| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is corA [H]
Identifier: 119945435
GI number: 119945435
Start: 2107207
End: 2108274
Strand: Direct
Name: corA [H]
Synonym: Ping_1732
Alternate gene names: 119945435
Gene position: 2107207-2108274 (Clockwise)
Preceding gene: 119945434
Following gene: 119945437
Centisome position: 46.21
GC content: 35.02
Gene sequence:
>1068_bases ATGATTGAATCTTTAACTGCTCTCTCAGAAAAATCAGGTTTACCACCCGGTTCACTGATTCATATTGGTGATGTCAGGGA AACGGTCACGCAAATGACTGTAATTGACTATTGCTCAGAAAATATTAAAGAGCATAAAATTCAATCACTAGATGAAATTT TAAAATATAAGGATAGTGATACGGTCACCTGGGTTATTATCGAAGGGTTAACAAATGTTGATATTGTAGAGCAGATCGGC ACCATGTTTGACATACATCAGCTGGTGCTCGAAGATATTTTAAATACGCATCAAAGGCCTAAATTTGAGGAGTATGATGA CCATCTTTTCATCGTACTTAAATGTTTATTGCCTGAAAATGATCAATTCTCGGTGACCTATGAGCAGATAAGCCTGTTAG TTTTGAAGAATTTTGTTTTCGCATTTAAAGAAAAAAAAGATGAGCTTTTTCATCCCATTATACAGCGCATTCGCACCAGC AGCGGTCGATTAAGAAACCTGCAGGCAGATTATCTTACCTACACTATTCTAGATACTATTGTTGACCAGAATTTTATTCT TATCGATTCATTGGATGAAGCCATTACTTCGCTGGAAGATATATTATTAACGTCTGACCCGGTAAACAATACACTTAATA CTATTCAAAAACTTAAAAGAGAAATAATAAGCATTAGAAAACATGTCTCGCCAGTGAGAGAATTAATCTCCGCAATGCTG CGCAGCGAATCGCCATTGATTGATGAAAAAACGCATATATATTTAAGGGATGTTTCTGATCATGCAATACGTGTATCAGA ATCAATAGAATCATACCGAGAGATATTAACTGGCTTATTAGATATTTACATATCGAGTATCAGCAATAAAATGAATGAAA CAATGAAATTCCTGACGGTTTTTGCTTCAATATTCATTCCGTTAACTTTTCTTGCGGGAATTTATGGAATGAACTTTGAA TATATGCCCGAGTTAAAGTGGAAATGGGCATACCCGGCTCTTTGGGCTGTTTTTATTATCTTGCCAATAATACTATTGAT CTATTTCAGAAGGAAAAAATGGTTATAA
Upstream 100 bases:
>100_bases TCGTTTAATCAAGGGTTAGCTAATATGCTCATAATAAAGACACTTAATGGTTTTTACTCAAATTTTGCTGCTGCTCATTG CTACTTTTTGGAGGGAATAA
Downstream 100 bases:
>100_bases CTCAATTCTGCAGTTTTTTTGTTACGGCTTTAGCATGAAATTTTACTTGCTTGAAATTCAAATAGTGACATGATTTTTAA AAAAAGAGCCTTTTTATCCA
Product: magnesium and cobalt transport protein CorA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MIESLTALSEKSGLPPGSLIHIGDVRETVTQMTVIDYCSENIKEHKIQSLDEILKYKDSDTVTWVIIEGLTNVDIVEQIG TMFDIHQLVLEDILNTHQRPKFEEYDDHLFIVLKCLLPENDQFSVTYEQISLLVLKNFVFAFKEKKDELFHPIIQRIRTS SGRLRNLQADYLTYTILDTIVDQNFILIDSLDEAITSLEDILLTSDPVNNTLNTIQKLKREIISIRKHVSPVRELISAML RSESPLIDEKTHIYLRDVSDHAIRVSESIESYREILTGLLDIYISSISNKMNETMKFLTVFASIFIPLTFLAGIYGMNFE YMPELKWKWAYPALWAVFIILPIILLIYFRRKKWL
Sequences:
>Translated_355_residues MIESLTALSEKSGLPPGSLIHIGDVRETVTQMTVIDYCSENIKEHKIQSLDEILKYKDSDTVTWVIIEGLTNVDIVEQIG TMFDIHQLVLEDILNTHQRPKFEEYDDHLFIVLKCLLPENDQFSVTYEQISLLVLKNFVFAFKEKKDELFHPIIQRIRTS SGRLRNLQADYLTYTILDTIVDQNFILIDSLDEAITSLEDILLTSDPVNNTLNTIQKLKREIISIRKHVSPVRELISAML RSESPLIDEKTHIYLRDVSDHAIRVSESIESYREILTGLLDIYISSISNKMNETMKFLTVFASIFIPLTFLAGIYGMNFE YMPELKWKWAYPALWAVFIILPIILLIYFRRKKWL >Mature_355_residues MIESLTALSEKSGLPPGSLIHIGDVRETVTQMTVIDYCSENIKEHKIQSLDEILKYKDSDTVTWVIIEGLTNVDIVEQIG TMFDIHQLVLEDILNTHQRPKFEEYDDHLFIVLKCLLPENDQFSVTYEQISLLVLKNFVFAFKEKKDELFHPIIQRIRTS SGRLRNLQADYLTYTILDTIVDQNFILIDSLDEAITSLEDILLTSDPVNNTLNTIQKLKREIISIRKHVSPVRELISAML RSESPLIDEKTHIYLRDVSDHAIRVSESIESYREILTGLLDIYISSISNKMNETMKFLTVFASIFIPLTFLAGIYGMNFE YMPELKWKWAYPALWAVFIILPIILLIYFRRKKWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=262, Percent_Identity=19.0839694656489, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI2367297, Length=278, Percent_Identity=25.1798561151079, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 41281; Mature: 41281
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESLTALSEKSGLPPGSLIHIGDVRETVTQMTVIDYCSENIKEHKIQSLDEILKYKDSD CCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVTWVIIEGLTNVDIVEQIGTMFDIHQLVLEDILNTHQRPKFEEYDDHLFIVLKCLLPEN CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC DQFSVTYEQISLLVLKNFVFAFKEKKDELFHPIIQRIRTSSGRLRNLQADYLTYTILDTI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH VDQNFILIDSLDEAITSLEDILLTSDPVNNTLNTIQKLKREIISIRKHVSPVRELISAML HCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSESPLIDEKTHIYLRDVSDHAIRVSESIESYREILTGLLDIYISSISNKMNETMKFLTV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FASIFIPLTFLAGIYGMNFEYMPELKWKWAYPALWAVFIILPIILLIYFRRKKWL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIESLTALSEKSGLPPGSLIHIGDVRETVTQMTVIDYCSENIKEHKIQSLDEILKYKDSD CCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVTWVIIEGLTNVDIVEQIGTMFDIHQLVLEDILNTHQRPKFEEYDDHLFIVLKCLLPEN CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC DQFSVTYEQISLLVLKNFVFAFKEKKDELFHPIIQRIRTSSGRLRNLQADYLTYTILDTI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH VDQNFILIDSLDEAITSLEDILLTSDPVNNTLNTIQKLKREIISIRKHVSPVRELISAML HCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSESPLIDEKTHIYLRDVSDHAIRVSESIESYREILTGLLDIYISSISNKMNETMKFLTV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FASIFIPLTFLAGIYGMNFEYMPELKWKWAYPALWAVFIILPIILLIYFRRKKWL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]