| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is kbl [C]
Identifier: 119945548
GI number: 119945548
Start: 2251491
End: 2252684
Strand: Direct
Name: kbl [C]
Synonym: Ping_1852
Alternate gene names: 119945548
Gene position: 2251491-2252684 (Clockwise)
Preceding gene: 119945547
Following gene: 119945549
Centisome position: 49.38
GC content: 41.88
Gene sequence:
>1194_bases ATGTCTAATAAATTCTATCAACAAATCAATCAACAAATCGAACAAGTCAAAAATGATGGCCTTTATAAATCAGAGCGAAT TATTACATCAGCTCAACAAGCCTTAGTATCAATAGCAAGTGGTGAGCAGGTGCTTAATTTTTGTGCCAATAACTATCTTG GTTTAGCAAACCATCCTGAGTTGATTGCAGCTGCTAAAAAAGGGCTGGATCAACAAGGTTTTGGTATGGCCTCCGTACGT TTTATTTGCGGTACTCAAGACAAGCATAAAGCTTTGGAAGCCAAGCTCTCTGGCTTTTTAGGCATGGAAGATACGATTCT TTATACTTCCTGTTTTGACGCTAATACCGGTTTATTTGAAACTATTTTGAATGCCGATGATGCCATTATTTCAGATGCGT TAAATCATGCTTCTATTATAGATGGTGTACGTTTATGCAAAGCTAAACGTTTCCGTTATGCAAATAATAATATGGCTGAA TTAGAAGAGCAGTTAATCGCCGCAGAAAAAGCCGGTGCGCGCAATACATTGATTGTGACCGATGGTGTCTTTTCAATGGA TGGGGTAGTCGCCAATTTACCAGCCATTTGTGATTTGGCTGATAAATATGATGCATTGGTGATGGTTGATGATTCTCATG CTGTTGGTTTTATGGGTGCCAATGGTCGTGGTACCCATGAATATCATAATGTAATGGGGCGTATTGATATTATTACCGGC ACCTTAGGTAAAGCTATGGGGGGCGCATCCGGTGGTTATACAGCGGGCAAAAAAGAAGTGATTGATTGGTTACGCCAACG CTCGCGTCCTTATCTTTTTTCAAACTCGCTTGCCCCTGCGATTGTTGCAGCTTCCATTGAGGTGCTCGACTTATTGGCTA AAAGTCACGCGCTGCGTGAAAAACTTTGGGAAAACTCTGCGCACTTTCGTCGCCGCATGACTGAAGCGGGTTTTACCATG GGTGGCAGTGACCATGCTATTATTCCTATTATGTTGGGGGATGCAAAAATAGCCGCCGAGTTTGCGGAAAGAGCCCTGTT GAAAAAAGTTTATGTGGTGGCTTTCTCGTTTCCTGTTGTACCAAAAGATCAGGCACGTATCCGTACGCAAATGTCTGCCG CACATACAACTAAGCAGCTTGATTATGCGATTGATGTCTTTATTGAAGTTGGTAAAGAGATGGGCTTAATTTAA
Upstream 100 bases:
>100_bases AATCATTGTAAATATATTTACAATGATTTGTCTCCCATACTCTCTGTTTTAATATAAAATAGTTAAATAATTTTCTGCTA AATCAATATCGTGGTGTGTC
Downstream 100 bases:
>100_bases TTGGAGAGCAAAATGAAAATAAAAGCGCTAGCAAAATTAAAACCAGAAGTGGGCATTTGGATGACCACAGTCGATAAGCC TGAGCCCGGGCATAATGATT
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSNKFYQQINQQIEQVKNDGLYKSERIITSAQQALVSIASGEQVLNFCANNYLGLANHPELIAAAKKGLDQQGFGMASVR FICGTQDKHKALEAKLSGFLGMEDTILYTSCFDANTGLFETILNADDAIISDALNHASIIDGVRLCKAKRFRYANNNMAE LEEQLIAAEKAGARNTLIVTDGVFSMDGVVANLPAICDLADKYDALVMVDDSHAVGFMGANGRGTHEYHNVMGRIDIITG TLGKAMGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIEVLDLLAKSHALREKLWENSAHFRRRMTEAGFTM GGSDHAIIPIMLGDAKIAAEFAERALLKKVYVVAFSFPVVPKDQARIRTQMSAAHTTKQLDYAIDVFIEVGKEMGLI
Sequences:
>Translated_397_residues MSNKFYQQINQQIEQVKNDGLYKSERIITSAQQALVSIASGEQVLNFCANNYLGLANHPELIAAAKKGLDQQGFGMASVR FICGTQDKHKALEAKLSGFLGMEDTILYTSCFDANTGLFETILNADDAIISDALNHASIIDGVRLCKAKRFRYANNNMAE LEEQLIAAEKAGARNTLIVTDGVFSMDGVVANLPAICDLADKYDALVMVDDSHAVGFMGANGRGTHEYHNVMGRIDIITG TLGKAMGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIEVLDLLAKSHALREKLWENSAHFRRRMTEAGFTM GGSDHAIIPIMLGDAKIAAEFAERALLKKVYVVAFSFPVVPKDQARIRTQMSAAHTTKQLDYAIDVFIEVGKEMGLI >Mature_396_residues SNKFYQQINQQIEQVKNDGLYKSERIITSAQQALVSIASGEQVLNFCANNYLGLANHPELIAAAKKGLDQQGFGMASVRF ICGTQDKHKALEAKLSGFLGMEDTILYTSCFDANTGLFETILNADDAIISDALNHASIIDGVRLCKAKRFRYANNNMAEL EEQLIAAEKAGARNTLIVTDGVFSMDGVVANLPAICDLADKYDALVMVDDSHAVGFMGANGRGTHEYHNVMGRIDIITGT LGKAMGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIEVLDLLAKSHALREKLWENSAHFRRRMTEAGFTMG GSDHAIIPIMLGDAKIAAEFAERALLKKVYVVAFSFPVVPKDQARIRTQMSAAHTTKQLDYAIDVFIEVGKEMGLI
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=389, Percent_Identity=51.413881748072, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI284448556, Length=416, Percent_Identity=48.5576923076923, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI4758668, Length=365, Percent_Identity=36.986301369863, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4502025, Length=406, Percent_Identity=31.0344827586207, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI40316939, Length=406, Percent_Identity=31.0344827586207, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI119220554, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI83977442, Length=366, Percent_Identity=33.3333333333333, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI83977440, Length=366, Percent_Identity=33.3333333333333, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI83977444, Length=403, Percent_Identity=31.2655086848635, Blast_Score=204, Evalue=9e-53, Organism=Homo sapiens, GI5454084, Length=261, Percent_Identity=29.1187739463602, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1790046, Length=397, Percent_Identity=69.7732997481108, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1786993, Length=352, Percent_Identity=33.2386363636364, Blast_Score=184, Evalue=9e-48, Organism=Caenorhabditis elegans, GI71994529, Length=399, Percent_Identity=54.8872180451128, Blast_Score=437, Evalue=1e-123, Organism=Caenorhabditis elegans, GI32566772, Length=369, Percent_Identity=31.9783197831978, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17560914, Length=359, Percent_Identity=32.033426183844, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17560912, Length=359, Percent_Identity=32.033426183844, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI71982617, Length=290, Percent_Identity=26.551724137931, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71982625, Length=290, Percent_Identity=26.551724137931, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6320438, Length=380, Percent_Identity=31.5789473684211, Blast_Score=203, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320267, Length=368, Percent_Identity=30.7065217391304, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6323954, Length=261, Percent_Identity=29.8850574712644, Blast_Score=109, Evalue=7e-25, Organism=Drosophila melanogaster, GI24662918, Length=390, Percent_Identity=57.1794871794872, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI17136286, Length=404, Percent_Identity=31.1881188118812, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI17137420, Length=380, Percent_Identity=28.4210526315789, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24653280, Length=372, Percent_Identity=24.7311827956989, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653276, Length=372, Percent_Identity=24.7311827956989, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653278, Length=372, Percent_Identity=24.7311827956989, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43263; Mature: 43132
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKFYQQINQQIEQVKNDGLYKSERIITSAQQALVSIASGEQVLNFCANNYLGLANHPE CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHH LIAAAKKGLDQQGFGMASVRFICGTQDKHKALEAKLSGFLGMEDTILYTSCFDANTGLFE HHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH TILNADDAIISDALNHASIIDGVRLCKAKRFRYANNNMAELEEQLIAAEKAGARNTLIVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE DGVFSMDGVVANLPAICDLADKYDALVMVDDSHAVGFMGANGRGTHEYHNVMGRIDIITG CCCCCCCCHHHCCCHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHEEEEC TLGKAMGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIEVLDLLAKSHALRE HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KLWENSAHFRRRMTEAGFTMGGSDHAIIPIMLGDAKIAAEFAERALLKKVYVVAFSFPVV HHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCC PKDQARIRTQMSAAHTTKQLDYAIDVFIEVGKEMGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNKFYQQINQQIEQVKNDGLYKSERIITSAQQALVSIASGEQVLNFCANNYLGLANHPE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHH LIAAAKKGLDQQGFGMASVRFICGTQDKHKALEAKLSGFLGMEDTILYTSCFDANTGLFE HHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH TILNADDAIISDALNHASIIDGVRLCKAKRFRYANNNMAELEEQLIAAEKAGARNTLIVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE DGVFSMDGVVANLPAICDLADKYDALVMVDDSHAVGFMGANGRGTHEYHNVMGRIDIITG CCCCCCCCHHHCCCHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHEEEEC TLGKAMGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIEVLDLLAKSHALRE HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH KLWENSAHFRRRMTEAGFTMGGSDHAIIPIMLGDAKIAAEFAERALLKKVYVVAFSFPVV HHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCC PKDQARIRTQMSAAHTTKQLDYAIDVFIEVGKEMGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]