| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yddG [H]
Identifier: 119945639
GI number: 119945639
Start: 2372870
End: 2373796
Strand: Direct
Name: yddG [H]
Synonym: Ping_1951
Alternate gene names: 119945639
Gene position: 2372870-2373796 (Clockwise)
Preceding gene: 119945637
Following gene: 119945640
Centisome position: 52.04
GC content: 44.01
Gene sequence:
>927_bases TTGAATAACATACATAAATGCACCATTGCAGGCTGCTTGGCTATTCTAATATGGAGTACAACGGTTGGGTTGGTGCGCAA TGTGGCGGAACAATTAGGTCCTATTGGTGGTGCTGCAATGATTTATTCTGTGAGTGCTGTGTTTCTTTTGGTATTTCTTG GTGCGCCCCGCTTTAAAGTCTTCTCGTTAAAATACCTTCTGATCGGTGGAACACTGTTTGTCAGCTATGAAATTTGCTTA TCGCTTGCCTTGGGAATGGCTAATAACCGCATTCAAGCAGTCGAAATGGGCGTCATTAATTATTTGTGGCCATCTTTAGT GGTATTACTCGCGGTGTTTACCAGTAAGAAGCCGGTTGATAAAAGACTTTATCCGGCGATAGCCCTGTCGTTTTTTGGTG TAGCTTGGACGGTGAGTGGTGATGGCGGGCTTTCGATTAGTCAATTGGCCGGTAATATAGCAACCAACCCTTTAAGTTAC TCAATGGCGCTCGGTGGGGCTTTTATTTGGGCATTTTACTGCAATATCACTAAGCGACTGGCGAACGGAAGAAATGCTAT TACCTGGTTCTTTATCGCCACCGCGATAGCTTTGTGGATCACCTATTTTATGAGTAATGAACCTGCCATCGCTTTTACAT CAGGTGCGGCAGTTGATTTATTGATAACGGGCGTTGCGATGGGCAGCGGATATGCATTATGGAACATAGGTATTATTGGC GGCAATATGATGCTGCTGGCAACCCTGTCATATTTCACGCCTTTATTATCTACTTTCTTCTCCGCATTGATTTTGAATAT TGAACTCACTGCAACGTTTTGGCAAGGCGTGGTAATGGTGACTATTGCCTCCTTACTTTGTTGGTGGTTTACCCGAGAAA AACCTTCTCCTGCAGTAGATGTTACCCGACCTATCAAGGTTGAATAA
Upstream 100 bases:
>100_bases ATTCATAATACATTCACTTATTTTTGCTTCATATAATAAGCCGTATTTGTTAGCCTTCATTATCGTGCAAATCTGATAGA CAAACACAAAAGGAATTATC
Downstream 100 bases:
>100_bases GTTGCCATATGTTGCCATATGTTGAACGTTGTCAAATTAACAAGCTTCTCATTCAGAATAGCCCGGTGTCAGACTCATTT TTGATAACGATTAGAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE
Sequences:
>Translated_308_residues MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE >Mature_308_residues MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKVFSLKYLLIGGTLFVSYEICL SLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVDKRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSY SMALGGAFIWAFYCNITKRLANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVDVTRPIKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=289, Percent_Identity=45.6747404844291, Blast_Score=267, Evalue=7e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33304; Mature: 33304
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEH FSLKYLLIGGTLFVSYEICLSLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVD EEEEHHEECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH KRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSYSMALGGAFIWAFYCNITKRL HHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEEEEEC GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVD CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VTRPIKVE CCCCCCCC >Mature Secondary Structure MNNIHKCTIAGCLAILIWSTTVGLVRNVAEQLGPIGGAAMIYSVSAVFLLVFLGAPRFKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEH FSLKYLLIGGTLFVSYEICLSLALGMANNRIQAVEMGVINYLWPSLVVLLAVFTSKKPVD EEEEHHEECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH KRLYPAIALSFFGVAWTVSGDGGLSISQLAGNIATNPLSYSMALGGAFIWAFYCNITKRL HHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ANGRNAITWFFIATAIALWITYFMSNEPAIAFTSGAAVDLLITGVAMGSGYALWNIGIIG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEEEEEC GNMMLLATLSYFTPLLSTFFSALILNIELTATFWQGVVMVTIASLLCWWFTREKPSPAVD CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VTRPIKVE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]