| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945480
Identifier: 119945480
GI number: 119945480
Start: 2163161
End: 2164054
Strand: Direct
Name: 119945480
Synonym: Ping_1779
Alternate gene names: NA
Gene position: 2163161-2164054 (Clockwise)
Preceding gene: 119945479
Following gene: 119945481
Centisome position: 47.44
GC content: 47.54
Gene sequence:
>894_bases ATGGCAAAACACTCCCTCTATGCAGAAACCAGACCATTGAAAATCAAACACATTATTGCCAGCGTTAGCCTGTTGTTGTT AAGTGCCTGCAGCTCGACCGGACTTTTCCTGTTGAACTCTGCACTGAGGCTAAATTCCGAGCATAGCGTCAGCAAGGATG TCGCATTCGGTCAAGACGAGTGGCAGAAGTTAGATATCTACACGCCCAACAGGAGCGCACAACAAGCTAAGCCAGTATTG GTTTTTTTCTATGGCGGGAGTTGGGATTCCGGCTCAAAAGAAATGTATTTCTTTGTAGCCGATGCCTTTACTCGACTCGG CTATGTGGTCATTATTCCCGACTATGCAAAATATCCTGCAGCACGTTTCCCGGCGTTTATGGAAGATGGTGCAGCCGCCA TTGCTTGGACCAAACAAAACGTTGCCAACTATGGAGGGGATCCACAAAAAATATTTATCGCAGGACATTCTGCCGGTGCG CATCTCGGTGGCCTATTACTGACTGACGAACGTTACCTGAAGAAGCACGGGCTCAGTCCGCTGGACGTGCAGGGTTTCTC AGGTTTGGCTGGGCCATATAACTTTACCCCTACTCGTCCTAGCCTGATGGAAGTTTTTGGCCCACCTGAGAACTACCCTA ATATGCAGGTAATGAATTTTGTTAATGGCGATGAGCCACCGATGCTGCTCTTGCATGGCGCCAAAGATGACATAGTTGGT GTTCGTAACCAGGAGCTCTTGATCGAAAAATTATCCGCCGTGGGCAACCTGTCAACAGGGGTTTTGTATCCTGGACTAAC TCATACCAGTATTCTAACCAGCCTGACTTGGCCACTAAAAAAGAACAGTAGCACCCTCGACGATATGGATAAGTTCTTTA AAAGTTTACTCTGA
Upstream 100 bases:
>100_bases CATCACGTATTCAGCGGCTTGACCCGAAGCACTGCAATTTTAAGTCGTTGTTAACGAGCATTAATTAAAATTACTGCAGA AGATCATATTGACATGTAAA
Downstream 100 bases:
>100_bases CTTCTTTTATGCCTTTAGGCATCAGTCAGAGCGGTCGCCTTACTGGAGAATATACTGGGGCCGAGGGGCAAGTCTTTCAT TTTGCAGTTTGTTAATAATT
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein; Lipase; Carboxylesterase Family Protein; Esterase; Carboxylesterase; Hydrolase; Lipase Active Site; Esterase/Lipase/Thioesterase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Peptidase; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Para-Nitrobenzyl Esterase
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAKHSLYAETRPLKIKHIIASVSLLLLSACSSTGLFLLNSALRLNSEHSVSKDVAFGQDEWQKLDIYTPNRSAQQAKPVL VFFYGGSWDSGSKEMYFFVADAFTRLGYVVIIPDYAKYPAARFPAFMEDGAAAIAWTKQNVANYGGDPQKIFIAGHSAGA HLGGLLLTDERYLKKHGLSPLDVQGFSGLAGPYNFTPTRPSLMEVFGPPENYPNMQVMNFVNGDEPPMLLLHGAKDDIVG VRNQELLIEKLSAVGNLSTGVLYPGLTHTSILTSLTWPLKKNSSTLDDMDKFFKSLL
Sequences:
>Translated_297_residues MAKHSLYAETRPLKIKHIIASVSLLLLSACSSTGLFLLNSALRLNSEHSVSKDVAFGQDEWQKLDIYTPNRSAQQAKPVL VFFYGGSWDSGSKEMYFFVADAFTRLGYVVIIPDYAKYPAARFPAFMEDGAAAIAWTKQNVANYGGDPQKIFIAGHSAGA HLGGLLLTDERYLKKHGLSPLDVQGFSGLAGPYNFTPTRPSLMEVFGPPENYPNMQVMNFVNGDEPPMLLLHGAKDDIVG VRNQELLIEKLSAVGNLSTGVLYPGLTHTSILTSLTWPLKKNSSTLDDMDKFFKSLL >Mature_296_residues AKHSLYAETRPLKIKHIIASVSLLLLSACSSTGLFLLNSALRLNSEHSVSKDVAFGQDEWQKLDIYTPNRSAQQAKPVLV FFYGGSWDSGSKEMYFFVADAFTRLGYVVIIPDYAKYPAARFPAFMEDGAAAIAWTKQNVANYGGDPQKIFIAGHSAGAH LGGLLLTDERYLKKHGLSPLDVQGFSGLAGPYNFTPTRPSLMEVFGPPENYPNMQVMNFVNGDEPPMLLLHGAKDDIVGV RNQELLIEKLSAVGNLSTGVLYPGLTHTSILTSLTWPLKKNSSTLDDMDKFFKSLL
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI224465228, Length=144, Percent_Identity=32.6388888888889, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI192807282, Length=144, Percent_Identity=32.6388888888889, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32611; Mature: 32480
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHSLYAETRPLKIKHIIASVSLLLLSACSSTGLFLLNSALRLNSEHSVSKDVAFGQDE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCC WQKLDIYTPNRSAQQAKPVLVFFYGGSWDSGSKEMYFFVADAFTRLGYVVIIPDYAKYPA CEEEEEECCCCCHHCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHCCEEEEECCHHHCCH ARFPAFMEDGAAAIAWTKQNVANYGGDPQKIFIAGHSAGAHLGGLLLTDERYLKKHGLSP HHCCHHHHCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHCCCCC LDVQGFSGLAGPYNFTPTRPSLMEVFGPPENYPNMQVMNFVNGDEPPMLLLHGAKDDIVG CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEC VRNQELLIEKLSAVGNLSTGVLYPGLTHTSILTSLTWPLKKNSSTLDDMDKFFKSLL CCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure AKHSLYAETRPLKIKHIIASVSLLLLSACSSTGLFLLNSALRLNSEHSVSKDVAFGQDE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCC WQKLDIYTPNRSAQQAKPVLVFFYGGSWDSGSKEMYFFVADAFTRLGYVVIIPDYAKYPA CEEEEEECCCCCHHCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHCCEEEEECCHHHCCH ARFPAFMEDGAAAIAWTKQNVANYGGDPQKIFIAGHSAGAHLGGLLLTDERYLKKHGLSP HHCCHHHHCCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHCCCCC LDVQGFSGLAGPYNFTPTRPSLMEVFGPPENYPNMQVMNFVNGDEPPMLLLHGAKDDIVG CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEC VRNQELLIEKLSAVGNLSTGVLYPGLTHTSILTSLTWPLKKNSSTLDDMDKFFKSLL CCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA