| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is flp [H]
Identifier: 119945337
GI number: 119945337
Start: 1973864
End: 1975144
Strand: Direct
Name: flp [H]
Synonym: Ping_1621
Alternate gene names: 119945337
Gene position: 1973864-1975144 (Clockwise)
Preceding gene: 119945335
Following gene: 119945338
Centisome position: 43.29
GC content: 39.58
Gene sequence:
>1281_bases ATGGCAGGCTTATATTTTGATAAACTGTTTTTTTTTGCAAAATCACCATTAGGGATGTTTTTGAAACATATAATAGTTTT TTTTTTGACACTGCTTTTTTTAAGTACAATAGTACCTGTCTCCGCTAAATCAACCCCTCCTTCAAAAATAGAAATTGAGT TCAATAAGCTGTTTAAGCGGGCTATGCGTGTGAATCACATTCCCGGTGCCACTTATGCCATTGTGCGAGGCGATCGCGTG TCGACAATTAAAGCCTATGGAGTACGTGGACAAAAGAATAACAAAGCGATCGATAAAGATACCTCTTTTAGATTGGCCTC GGTATCAAAAACATTTTCCGCTGAGTTGGCAGCGCTGATGATCGAAAAAAAATCATTTGCTTGGAACGATTCTATTGTCG ATTATATTCCTGAATTTAAGCTTAAGCAGGCAGGTCAAGCCGAAGCTATTACCATCAAGCATGTGCTAAGCCACAGCAGC GGATTAATGCCCAATGCCTTTGATGGTTATTTAAAAGGTGGTTTTCAATTTAGCCATATTATATCAAAATTTGAAGCTTT AGAGCCTTATTGTTCACCTGGGGCATGTTACGGTTATCAGAATGTACTGTTTAGTTTTATAGCCGAAGTGTTTAAACGCA GTACAGGTAAAGCATACGCTGAATTGATGCAACAGATGATTTTTTCCCCCTTAGCAATGAACAATGCCAGTGTCGGTTTT GATGCTTATAAAAATACCACTAATAAAGCCTACCCTCATGTTAAAGTCAGCCGTAACGGGCCTTGGCATCAAGTAAAAAT AAAACCAGATTTCTACAAAGTCGAGGCTGCAGCTGGTATCAATGCCAGCATTACGGATATGAGTAAATGGTTGCTTGCGC AGTTGGGGCATACGCCAGAGGTAATTTCGGCGCATTTATTAGAGACAGTAAGGGAGCCTGTCGTTAGCACAGAGAAAGAT GTAAAAAGTCGCACCTGGAAGGGCATCATTGATGATGCCCATTATGGTATTGGCTGGCGTGTTTACCAATATAATGAGGA CATATTATATTTTCACAGTGGCTGGGTTGAAGGTTTTCGAGCGGTAATTGCCTATTCAAAAGATAAGCAGATAGGGTTAG TTATATTGGCTAATGCTGAATCACGCAGTATTGATAAATTAACGGTGGATTTCTGGCGTTTGTTACTTAAAGAGCCTTCG GTTAAGGAAACCCTATTAGTGAAGGATATTAAACCGGTTAAGGCAAACCGATCAGTGAAGGATATTAAATCGTCTTTCTA A
Upstream 100 bases:
>100_bases TAATAATTGTTTCATAATTAATACAATAAGTTGTGTCATTTAAGTTCTTTTATAGATAGATTTTGGTACCCAGATGCTGT CTTTATTGGGTTATAGGGTG
Downstream 100 bases:
>100_bases TAAAATACTGATGGCAGTCAACGCTTCAGGCTATCTCACCAACTAGTTATTTATTATATTTTTTTAAGATAGATCGGCTT ATAAATATTTTATATGAAAT
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MAGLYFDKLFFFAKSPLGMFLKHIIVFFLTLLFLSTIVPVSAKSTPPSKIEIEFNKLFKRAMRVNHIPGATYAIVRGDRV STIKAYGVRGQKNNKAIDKDTSFRLASVSKTFSAELAALMIEKKSFAWNDSIVDYIPEFKLKQAGQAEAITIKHVLSHSS GLMPNAFDGYLKGGFQFSHIISKFEALEPYCSPGACYGYQNVLFSFIAEVFKRSTGKAYAELMQQMIFSPLAMNNASVGF DAYKNTTNKAYPHVKVSRNGPWHQVKIKPDFYKVEAAAGINASITDMSKWLLAQLGHTPEVISAHLLETVREPVVSTEKD VKSRTWKGIIDDAHYGIGWRVYQYNEDILYFHSGWVEGFRAVIAYSKDKQIGLVILANAESRSIDKLTVDFWRLLLKEPS VKETLLVKDIKPVKANRSVKDIKSSF
Sequences:
>Translated_426_residues MAGLYFDKLFFFAKSPLGMFLKHIIVFFLTLLFLSTIVPVSAKSTPPSKIEIEFNKLFKRAMRVNHIPGATYAIVRGDRV STIKAYGVRGQKNNKAIDKDTSFRLASVSKTFSAELAALMIEKKSFAWNDSIVDYIPEFKLKQAGQAEAITIKHVLSHSS GLMPNAFDGYLKGGFQFSHIISKFEALEPYCSPGACYGYQNVLFSFIAEVFKRSTGKAYAELMQQMIFSPLAMNNASVGF DAYKNTTNKAYPHVKVSRNGPWHQVKIKPDFYKVEAAAGINASITDMSKWLLAQLGHTPEVISAHLLETVREPVVSTEKD VKSRTWKGIIDDAHYGIGWRVYQYNEDILYFHSGWVEGFRAVIAYSKDKQIGLVILANAESRSIDKLTVDFWRLLLKEPS VKETLLVKDIKPVKANRSVKDIKSSF >Mature_425_residues AGLYFDKLFFFAKSPLGMFLKHIIVFFLTLLFLSTIVPVSAKSTPPSKIEIEFNKLFKRAMRVNHIPGATYAIVRGDRVS TIKAYGVRGQKNNKAIDKDTSFRLASVSKTFSAELAALMIEKKSFAWNDSIVDYIPEFKLKQAGQAEAITIKHVLSHSSG LMPNAFDGYLKGGFQFSHIISKFEALEPYCSPGACYGYQNVLFSFIAEVFKRSTGKAYAELMQQMIFSPLAMNNASVGFD AYKNTTNKAYPHVKVSRNGPWHQVKIKPDFYKVEAAAGINASITDMSKWLLAQLGHTPEVISAHLLETVREPVVSTEKDV KSRTWKGIIDDAHYGIGWRVYQYNEDILYFHSGWVEGFRAVIAYSKDKQIGLVILANAESRSIDKLTVDFWRLLLKEPSV KETLLVKDIKPVKANRSVKDIKSSF
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790593, Length=383, Percent_Identity=21.9321148825065, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 47932; Mature: 47801
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLYFDKLFFFAKSPLGMFLKHIIVFFLTLLFLSTIVPVSAKSTPPSKIEIEFNKLFKR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHH AMRVNHIPGATYAIVRGDRVSTIKAYGVRGQKNNKAIDKDTSFRLASVSKTFSAELAALM HHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH IEKKSFAWNDSIVDYIPEFKLKQAGQAEAITIKHVLSHSSGLMPNAFDGYLKGGFQFSHI HHHCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHH ISKFEALEPYCSPGACYGYQNVLFSFIAEVFKRSTGKAYAELMQQMIFSPLAMNNASVGF HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCC DAYKNTTNKAYPHVKVSRNGPWHQVKIKPDFYKVEAAAGINASITDMSKWLLAQLGHTPE HHHCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH VISAHLLETVREPVVSTEKDVKSRTWKGIIDDAHYGIGWRVYQYNEDILYFHSGWVEGFR HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCHHHHHH AVIAYSKDKQIGLVILANAESRSIDKLTVDFWRLLLKEPSVKETLLVKDIKPVKANRSVK HHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH DIKSSF HHHHCC >Mature Secondary Structure AGLYFDKLFFFAKSPLGMFLKHIIVFFLTLLFLSTIVPVSAKSTPPSKIEIEFNKLFKR CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHH AMRVNHIPGATYAIVRGDRVSTIKAYGVRGQKNNKAIDKDTSFRLASVSKTFSAELAALM HHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH IEKKSFAWNDSIVDYIPEFKLKQAGQAEAITIKHVLSHSSGLMPNAFDGYLKGGFQFSHI HHHCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHH ISKFEALEPYCSPGACYGYQNVLFSFIAEVFKRSTGKAYAELMQQMIFSPLAMNNASVGF HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCC DAYKNTTNKAYPHVKVSRNGPWHQVKIKPDFYKVEAAAGINASITDMSKWLLAQLGHTPE HHHCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH VISAHLLETVREPVVSTEKDVKSRTWKGIIDDAHYGIGWRVYQYNEDILYFHSGWVEGFR HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCHHHHHH AVIAYSKDKQIGLVILANAESRSIDKLTVDFWRLLLKEPSVKETLLVKDIKPVKANRSVK HHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH DIKSSF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA