| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945602
Identifier: 119945602
GI number: 119945602
Start: 2328157
End: 2329749
Strand: Direct
Name: 119945602
Synonym: Ping_1908
Alternate gene names: NA
Gene position: 2328157-2329749 (Clockwise)
Preceding gene: 119945599
Following gene: 119945603
Centisome position: 51.06
GC content: 35.91
Gene sequence:
>1593_bases ATGGGCCAATTAGCATATTTACCGAATAGCACACAACTGACGAATAACTATTTATTTATAGAGCACAGCTTTCCGGAACT TTATCGTTTAAGCCAAGAGGTAGAAAAACACTATTCAACGGATCACTCCTGCTGTTTACTAAAAGCGCGCATGTTTGTTG AACTGTGGTGCCATGAAGTAGGAGCAAAACTAAATTTATATCCTCCCATCACTGGAGACTTAAATAGCAAAATAAAGCAA ATTTCATATAGTCATAAAGTGCCGGGTTATATTCTTGATACACTGAATAAGTTGCGTATTGAAGGGAATAAAAGTGCTCA TATTTTAAAACGTTATGATGGTTCATGGAGTTGTGAATACGCATTAAGTAAATACAAGTTAGATAACTTAATGAAAAGCT TATTAGAGATAACCCAATACCTTGCTTATAAATTAAATATGCAAAACGATTCTGAGCTTAATGTGTGGCAAGAACCCACT AAGTTAGCACTGCAAGAAGATATTTATGGATCACTCTTAGGTAATAAAGAAGCGACATATTCACTTGCTAAACATTATGC AATAAAAATGCAGCAAGCAACTGAACATAATCAAATATCAGGCAAAGAAAATAAAGCAAAAATGCAATTACTGCAACATG ATTTAGCTTACTGGTTGGCTCGTGCGCATAAGCAGGATCACCAGGAAACCTGGTTACTTTATGCCGAAGTTTATAAAAAT AAATTCCTGCCATTACCAGAAAATATAACCGTTGAAAGTTGTTTTAAAGAAGCTTTAAAAAATGATGATTCAGGTGAAGT CCCCTCTCAATATGCGGCATACCTGTTACAAAATTCTCAACATAAACGTGGTGTTAACTTCATACATCAAGCCGCTGAAA AAGCTAACCACGATGCCATTAAAGCGCTACAAACCTATTATTACGAAAAAGACCAAAAACAGTATTTAAAGTGGGTTGAT GCAGGCATTAATGCCTACGTAAAACAGTCTTTTATCTTAGACTTCGCACATAAATTAGATGTTTGGGAAAAAGACAAAGA AAATCAACTCCTTCAAAAACAGGTTAAAACAGCACTCATTAATGCGCAATCACATCAGTCGGAGGGTCTAAAATACTTTC AAGGTTATTGTGATTATTATGGTTATTGGGGTAAAAATTCCAATCCAGAGCAAGGTTTAAATCTCATGGTTGATAGTCAT GAGCAACTTCCTGCTTTCCTTCATTATGAAGATAAACTATTTAACCTGTTAAAAAATAAACCTGAGCATTCAGATCTTGC ATTAGAGATTTCAAACAGAGCGCTATCTTGCACTAGTGGGACAAGCAAAGCGCAAATGCAGTTTGACCTTGCAATGTTAA TTTGGCAAAAACTGCGAGCAGATCACCAAGTGAAATGTTCTCATTCACTAAAAGTACTGATCAGGGAATCAGCAAAAAGT GGCTGTGTTGATGCCCAGCAATTTATGAAATCCCCGAAAGGAAAAGCATTAATGCAGGATAACAGTGTTATATGCCAAAA TAATGGCAAAAAATCAGTCGATAGGAAGAAATTACAACAAGCGAAAAAAAACGCGCGCAGAGCGAAACGCTAA
Upstream 100 bases:
>100_bases TTCTGATTAACCTAACACTTCACAAGCTTATCAACCACATAAAGTTTGTGGCTTGTCTATTATTAAACTCAAGGGATCAC ACAATTTGAGGATAATAACC
Downstream 100 bases:
>100_bases TAAATCACCTAACTATATGAAATATAAATCAAAAAATAAGCTATTAAAGCTAGTATCACAGGCACTCTTTGGGTACAGTG AAATATTACCTTTGTTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MGQLAYLPNSTQLTNNYLFIEHSFPELYRLSQEVEKHYSTDHSCCLLKARMFVELWCHEVGAKLNLYPPITGDLNSKIKQ ISYSHKVPGYILDTLNKLRIEGNKSAHILKRYDGSWSCEYALSKYKLDNLMKSLLEITQYLAYKLNMQNDSELNVWQEPT KLALQEDIYGSLLGNKEATYSLAKHYAIKMQQATEHNQISGKENKAKMQLLQHDLAYWLARAHKQDHQETWLLYAEVYKN KFLPLPENITVESCFKEALKNDDSGEVPSQYAAYLLQNSQHKRGVNFIHQAAEKANHDAIKALQTYYYEKDQKQYLKWVD AGINAYVKQSFILDFAHKLDVWEKDKENQLLQKQVKTALINAQSHQSEGLKYFQGYCDYYGYWGKNSNPEQGLNLMVDSH EQLPAFLHYEDKLFNLLKNKPEHSDLALEISNRALSCTSGTSKAQMQFDLAMLIWQKLRADHQVKCSHSLKVLIRESAKS GCVDAQQFMKSPKGKALMQDNSVICQNNGKKSVDRKKLQQAKKNARRAKR
Sequences:
>Translated_530_residues MGQLAYLPNSTQLTNNYLFIEHSFPELYRLSQEVEKHYSTDHSCCLLKARMFVELWCHEVGAKLNLYPPITGDLNSKIKQ ISYSHKVPGYILDTLNKLRIEGNKSAHILKRYDGSWSCEYALSKYKLDNLMKSLLEITQYLAYKLNMQNDSELNVWQEPT KLALQEDIYGSLLGNKEATYSLAKHYAIKMQQATEHNQISGKENKAKMQLLQHDLAYWLARAHKQDHQETWLLYAEVYKN KFLPLPENITVESCFKEALKNDDSGEVPSQYAAYLLQNSQHKRGVNFIHQAAEKANHDAIKALQTYYYEKDQKQYLKWVD AGINAYVKQSFILDFAHKLDVWEKDKENQLLQKQVKTALINAQSHQSEGLKYFQGYCDYYGYWGKNSNPEQGLNLMVDSH EQLPAFLHYEDKLFNLLKNKPEHSDLALEISNRALSCTSGTSKAQMQFDLAMLIWQKLRADHQVKCSHSLKVLIRESAKS GCVDAQQFMKSPKGKALMQDNSVICQNNGKKSVDRKKLQQAKKNARRAKR >Mature_529_residues GQLAYLPNSTQLTNNYLFIEHSFPELYRLSQEVEKHYSTDHSCCLLKARMFVELWCHEVGAKLNLYPPITGDLNSKIKQI SYSHKVPGYILDTLNKLRIEGNKSAHILKRYDGSWSCEYALSKYKLDNLMKSLLEITQYLAYKLNMQNDSELNVWQEPTK LALQEDIYGSLLGNKEATYSLAKHYAIKMQQATEHNQISGKENKAKMQLLQHDLAYWLARAHKQDHQETWLLYAEVYKNK FLPLPENITVESCFKEALKNDDSGEVPSQYAAYLLQNSQHKRGVNFIHQAAEKANHDAIKALQTYYYEKDQKQYLKWVDA GINAYVKQSFILDFAHKLDVWEKDKENQLLQKQVKTALINAQSHQSEGLKYFQGYCDYYGYWGKNSNPEQGLNLMVDSHE QLPAFLHYEDKLFNLLKNKPEHSDLALEISNRALSCTSGTSKAQMQFDLAMLIWQKLRADHQVKCSHSLKVLIRESAKSG CVDAQQFMKSPKGKALMQDNSVICQNNGKKSVDRKKLQQAKKNARRAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61316; Mature: 61184
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLAYLPNSTQLTNNYLFIEHSFPELYRLSQEVEKHYSTDHSCCLLKARMFVELWCHEV CCCEEECCCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GAKLNLYPPITGDLNSKIKQISYSHKVPGYILDTLNKLRIEGNKSAHILKRYDGSWSCEY CCCEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHCCCCCCHHH ALSKYKLDNLMKSLLEITQYLAYKLNMQNDSELNVWQEPTKLALQEDIYGSLLGNKEATY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH SLAKHYAIKMQQATEHNQISGKENKAKMQLLQHDLAYWLARAHKQDHQETWLLYAEVYKN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC KFLPLPENITVESCFKEALKNDDSGEVPSQYAAYLLQNSQHKRGVNFIHQAAEKANHDAI CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH KALQTYYYEKDQKQYLKWVDAGINAYVKQSFILDFAHKLDVWEKDKENQLLQKQVKTALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NAQSHQSEGLKYFQGYCDYYGYWGKNSNPEQGLNLMVDSHEQLPAFLHYEDKLFNLLKNK CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCC PEHSDLALEISNRALSCTSGTSKAQMQFDLAMLIWQKLRADHQVKCSHSLKVLIRESAKS CCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC GCVDAQQFMKSPKGKALMQDNSVICQNNGKKSVDRKKLQQAKKNARRAKR CCCCHHHHHCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GQLAYLPNSTQLTNNYLFIEHSFPELYRLSQEVEKHYSTDHSCCLLKARMFVELWCHEV CCEEECCCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GAKLNLYPPITGDLNSKIKQISYSHKVPGYILDTLNKLRIEGNKSAHILKRYDGSWSCEY CCCEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHCCCCCCHHH ALSKYKLDNLMKSLLEITQYLAYKLNMQNDSELNVWQEPTKLALQEDIYGSLLGNKEATY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH SLAKHYAIKMQQATEHNQISGKENKAKMQLLQHDLAYWLARAHKQDHQETWLLYAEVYKN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC KFLPLPENITVESCFKEALKNDDSGEVPSQYAAYLLQNSQHKRGVNFIHQAAEKANHDAI CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH KALQTYYYEKDQKQYLKWVDAGINAYVKQSFILDFAHKLDVWEKDKENQLLQKQVKTALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NAQSHQSEGLKYFQGYCDYYGYWGKNSNPEQGLNLMVDSHEQLPAFLHYEDKLFNLLKNK CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCC PEHSDLALEISNRALSCTSGTSKAQMQFDLAMLIWQKLRADHQVKCSHSLKVLIRESAKS CCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC GCVDAQQFMKSPKGKALMQDNSVICQNNGKKSVDRKKLQQAKKNARRAKR CCCCHHHHHCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA