| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945467
Identifier: 119945467
GI number: 119945467
Start: 2146978
End: 2147427
Strand: Direct
Name: 119945467
Synonym: Ping_1765
Alternate gene names: NA
Gene position: 2146978-2147427 (Clockwise)
Preceding gene: 119945466
Following gene: 119945468
Centisome position: 47.09
GC content: 34.44
Gene sequence:
>450_bases ATGAACAGTATTGATCTATTTGTAAAAAACTGGGGCAGTAAAAGCGTTATGGTGCCAATAAAGGATCATGATATTAAAGA GCTGGAATCAAAACTAAATATTTTTGTACCTGACTCATATAAATATTTGATATCTACATATGGTTTAGTTCACACTCCAA ATGTACTCACTAAAATTTGCGATTTAAGTTCTGAACTTTCTGAAGTACAAGATTTCTTAAGCCTGGAAGATATATTTTCT CTATCAAAGCTATATGAGATGACGGGTATGCCAAAGGGGCATATTTTGTTTGCGTCTGATTGTAAGGGCAATATGTTCTG TTTTAAACTGACGGATTGTGCGCGTCAGAAAACAGATGTACCCGTATGGTTTTTTGACCATGATTTGTGTACCGTTAATA AAGTATCTCAGTCTTTCATTGGATGGCTGGAGGAATTTAATGCACTTTAA
Upstream 100 bases:
>100_bases AATTAACAGTGATTTCTGGCTTCAACCTGCATCTAACCATCACAGAGAGGGTTAACGCCGGCCCTTCTAATAAGGGTTGA TTTTCTTGGAGTATTTCTAA
Downstream 100 bases:
>100_bases AACAGCCAAGAAACCCTTCAAAAGGGAAATATAGCGGGCTTCTCTTGGTGATCTTCGCCATTATTTTTTCGCCAGTTATT AATGTGTTTAGGCTGTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNSIDLFVKNWGSKSVMVPIKDHDIKELESKLNIFVPDSYKYLISTYGLVHTPNVLTKICDLSSELSEVQDFLSLEDIFS LSKLYEMTGMPKGHILFASDCKGNMFCFKLTDCARQKTDVPVWFFDHDLCTVNKVSQSFIGWLEEFNAL
Sequences:
>Translated_149_residues MNSIDLFVKNWGSKSVMVPIKDHDIKELESKLNIFVPDSYKYLISTYGLVHTPNVLTKICDLSSELSEVQDFLSLEDIFS LSKLYEMTGMPKGHILFASDCKGNMFCFKLTDCARQKTDVPVWFFDHDLCTVNKVSQSFIGWLEEFNAL >Mature_149_residues MNSIDLFVKNWGSKSVMVPIKDHDIKELESKLNIFVPDSYKYLISTYGLVHTPNVLTKICDLSSELSEVQDFLSLEDIFS LSKLYEMTGMPKGHILFASDCKGNMFCFKLTDCARQKTDVPVWFFDHDLCTVNKVSQSFIGWLEEFNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17076; Mature: 17076
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIDLFVKNWGSKSVMVPIKDHDIKELESKLNIFVPDSYKYLISTYGLVHTPNVLTKIC CCCCEEEEECCCCCEEEEEECCCCHHHHHHHCEEECCCCHHHHHHHCCCCCCCHHHHHHH DLSSELSEVQDFLSLEDIFSLSKLYEMTGMPKGHILFASDCKGNMFCFKLTDCARQKTDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECHHHHHCCCC PVWFFDHDLCTVNKVSQSFIGWLEEFNAL EEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSIDLFVKNWGSKSVMVPIKDHDIKELESKLNIFVPDSYKYLISTYGLVHTPNVLTKIC CCCCEEEEECCCCCEEEEEECCCCHHHHHHHCEEECCCCHHHHHHHCCCCCCCHHHHHHH DLSSELSEVQDFLSLEDIFSLSKLYEMTGMPKGHILFASDCKGNMFCFKLTDCARQKTDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECHHHHHCCCC PVWFFDHDLCTVNKVSQSFIGWLEEFNAL EEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA