLAALLAVVGYSLNDTIVVFDRIRENFRLLTTATSNDIVDKSLTQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHH
TLITSGTTIFVLISLFIFGGALIHGFATALLIGVIVGTYSSIYVASALAIKLGISREHMI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PEVVEKEGADQDPL
HHHHHHCCCCCCCC
>Mature Secondary Structure
MFELIKSKKTLPFMQYSKPASWFSMFLIVASVAALSINWLNWGLDFTGGTVIEVGFEQPA
CCCHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHEECEECCCCEEEEECCCCCC
VLPDVRDVLASNDFSDAVVQHFGTSRDVMIRLAPREGVRGEVIGTQVLESLQNADFGQVD
CCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHH
MRRIEFVGPNVGAELANSGGLAIIIALICILIYVSIRFEWRLACGSVLALAHDIIITLGF
HHHHEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSLFKIEVDLTVLAALLAVVGYSLNDTIVVFDRIRENFRLLTTATSNDIVDKSLTQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHH
TLITSGTTIFVLISLFIFGGALIHGFATALLIGVIVGTYSSIYVASALAIKLGISREHMI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PEVVEKEGADQDPL
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]