| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945737
Identifier: 119945737
GI number: 119945737
Start: 2515153
End: 2515617
Strand: Reverse
Name: 119945737
Synonym: Ping_2066
Alternate gene names: NA
Gene position: 2515617-2515153 (Counterclockwise)
Preceding gene: 119945738
Following gene: 119945736
Centisome position: 55.17
GC content: 35.91
Gene sequence:
>465_bases ATGTTAATAGTAGAATATTTGAGCAAAAGTTATCATCGATTCTTACCCGATTTAGCTGAGCATGCCAACCTAAAGTCTCG TTTTCTGATCACTCTAAATGGGCCCAATAGCAGTGAACTAAGTGCGATTATTCGTGATATCACTCGTTTTACAAAAAAAT CGGTACAAGTATCTACAGCGATTTCAGATAAAGAAACGAATGAAGGCGTTGGTGAAATATTCCAAAACGCTAAAATTAGT CGCGATATTTTGCTATTTTCTGGCGCTGATTCATTACTTGAGAAACGTGCAGGTATTCGAGGATCCCATGATCGAGATGA AAATTTTGATCTTAATGATTTACAGAAAAATATTGCCAATCACAATGGTATTGTGATTCTTGCGACAGAGCAGAAACAAA TATTGACTTCATCAATGTCTTCAAAAGTGAATGTGCTGATTCGTTTCCCTGTAGCAGATAAATAA
Upstream 100 bases:
>100_bases CTGATCAGTAATAAATTTTCACGATCATTGCAAAAGCACTTGCTGATCCCGTTATCTTTAGGTAGCTTCGTCGTAATAAT TAAGTCATAAAGAGAAATAT
Downstream 100 bases:
>100_bases TTTGTCTTTTTTAAAATAAAGTGTGATTTTAAACGCGGAGTACCCTGTGCGCGTCTAAAGTCGTACTTGAAAAATAATAG AACGCATTGTTATCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLIVEYLSKSYHRFLPDLAEHANLKSRFLITLNGPNSSELSAIIRDITRFTKKSVQVSTAISDKETNEGVGEIFQNAKIS RDILLFSGADSLLEKRAGIRGSHDRDENFDLNDLQKNIANHNGIVILATEQKQILTSSMSSKVNVLIRFPVADK
Sequences:
>Translated_154_residues MLIVEYLSKSYHRFLPDLAEHANLKSRFLITLNGPNSSELSAIIRDITRFTKKSVQVSTAISDKETNEGVGEIFQNAKIS RDILLFSGADSLLEKRAGIRGSHDRDENFDLNDLQKNIANHNGIVILATEQKQILTSSMSSKVNVLIRFPVADK >Mature_154_residues MLIVEYLSKSYHRFLPDLAEHANLKSRFLITLNGPNSSELSAIIRDITRFTKKSVQVSTAISDKETNEGVGEIFQNAKIS RDILLFSGADSLLEKRAGIRGSHDRDENFDLNDLQKNIANHNGIVILATEQKQILTSSMSSKVNVLIRFPVADK
Specific function: Unknown
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17214; Mature: 17214
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVEYLSKSYHRFLPDLAEHANLKSRFLITLNGPNSSELSAIIRDITRFTKKSVQVSTA CEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEC ISDKETNEGVGEIFQNAKISRDILLFSGADSLLEKRAGIRGSHDRDENFDLNDLQKNIAN CCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC HNGIVILATEQKQILTSSMSSKVNVLIRFPVADK CCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure MLIVEYLSKSYHRFLPDLAEHANLKSRFLITLNGPNSSELSAIIRDITRFTKKSVQVSTA CEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEC ISDKETNEGVGEIFQNAKISRDILLFSGADSLLEKRAGIRGSHDRDENFDLNDLQKNIAN CCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC HNGIVILATEQKQILTSSMSSKVNVLIRFPVADK CCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA