| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945711
Identifier: 119945711
GI number: 119945711
Start: 2477461
End: 2478252
Strand: Reverse
Name: 119945711
Synonym: Ping_2031
Alternate gene names: NA
Gene position: 2478252-2477461 (Counterclockwise)
Preceding gene: 119945712
Following gene: 119945707
Centisome position: 54.35
GC content: 39.77
Gene sequence:
>792_bases ATGAATCAGAAAACCCAATTAACAGAACGAGAGAAATTTACTGCTTTGGAGGTGAATGCGAGTTATGTATCAGCCCCAAG AATGTCACGCAAGCATATTGGTTTAGTGCAACTAAGTACAGATCATACCTTAGAAATGGATTGGGCGAAATTGATTGGCG AACAAGCAGCCGTGTTTAGTTCAAGGGTTTATTATAGTGGTGATATGCGACCGGCTGCGCTAGATACAATTGCAACCGGT ATATCAAAGACAGCTCAGTTAATTGCAACTGATTTACCTATGGATGTTATGGCATTCGGCTGCACATCTGCAACGATGGT GATCGGTGAAAATAGAGTAGGGCAGTTGTTACGTGAAGGTCGTGGTGATATTCCAACAACGAATCCTTGGACTGCCGCAC AAGCCGCATTTAAAAAACTGGGCGCAAAAAAAATTGCAATATTTTCACCTTATCCGTCAGATGTTAATTTCTTTCTTTAT CAGCAATTAATGAAAGCAGGCTTTGAGATTGTTGCATTAACCTCTCTAGGTATAAAAAAAGATACAGAGATCACCACTAT TTCAAAACAATCTATGATTGATGCGCTTGATAAAATGCTTATCAATAGTGATGCGGACTTAGTGTTTATGTCTTGCACTA ATTTGCGTGTACTGGATCATATTGAGCTTTTCGAATCTATGTATAAACGTCCATTTGTAAGCAGTAATTCAGCTATGTTT TGGCATGCTATGGCACTAACGGGGACAAATGCTCATTGCCCTGGTTTTGGGCGTCTACTTAACGCTAATTAG
Upstream 100 bases:
>100_bases AATCAAAATAAAAAAACTTACAAAAACCGCGGCGGCACCCAATGCGGATAAACTAAATATCCTAATGAATAGCGTGTAAA GAGTCAATTAAGGTGATGGT
Downstream 100 bases:
>100_bases CCACGCTAGGGATAAAGTTTCAATTTAATTGGACTAAAATATGCGTTTCACAATCATAGTGATCCATTGATTATTTTTAT CTGTTTTCAAACATAGGTTA
Product: Asp/Glu racemase
Products: NA
Alternate protein names: Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase; Decarboxylase; Ectoine Utilization Protein EutA; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Superfamily; Pyridoxal-5-Phosphate-Dependent Beta Subunit; Racemase; Isomerase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNQKTQLTEREKFTALEVNASYVSAPRMSRKHIGLVQLSTDHTLEMDWAKLIGEQAAVFSSRVYYSGDMRPAALDTIATG ISKTAQLIATDLPMDVMAFGCTSATMVIGENRVGQLLREGRGDIPTTNPWTAAQAAFKKLGAKKIAIFSPYPSDVNFFLY QQLMKAGFEIVALTSLGIKKDTEITTISKQSMIDALDKMLINSDADLVFMSCTNLRVLDHIELFESMYKRPFVSSNSAMF WHAMALTGTNAHCPGFGRLLNAN
Sequences:
>Translated_263_residues MNQKTQLTEREKFTALEVNASYVSAPRMSRKHIGLVQLSTDHTLEMDWAKLIGEQAAVFSSRVYYSGDMRPAALDTIATG ISKTAQLIATDLPMDVMAFGCTSATMVIGENRVGQLLREGRGDIPTTNPWTAAQAAFKKLGAKKIAIFSPYPSDVNFFLY QQLMKAGFEIVALTSLGIKKDTEITTISKQSMIDALDKMLINSDADLVFMSCTNLRVLDHIELFESMYKRPFVSSNSAMF WHAMALTGTNAHCPGFGRLLNAN >Mature_263_residues MNQKTQLTEREKFTALEVNASYVSAPRMSRKHIGLVQLSTDHTLEMDWAKLIGEQAAVFSSRVYYSGDMRPAALDTIATG ISKTAQLIATDLPMDVMAFGCTSATMVIGENRVGQLLREGRGDIPTTNPWTAAQAAFKKLGAKKIAIFSPYPSDVNFFLY QQLMKAGFEIVALTSLGIKKDTEITTISKQSMIDALDKMLINSDADLVFMSCTNLRVLDHIELFESMYKRPFVSSNSAMF WHAMALTGTNAHCPGFGRLLNAN
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29023; Mature: 29023
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKTQLTEREKFTALEVNASYVSAPRMSRKHIGLVQLSTDHTLEMDWAKLIGEQAAVFS CCCCCCCHHHHCEEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHH SRVYYSGDMRPAALDTIATGISKTAQLIATDLPMDVMAFGCTSATMVIGENRVGQLLREG CCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCHHHHHHHHCC RGDIPTTNPWTAAQAAFKKLGAKKIAIFSPYPSDVNFFLYQQLMKAGFEIVALTSLGIKK CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC DTEITTISKQSMIDALDKMLINSDADLVFMSCTNLRVLDHIELFESMYKRPFVSSNSAMF CCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEE WHAMALTGTNAHCPGFGRLLNAN EEEEEEECCCCCCCCCCEEECCC >Mature Secondary Structure MNQKTQLTEREKFTALEVNASYVSAPRMSRKHIGLVQLSTDHTLEMDWAKLIGEQAAVFS CCCCCCCHHHHCEEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHH SRVYYSGDMRPAALDTIATGISKTAQLIATDLPMDVMAFGCTSATMVIGENRVGQLLREG CCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCHHHHHHHHCC RGDIPTTNPWTAAQAAFKKLGAKKIAIFSPYPSDVNFFLYQQLMKAGFEIVALTSLGIKK CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC DTEITTISKQSMIDALDKMLINSDADLVFMSCTNLRVLDHIELFESMYKRPFVSSNSAMF CCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEE WHAMALTGTNAHCPGFGRLLNAN EEEEEEECCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA