| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945799
Identifier: 119945799
GI number: 119945799
Start: 2603227
End: 2603961
Strand: Reverse
Name: 119945799
Synonym: Ping_2136
Alternate gene names: NA
Gene position: 2603961-2603227 (Counterclockwise)
Preceding gene: 119945800
Following gene: 119945798
Centisome position: 57.11
GC content: 34.42
Gene sequence:
>735_bases ATGCCAACGTTAAAAGATTATTTAGGCTCTCTGGTAAAAGATTTGAACTATGCACGGGTCATCGCCGATGTGGAGTCTGC CAATATTGCCAAGATGTACGCTGAAGATGAGTTGTTAAAGCATTTTTCCATTCCCAGAATGAAGATAGATGATACTGAGT TGACTATCCCTATTGCTATCGATGAACTGGAAATGACTGTTGAGAAAGATTATCAACCCATTGATAATACATTATTTTAT GCCATTACGTATGCAGAGGTGAAAAATATTTTTAAAGTGTCGAGCTTTAACAGGGAGATTTCAACATCTTTAAGAAAATC AATTTATTTGCAAATTGATAGTTTGGAAAAATCAATAAAAAGTGGCGCAGAGATAAAAATATCGTTGGAGAGTTTTAGTG AAACGGTGTCTGATATTGCAATAGAAACGATCATCAGTGATAAAAAAGGGCGTGTTATTTTTGATGAAACGCTTAAAAAA AATAATATGAATGATGAGAAAATCAAAGAAAAACTCATGATGAATTTGGTAAAACAGCTTCAACCGGCAATAAAAAAAAG AGCAGTAGCTGGAAAAATTGAAAGTGCCAAAATAACGGTTGAGAGTGATAAACTGAGAGAAAAAAAGCCGGAAACTCTGC TTTATATTAAGATGAAGATTACTGAAGAGAGTATGGAGTGGCAGGTGATGGAAGATGCTGATGGTAATATAGTCTCCAAA TTGATGGTAGAGTAA
Upstream 100 bases:
>100_bases ACCCGAGAGCCGAGTTTTCATCATAAATGCCTGATCCAGATAATGGCCGAATGTGCGTCATTTATCTGGGTTAGGCATTT TAAAACTACAAGGAAATAGT
Downstream 100 bases:
>100_bases TTATGAAATACTCCTACATCGACGCGTATGAGGATTTGCTAAAGCAATGTTTATTTATCCCTGATCTGGTCACAAAATCA GCCAATAAAGAGTTGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPTLKDYLGSLVKDLNYARVIADVESANIAKMYAEDELLKHFSIPRMKIDDTELTIPIAIDELEMTVEKDYQPIDNTLFY AITYAEVKNIFKVSSFNREISTSLRKSIYLQIDSLEKSIKSGAEIKISLESFSETVSDIAIETIISDKKGRVIFDETLKK NNMNDEKIKEKLMMNLVKQLQPAIKKRAVAGKIESAKITVESDKLREKKPETLLYIKMKITEESMEWQVMEDADGNIVSK LMVE
Sequences:
>Translated_244_residues MPTLKDYLGSLVKDLNYARVIADVESANIAKMYAEDELLKHFSIPRMKIDDTELTIPIAIDELEMTVEKDYQPIDNTLFY AITYAEVKNIFKVSSFNREISTSLRKSIYLQIDSLEKSIKSGAEIKISLESFSETVSDIAIETIISDKKGRVIFDETLKK NNMNDEKIKEKLMMNLVKQLQPAIKKRAVAGKIESAKITVESDKLREKKPETLLYIKMKITEESMEWQVMEDADGNIVSK LMVE >Mature_243_residues PTLKDYLGSLVKDLNYARVIADVESANIAKMYAEDELLKHFSIPRMKIDDTELTIPIAIDELEMTVEKDYQPIDNTLFYA ITYAEVKNIFKVSSFNREISTSLRKSIYLQIDSLEKSIKSGAEIKISLESFSETVSDIAIETIISDKKGRVIFDETLKKN NMNDEKIKEKLMMNLVKQLQPAIKKRAVAGKIESAKITVESDKLREKKPETLLYIKMKITEESMEWQVMEDADGNIVSKL MVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27930; Mature: 27799
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLKDYLGSLVKDLNYARVIADVESANIAKMYAEDELLKHFSIPRMKIDDTELTIPIAI CCCHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEE DELEMTVEKDYQPIDNTLFYAITYAEVKNIFKVSSFNREISTSLRKSIYLQIDSLEKSIK HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHHHHHH SGAEIKISLESFSETVSDIAIETIISDKKGRVIFDETLKKNNMNDEKIKEKLMMNLVKQL CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHH QPAIKKRAVAGKIESAKITVESDKLREKKPETLLYIKMKITEESMEWQVMEDADGNIVSK HHHHHHHHHHCCCCCEEEEEECHHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH LMVE HHCC >Mature Secondary Structure PTLKDYLGSLVKDLNYARVIADVESANIAKMYAEDELLKHFSIPRMKIDDTELTIPIAI CCHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEE DELEMTVEKDYQPIDNTLFYAITYAEVKNIFKVSSFNREISTSLRKSIYLQIDSLEKSIK HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHHHHHH SGAEIKISLESFSETVSDIAIETIISDKKGRVIFDETLKKNNMNDEKIKEKLMMNLVKQL CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHH QPAIKKRAVAGKIESAKITVESDKLREKKPETLLYIKMKITEESMEWQVMEDADGNIVSK HHHHHHHHHHCCCCCEEEEEECHHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH LMVE HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA