| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945351
Identifier: 119945351
GI number: 119945351
Start: 1995366
End: 1996478
Strand: Direct
Name: 119945351
Synonym: Ping_1637
Alternate gene names: NA
Gene position: 1995366-1996478 (Clockwise)
Preceding gene: 119945350
Following gene: 119945354
Centisome position: 43.76
GC content: 22.1
Gene sequence:
>1113_bases ATGAATAGTAAAAAATGGATTAAAATATTATTGATACTTTGTGTGTTGGGTGTCGGATTTATTAGTGGAGTTAATTATTT GGTTGACCCAATTGGTTTGAATAACAAAGTACTAATTAATAATATTAATACTAAAAAATATTCAAATACACTCATGACTA CAAGATTTAAAGCTAATATACTTGGAGATGGAAATTTTGATACTATAATGCTTGGAACATCAAGAATAGGTGTAATGAAT CCAAATATAGTAAATAAGCATTTGAATTCAAATGCTTTTAATCTTGAATATCCTGGTTCAAATACCGTTATTCAAAATAA ATTTTTTAAATATGCAAATCATTTTAATGATATAAAATACTTAATTTATGCAATTGATTTTATAGCATTCAATGAAAATA TAACTATCAAAAATAATTTTCATGATTTTTATAAATTAGAAAAAGAAATAGATAATTTTGATGAAATAGATGATTTTGAT TTATATTTTAATATTGAAACTTTTATTAAAAGTGTAAAAATTGTTATAAAAAATATTTTAAATATACAACAAACAGAAGT AATTTATTTATCTGAAAATGGTATGAGAGATTATAGGAATTATATTGAAGAAAATGAAAAAGGAACATTCAAATTAGATG AAAATATCAAAAAGAGTATTTCATACTCTTTTAGTAAAAACTCAATAACCTCTTATAAAAGCTACAAGTTTTCTTATGAA TATTTAGAATACTTTAAAAATACAATTGACTATTGTAATAGAAATAATATAAAATTTTTTGTATATATTCCTCCCATGTA TAGTGACGCTTTTGATGCAATAAATTCGGTTGGACAATTTGATGAATTTGAATTATTCAAAAAAGAACTTGTAAAAATTA CAGATTATATTGATTTTACTGGACACAATAAAATCAGTGAGAATAAAAATAACTACTGGGATTATGGTCATTTAAGAGTT GAAACAACAGAGCAAATAATGGCAAGAATTTTTAATAACAAATCAATTGATCTTCCAGAAAATTCTGGAGTTTTAGTAAC AAAAGAAAATATAGATGAACATTTAGAAAATCTGAGAAAACAAGTAAAAGATTATGATTTAGAAAAAATCTAA
Upstream 100 bases:
>100_bases TTATAAAACTTTAATCTTAACTTTAATCTACTTATTAGTTGGTCTTTTATCCTTAAATAAAGTAACAGAATTTTTATATT TTAATTTTTAAGGATAATTT
Downstream 100 bases:
>100_bases ACTAGAGCCTGTAAAATAAACTGTGTAAACTGTGTAAACTGAATATAAAAACCTCCAGTAATTCCCACGAAAAAAAATTG AATTCACAAGTAGAATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNSKKWIKILLILCVLGVGFISGVNYLVDPIGLNNKVLINNINTKKYSNTLMTTRFKANILGDGNFDTIMLGTSRIGVMN PNIVNKHLNSNAFNLEYPGSNTVIQNKFFKYANHFNDIKYLIYAIDFIAFNENITIKNNFHDFYKLEKEIDNFDEIDDFD LYFNIETFIKSVKIVIKNILNIQQTEVIYLSENGMRDYRNYIEENEKGTFKLDENIKKSISYSFSKNSITSYKSYKFSYE YLEYFKNTIDYCNRNNIKFFVYIPPMYSDAFDAINSVGQFDEFELFKKELVKITDYIDFTGHNKISENKNNYWDYGHLRV ETTEQIMARIFNNKSIDLPENSGVLVTKENIDEHLENLRKQVKDYDLEKI
Sequences:
>Translated_370_residues MNSKKWIKILLILCVLGVGFISGVNYLVDPIGLNNKVLINNINTKKYSNTLMTTRFKANILGDGNFDTIMLGTSRIGVMN PNIVNKHLNSNAFNLEYPGSNTVIQNKFFKYANHFNDIKYLIYAIDFIAFNENITIKNNFHDFYKLEKEIDNFDEIDDFD LYFNIETFIKSVKIVIKNILNIQQTEVIYLSENGMRDYRNYIEENEKGTFKLDENIKKSISYSFSKNSITSYKSYKFSYE YLEYFKNTIDYCNRNNIKFFVYIPPMYSDAFDAINSVGQFDEFELFKKELVKITDYIDFTGHNKISENKNNYWDYGHLRV ETTEQIMARIFNNKSIDLPENSGVLVTKENIDEHLENLRKQVKDYDLEKI >Mature_370_residues MNSKKWIKILLILCVLGVGFISGVNYLVDPIGLNNKVLINNINTKKYSNTLMTTRFKANILGDGNFDTIMLGTSRIGVMN PNIVNKHLNSNAFNLEYPGSNTVIQNKFFKYANHFNDIKYLIYAIDFIAFNENITIKNNFHDFYKLEKEIDNFDEIDDFD LYFNIETFIKSVKIVIKNILNIQQTEVIYLSENGMRDYRNYIEENEKGTFKLDENIKKSISYSFSKNSITSYKSYKFSYE YLEYFKNTIDYCNRNNIKFFVYIPPMYSDAFDAINSVGQFDEFELFKKELVKITDYIDFTGHNKISENKNNYWDYGHLRV ETTEQIMARIFNNKSIDLPENSGVLVTKENIDEHLENLRKQVKDYDLEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43575; Mature: 43575
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKKWIKILLILCVLGVGFISGVNYLVDPIGLNNKVLINNINTKKYSNTLMTTRFKANI CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCHHCCCEEEEEEEEEE LGDGNFDTIMLGTSRIGVMNPNIVNKHLNSNAFNLEYPGSNTVIQNKFFKYANHFNDIKY ECCCCCCEEEEECCEEECCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH LIYAIDFIAFNENITIKNNFHDFYKLEKEIDNFDEIDDFDLYFNIETFIKSVKIVIKNIL HHHHHHHEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH NIQQTEVIYLSENGMRDYRNYIEENEKGTFKLDENIKKSISYSFSKNSITSYKSYKFSYE CCCCEEEEEEECCCCHHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCCCCCHHHHEEHHH YLEYFKNTIDYCNRNNIKFFVYIPPMYSDAFDAINSVGQFDEFELFKKELVKITDYIDFT HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC GHNKISENKNNYWDYGHLRVETTEQIMARIFNNKSIDLPENSGVLVTKENIDEHLENLRK CCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHH QVKDYDLEKI HHHCCCCCCC >Mature Secondary Structure MNSKKWIKILLILCVLGVGFISGVNYLVDPIGLNNKVLINNINTKKYSNTLMTTRFKANI CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCHHCCCEEEEEEEEEE LGDGNFDTIMLGTSRIGVMNPNIVNKHLNSNAFNLEYPGSNTVIQNKFFKYANHFNDIKY ECCCCCCEEEEECCEEECCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH LIYAIDFIAFNENITIKNNFHDFYKLEKEIDNFDEIDDFDLYFNIETFIKSVKIVIKNIL HHHHHHHEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH NIQQTEVIYLSENGMRDYRNYIEENEKGTFKLDENIKKSISYSFSKNSITSYKSYKFSYE CCCCEEEEEEECCCCHHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCCCCCHHHHEEHHH YLEYFKNTIDYCNRNNIKFFVYIPPMYSDAFDAINSVGQFDEFELFKKELVKITDYIDFT HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC GHNKISENKNNYWDYGHLRVETTEQIMARIFNNKSIDLPENSGVLVTKENIDEHLENLRK CCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHH QVKDYDLEKI HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA