| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is bax [H]
Identifier: 119945776
GI number: 119945776
Start: 2569537
End: 2570466
Strand: Reverse
Name: bax [H]
Synonym: Ping_2111
Alternate gene names: 119945776
Gene position: 2570466-2569537 (Counterclockwise)
Preceding gene: 119945777
Following gene: 119945772
Centisome position: 56.37
GC content: 41.72
Gene sequence:
>930_bases ATGAAAAAATTCTTTTCTGCCCGCTATATTGCTTTAGCACTGATCAGCTGTTTATTGATAGCTGCCTGTTCTTATGTACT GAACAGCAATACTAGTGAAAGTGAAAAACTGATGGCAAACCCCGTTGAAGTCACTATCACGTCGCTCGATGATTTGAATA CTTTATTTGATAAATATCAGTACAACGATGAAAACTGGGATAAAGGCAACCGTGAAGTACCGCGTATTACTTTTGAGGGG GTTGGGAAGCACTGGGCTGAGGGATCCAAAAAACTGCCCGTAGAGACCAAAAAAATGATATTTTTTCGTCTGATGACACC ACTGGCATTAGTTTCTAATGAAAATATCTTACGTGAACGGGAAATTGTTAAAAGCAGTCCGCTAGAGGCAAGCAAACTTA AAAAAATAGCCATTAAATACCGCATTATTGAAGATAAGACAGCCGAGTTAGATCAAAAAATGCGCACAGCATTATTGGCC CGCGTTGATATTTTACCCCCGTCGTTAGCACTGGCGCAAGCGGCTGAAGAGAGTGGTTGGGCGACCTCTCGTTTTGCGCA GGAAGGGAATGCTTTCTTTGGTCAGTGGGATTTTACCGGTAACGGGATGAAACCTCGGGCCCACCGAGAAGAGCTGGGTG ACTATGGCGTTGCGCGCTTTGATAGTCCACTTGCTTCAGTTGAAGCTTATATGCTCAACATTAACAGTAATAGTGCATAT CAAAAATTACGTATTTTACGCAGTGAACTGCGTGCTAATGATAAAGCGGTCACGGGCATTAAATTAGCGGGTACCTTGGA TAAATATTCCGAGCGAGGACAAGAATATATTCATGGACTGCGTGCCATGATCCGTTATAACAACCTTGAGCAAGTCGATC AGGCGTATTTATCTGATAATAAATTAATCCATTTAATTACAGAAAAATAA
Upstream 100 bases:
>100_bases TTTATTATAACGAAAGACACCTTAGCACCTTAAATTAACAGCAAAGCTGCTTAAGCGCATTAATATATTTACCGCTATTT TACTCTGAGGAACTCTCCCC
Downstream 100 bases:
>100_bases TGGTTCGTTCTTTATAATATCTACAAAAAATAAGTTTATAAAACCGATCAAAGAAGCGTGTTCGCACAGGCTTCTTTTAT TCTTAATCCGCTGCATATTT
Product: transcriptional regulator, Fis family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKKFFSARYIALALISCLLIAACSYVLNSNTSESEKLMANPVEVTITSLDDLNTLFDKYQYNDENWDKGNREVPRITFEG VGKHWAEGSKKLPVETKKMIFFRLMTPLALVSNENILREREIVKSSPLEASKLKKIAIKYRIIEDKTAELDQKMRTALLA RVDILPPSLALAQAAEESGWATSRFAQEGNAFFGQWDFTGNGMKPRAHREELGDYGVARFDSPLASVEAYMLNINSNSAY QKLRILRSELRANDKAVTGIKLAGTLDKYSERGQEYIHGLRAMIRYNNLEQVDQAYLSDNKLIHLITEK
Sequences:
>Translated_309_residues MKKFFSARYIALALISCLLIAACSYVLNSNTSESEKLMANPVEVTITSLDDLNTLFDKYQYNDENWDKGNREVPRITFEG VGKHWAEGSKKLPVETKKMIFFRLMTPLALVSNENILREREIVKSSPLEASKLKKIAIKYRIIEDKTAELDQKMRTALLA RVDILPPSLALAQAAEESGWATSRFAQEGNAFFGQWDFTGNGMKPRAHREELGDYGVARFDSPLASVEAYMLNINSNSAY QKLRILRSELRANDKAVTGIKLAGTLDKYSERGQEYIHGLRAMIRYNNLEQVDQAYLSDNKLIHLITEK >Mature_309_residues MKKFFSARYIALALISCLLIAACSYVLNSNTSESEKLMANPVEVTITSLDDLNTLFDKYQYNDENWDKGNREVPRITFEG VGKHWAEGSKKLPVETKKMIFFRLMTPLALVSNENILREREIVKSSPLEASKLKKIAIKYRIIEDKTAELDQKMRTALLA RVDILPPSLALAQAAEESGWATSRFAQEGNAFFGQWDFTGNGMKPRAHREELGDYGVARFDSPLASVEAYMLNINSNSAY QKLRILRSELRANDKAVTGIKLAGTLDKYSERGQEYIHGLRAMIRYNNLEQVDQAYLSDNKLIHLITEK
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=207, Percent_Identity=34.7826086956522, Blast_Score=98, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 35056; Mature: 35056
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFSARYIALALISCLLIAACSYVLNSNTSESEKLMANPVEVTITSLDDLNTLFDKYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHC YNDENWDKGNREVPRITFEGVGKHWAEGSKKLPVETKKMIFFRLMTPLALVSNENILRER CCCCCCCCCCCCCCEEEHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH EIVKSSPLEASKLKKIAIKYRIIEDKTAELDQKMRTALLARVDILPPSLALAQAAEESGW HHHHCCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC ATSRFAQEGNAFFGQWDFTGNGMKPRAHREELGDYGVARFDSPLASVEAYMLNINSNSAY HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHCCHHHHHEEEEEEECCCHHH QKLRILRSELRANDKAVTGIKLAGTLDKYSERGQEYIHGLRAMIRYNNLEQVDQAYLSDN HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC KLIHLITEK CEEEEEECC >Mature Secondary Structure MKKFFSARYIALALISCLLIAACSYVLNSNTSESEKLMANPVEVTITSLDDLNTLFDKYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHC YNDENWDKGNREVPRITFEGVGKHWAEGSKKLPVETKKMIFFRLMTPLALVSNENILRER CCCCCCCCCCCCCCEEEHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH EIVKSSPLEASKLKKIAIKYRIIEDKTAELDQKMRTALLARVDILPPSLALAQAAEESGW HHHHCCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC ATSRFAQEGNAFFGQWDFTGNGMKPRAHREELGDYGVARFDSPLASVEAYMLNINSNSAY HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHCCHHHHHEEEEEEECCCHHH QKLRILRSELRANDKAVTGIKLAGTLDKYSERGQEYIHGLRAMIRYNNLEQVDQAYLSDN HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC KLIHLITEK CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]