| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945347
Identifier: 119945347
GI number: 119945347
Start: 1990558
End: 1993251
Strand: Direct
Name: 119945347
Synonym: Ping_1633
Alternate gene names: NA
Gene position: 1990558-1993251 (Clockwise)
Preceding gene: 119945346
Following gene: 119945348
Centisome position: 43.66
GC content: 25.35
Gene sequence:
>2694_bases ATGTTTAAACATCAGTTAGATAGTGATTTTATTCTTAGAAAAAAGAAATCCATAAAAAAAGAATTATTATTAAAAAATAA TTTAATAAAAAAGAACATAGCTATATTAGGTGGTTCTACTATATCAGAAATAAAAAATATTTTAGAGTTATTTTTATTAG ACAATGGAATAAAAGTAAATTTTTATGAATCAGAATATAATAAATATTATGAAGATGCCCTATTTGGCAATGAGGATTTA GATAAATTTAATCCTGATATAGTTTATATACATACAACAAATCAGAATATTATTAAATATCCAGATCTAAAAGATAGTGA AGATGAAATCAAAATACTATTAAATAATGAAATTCAAAGATACAAATCAATATGGAGTTCATTATCTAAATTTGATTGTG CAATAATTCAAAATAATTTTGATTACACAATTGATAGAAGTTTAGGAAATTTAGATTGCTATGACATACATGGTAAAACA TATTTTATAAATCAATTAAATAATGAATTTGCAAAAGAAGCAAGAAAAATAAAATTCTTGTATATTAATGACATTAATTA TTTATCTTCATATATTGGATTAAAAAATTGGTTTGATAAATCACTATGGCATCAAGCGAAGTATGCTCTTAGTATGAATT CAATTCCAGAATTAGCATTTAATATTAGTAAAATTATGAATGCAATTTTTGGTAAAACAAAAAAATGTCTAGTTTTAGAC CTTGACAATACTTGTTGGGGTGGAGTGATTGGAGATGATGGGGTAAATGGTATTTATATAGGGACAGAGACAGCCATTGC TGAATCATATACATCTTTTCAAAAATATACTAAAGAATTAAAACAAAGAGGTATCACTTTAGCTGTATGTTCTAAAAATG ATTTTAAAAATGCTAAAGAAGGATTTGAACACCCTGAAAGTGTATTGAGATTTGATGACTTTACTTCATTTAAAGCTACT TGGGACCCTAAGCATGAGAATATTATGGATATAGCAAAAGAGATAAATATTGGAATTGATAGTTTAGTCTTTATAGATGA TAATGCAGTGGAAAGAGATATTGTATCATCTCAGATTTCAAGTGTGGCTGTTCCAGATGTGGGTAATGATGTAATACATT TTATAGACCACATAGATAGAAATGGATATTTTGAACCAATATCATTGTTAGCTGATGATATTAATAGAAATAAGTATTAT GAAGATAATAAAAAAAGAGTAAATGAAGAATCTATTTTTAAATCTTATGATGAGTTTTTGATTTCATTAGAAATGACAGC AGATATTAAATCTTTCTCTCCAATATACTTAAATAGAATAACACAACTTGCAAATAAAACTAATCAGTTTAATCTGACCA CAAAAAAATATACGGCGGGGGAGATAGAGAATATTGCGTCTAACAATGAATACATAAAAATTTATGGAAGATTAATAGAT AAATATGGAGATAATGGTTTAATAGCAATAACTATTGGAAGAATAAAAGACAATCAATGTCACATTGATTTATGGCTGAT GAGCTGTAGGGTTTTAAAAAGAGATATGGAATTTGCGATGCTTGATGAAGTTGTTAGGCAGTGTAAAGAACAAGATATAA CTGAGATAATAGGTTATTATTATAGAAGTGCCAAAAATAATATGGTTTCAGATTTATACGAAAAATTTGGATTTTTACTA AGTAATACAAATAATGAAGATACAGTTTGGAAGCTTAATATTTCAAATTATGAAAATGAAAATGAAAATGAAAATGAAAA TAAAAATAAATCTATAAGAGTAAATGTACGTATGAAAGATGAATTATTAAATATTATATACAAAAATGCACCCACTCAAG AGAAGAAAATCAAAGTTTTATTTAACGAGTTCCCTCAAATGGAACTAGACTTAGAATCGTTTTTATTAAATTATAAAAAA TTTATGCTTTTAGAAAGTATATCTGTTAAGGATATTGCTAATTCATATTTAGAGATGTTGGATCAAGTCTTTTTTTGTAG AAAAGAATTTTTATATAGTGGCCAGTATCACACTCAAAACCAAAATGAAGCATTTGAACATACTTATAATGATGAAAAGG TTATGACTAATTATATGTTAGCACTAGCTCTATCTCAGTTTTTATGGAAGCACCATTATAAAATATTTACCTTTTATAAG TCTATTGTACAAACTTTTGATAGTAAATCAAATATTTTGGAAGTTGGAAGTGGTCATGGTTTGTTCTTACTTGAAATTTT AAATCATAATGAAAATTTAAAAGATATTGATGTTGTTGATATAAGTAAATCATCTATAAGAATGACACAAAATATACTTA AATCTATGGAGAATGAATATATAGATAAGATAGTTTTTTATAACTACGATATCAACTTATATAAAACAAATAAAAAATAT AATTTTATAACTATGGGTGAAGTACTAGAACATGTGGATAATCCATTATCGATATTAAATAGTTTGTATAATCTCCTTAG TGAAGATGGAGAACTTTTTATAACTTCATGTGCAAATTGTCCTGCAATTGATCATGTATATCTTTTTAATAATGTAGATG AAATACGAGTATTAGCAAAAAAAGCTGGATTTAAAATAAAGTCTGAGATGGTTGCTCCATCAGTAGATAAAAACGATGAC TACTTAGAAAAAAATAAAGTTGATATATCTTATGCAGCTTTACTTACAAAATAA
Upstream 100 bases:
>100_bases TTTTTTCTACCTATTCAAGTTATGCACTTATTATTTGAATCTAAGAGTAATATTTAACTAGAATCTGTACCTTATTTAAA TAACAATTTAAAGGGCAATT
Downstream 100 bases:
>100_bases AAAGGAAAAATCATGGACATAAAAAACATATTACAAGAGTTATTTAGAGATATATTGGACATAGAAAATTTAGTTTTAGA AAATAAAACATCAGCAAATG
Product: HAD-superfamily phosphatase subfamily IIIC/FkbH domain-containing protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Modular Polyketide Synthase; FkbH-Like Protein; Amino Acid Adenylation Domain Protein; Methoxymalonate Biosynthesis Protein; Phosphatase IIIC; HAD Family Phosphatase; FkbH Domain Protein; HAD Family Phosphatase FbkH; Non-Ribosomal Peptide Synthetase; Modular Polyketide Synthase Type I PKS; HAD-Superfamily Phosphatase Subfamily Protein; Involved In Methoxymalonyl-ACP Biosynthesis; HAD-Superfamily Protein; Involved In Methoxymalonyl-ACP Biosynthesis-Like; FkbH Domain; Had-Superfamily Phosphatase Subfamily IIIcFkbh-Like Domain; FkbH-Protein; Polyketide Synthase Protein; HAD-Superfamily Phosphatase Subfamily IIIC; Fkbh Like Protein; Peptide Synthetase; Methoxymalonyl-ACP Biosynthesis Protein; Polyketide Synthase Subunit; Methyltransferase Domain-Containing Protein; Methoxymalonate Biosynthesis Protein HbmH
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MFKHQLDSDFILRKKKSIKKELLLKNNLIKKNIAILGGSTISEIKNILELFLLDNGIKVNFYESEYNKYYEDALFGNEDL DKFNPDIVYIHTTNQNIIKYPDLKDSEDEIKILLNNEIQRYKSIWSSLSKFDCAIIQNNFDYTIDRSLGNLDCYDIHGKT YFINQLNNEFAKEARKIKFLYINDINYLSSYIGLKNWFDKSLWHQAKYALSMNSIPELAFNISKIMNAIFGKTKKCLVLD LDNTCWGGVIGDDGVNGIYIGTETAIAESYTSFQKYTKELKQRGITLAVCSKNDFKNAKEGFEHPESVLRFDDFTSFKAT WDPKHENIMDIAKEINIGIDSLVFIDDNAVERDIVSSQISSVAVPDVGNDVIHFIDHIDRNGYFEPISLLADDINRNKYY EDNKKRVNEESIFKSYDEFLISLEMTADIKSFSPIYLNRITQLANKTNQFNLTTKKYTAGEIENIASNNEYIKIYGRLID KYGDNGLIAITIGRIKDNQCHIDLWLMSCRVLKRDMEFAMLDEVVRQCKEQDITEIIGYYYRSAKNNMVSDLYEKFGFLL SNTNNEDTVWKLNISNYENENENENENKNKSIRVNVRMKDELLNIIYKNAPTQEKKIKVLFNEFPQMELDLESFLLNYKK FMLLESISVKDIANSYLEMLDQVFFCRKEFLYSGQYHTQNQNEAFEHTYNDEKVMTNYMLALALSQFLWKHHYKIFTFYK SIVQTFDSKSNILEVGSGHGLFLLEILNHNENLKDIDVVDISKSSIRMTQNILKSMENEYIDKIVFYNYDINLYKTNKKY NFITMGEVLEHVDNPLSILNSLYNLLSEDGELFITSCANCPAIDHVYLFNNVDEIRVLAKKAGFKIKSEMVAPSVDKNDD YLEKNKVDISYAALLTK
Sequences:
>Translated_897_residues MFKHQLDSDFILRKKKSIKKELLLKNNLIKKNIAILGGSTISEIKNILELFLLDNGIKVNFYESEYNKYYEDALFGNEDL DKFNPDIVYIHTTNQNIIKYPDLKDSEDEIKILLNNEIQRYKSIWSSLSKFDCAIIQNNFDYTIDRSLGNLDCYDIHGKT YFINQLNNEFAKEARKIKFLYINDINYLSSYIGLKNWFDKSLWHQAKYALSMNSIPELAFNISKIMNAIFGKTKKCLVLD LDNTCWGGVIGDDGVNGIYIGTETAIAESYTSFQKYTKELKQRGITLAVCSKNDFKNAKEGFEHPESVLRFDDFTSFKAT WDPKHENIMDIAKEINIGIDSLVFIDDNAVERDIVSSQISSVAVPDVGNDVIHFIDHIDRNGYFEPISLLADDINRNKYY EDNKKRVNEESIFKSYDEFLISLEMTADIKSFSPIYLNRITQLANKTNQFNLTTKKYTAGEIENIASNNEYIKIYGRLID KYGDNGLIAITIGRIKDNQCHIDLWLMSCRVLKRDMEFAMLDEVVRQCKEQDITEIIGYYYRSAKNNMVSDLYEKFGFLL SNTNNEDTVWKLNISNYENENENENENKNKSIRVNVRMKDELLNIIYKNAPTQEKKIKVLFNEFPQMELDLESFLLNYKK FMLLESISVKDIANSYLEMLDQVFFCRKEFLYSGQYHTQNQNEAFEHTYNDEKVMTNYMLALALSQFLWKHHYKIFTFYK SIVQTFDSKSNILEVGSGHGLFLLEILNHNENLKDIDVVDISKSSIRMTQNILKSMENEYIDKIVFYNYDINLYKTNKKY NFITMGEVLEHVDNPLSILNSLYNLLSEDGELFITSCANCPAIDHVYLFNNVDEIRVLAKKAGFKIKSEMVAPSVDKNDD YLEKNKVDISYAALLTK >Mature_897_residues MFKHQLDSDFILRKKKSIKKELLLKNNLIKKNIAILGGSTISEIKNILELFLLDNGIKVNFYESEYNKYYEDALFGNEDL DKFNPDIVYIHTTNQNIIKYPDLKDSEDEIKILLNNEIQRYKSIWSSLSKFDCAIIQNNFDYTIDRSLGNLDCYDIHGKT YFINQLNNEFAKEARKIKFLYINDINYLSSYIGLKNWFDKSLWHQAKYALSMNSIPELAFNISKIMNAIFGKTKKCLVLD LDNTCWGGVIGDDGVNGIYIGTETAIAESYTSFQKYTKELKQRGITLAVCSKNDFKNAKEGFEHPESVLRFDDFTSFKAT WDPKHENIMDIAKEINIGIDSLVFIDDNAVERDIVSSQISSVAVPDVGNDVIHFIDHIDRNGYFEPISLLADDINRNKYY EDNKKRVNEESIFKSYDEFLISLEMTADIKSFSPIYLNRITQLANKTNQFNLTTKKYTAGEIENIASNNEYIKIYGRLID KYGDNGLIAITIGRIKDNQCHIDLWLMSCRVLKRDMEFAMLDEVVRQCKEQDITEIIGYYYRSAKNNMVSDLYEKFGFLL SNTNNEDTVWKLNISNYENENENENENKNKSIRVNVRMKDELLNIIYKNAPTQEKKIKVLFNEFPQMELDLESFLLNYKK FMLLESISVKDIANSYLEMLDQVFFCRKEFLYSGQYHTQNQNEAFEHTYNDEKVMTNYMLALALSQFLWKHHYKIFTFYK SIVQTFDSKSNILEVGSGHGLFLLEILNHNENLKDIDVVDISKSSIRMTQNILKSMENEYIDKIVFYNYDINLYKTNKKY NFITMGEVLEHVDNPLSILNSLYNLLSEDGELFITSCANCPAIDHVYLFNNVDEIRVLAKKAGFKIKSEMVAPSVDKNDD YLEKNKVDISYAALLTK
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104471; Mature: 104471
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHQLDSDFILRKKKSIKKELLLKNNLIKKNIAILGGSTISEIKNILELFLLDNGIKVN CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCHHHHHHHHHHHHHCCCCCEEE FYESEYNKYYEDALFGNEDLDKFNPDIVYIHTTNQNIIKYPDLKDSEDEIKILLNNEIQR EEHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECHHHHH YKSIWSSLSKFDCAIIQNNFDYTIDRSLGNLDCYDIHGKTYFINQLNNEFAKEARKIKFL HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCEEEECCCEEEHHHHHHHHHHHHHEEEEE YINDINYLSSYIGLKNWFDKSLWHQAKYALSMNSIPELAFNISKIMNAIFGKTKKCLVLD EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE LDNTCWGGVIGDDGVNGIYIGTETAIAESYTSFQKYTKELKQRGITLAVCSKNDFKNAKE CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH GFEHPESVLRFDDFTSFKATWDPKHENIMDIAKEINIGIDSLVFIDDNAVERDIVSSQIS HHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH SVAVPDVGNDVIHFIDHIDRNGYFEPISLLADDINRNKYYEDNKKRVNEESIFKSYDEFL HEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHH ISLEMTADIKSFSPIYLNRITQLANKTNQFNLTTKKYTAGEIENIASNNEYIKIYGRLID EEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCEEEEHHHHHH KYGDNGLIAITIGRIKDNQCHIDLWLMSCRVLKRDMEFAMLDEVVRQCKEQDITEIIGYY HCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YRSAKNNMVSDLYEKFGFLLSNTNNEDTVWKLNISNYENENENENENKNKSIRVNVRMKD HHHHCCHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEHH ELLNIIYKNAPTQEKKIKVLFNEFPQMELDLESFLLNYKKFMLLESISVKDIANSYLEML HHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVFFCRKEFLYSGQYHTQNQNEAFEHTYNDEKVMTNYMLALALSQFLWKHHYKIFTFYK HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVQTFDSKSNILEVGSGHGLFLLEILNHNENLKDIDVVDISKSSIRMTQNILKSMENEY HHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH IDKIVFYNYDINLYKTNKKYNFITMGEVLEHVDNPLSILNSLYNLLSEDGELFITSCANC HCEEEEEEEEEEEEECCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCC PAIDHVYLFNNVDEIRVLAKKAGFKIKSEMVAPSVDKNDDYLEKNKVDISYAALLTK CCCCEEEEECCHHHHHHHHHHCCCEEHHHHCCCCCCCCCCHHHCCCCCEEHHEEECC >Mature Secondary Structure MFKHQLDSDFILRKKKSIKKELLLKNNLIKKNIAILGGSTISEIKNILELFLLDNGIKVN CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCHHHHHHHHHHHHHCCCCCEEE FYESEYNKYYEDALFGNEDLDKFNPDIVYIHTTNQNIIKYPDLKDSEDEIKILLNNEIQR EEHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECHHHHH YKSIWSSLSKFDCAIIQNNFDYTIDRSLGNLDCYDIHGKTYFINQLNNEFAKEARKIKFL HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCEEEECCCEEEHHHHHHHHHHHHHEEEEE YINDINYLSSYIGLKNWFDKSLWHQAKYALSMNSIPELAFNISKIMNAIFGKTKKCLVLD EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE LDNTCWGGVIGDDGVNGIYIGTETAIAESYTSFQKYTKELKQRGITLAVCSKNDFKNAKE CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH GFEHPESVLRFDDFTSFKATWDPKHENIMDIAKEINIGIDSLVFIDDNAVERDIVSSQIS HHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH SVAVPDVGNDVIHFIDHIDRNGYFEPISLLADDINRNKYYEDNKKRVNEESIFKSYDEFL HEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHH ISLEMTADIKSFSPIYLNRITQLANKTNQFNLTTKKYTAGEIENIASNNEYIKIYGRLID EEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCEEEEHHHHHH KYGDNGLIAITIGRIKDNQCHIDLWLMSCRVLKRDMEFAMLDEVVRQCKEQDITEIIGYY HCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YRSAKNNMVSDLYEKFGFLLSNTNNEDTVWKLNISNYENENENENENKNKSIRVNVRMKD HHHHCCHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEHH ELLNIIYKNAPTQEKKIKVLFNEFPQMELDLESFLLNYKKFMLLESISVKDIANSYLEML HHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVFFCRKEFLYSGQYHTQNQNEAFEHTYNDEKVMTNYMLALALSQFLWKHHYKIFTFYK HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVQTFDSKSNILEVGSGHGLFLLEILNHNENLKDIDVVDISKSSIRMTQNILKSMENEY HHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH IDKIVFYNYDINLYKTNKKYNFITMGEVLEHVDNPLSILNSLYNLLSEDGELFITSCANC HCEEEEEEEEEEEEECCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCC PAIDHVYLFNNVDEIRVLAKKAGFKIKSEMVAPSVDKNDDYLEKNKVDISYAALLTK CCCCEEEEECCHHHHHHHHHHCCCEEHHHHCCCCCCCCCCHHHCCCCCEEHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA