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The map label for this gene is 119945276

Identifier: 119945276

GI number: 119945276

Start: 1899362

End: 1900912

Strand: Direct

Name: 119945276

Synonym: Ping_1551

Alternate gene names: NA

Gene position: 1899362-1900912 (Clockwise)

Preceding gene: 119945275

Following gene: 119945277

Centisome position: 41.66

GC content: 40.94

Gene sequence:

>1551_bases
ATGACGGCAAAACACCTCAGGCTTATATTGGGTGATCAGCTCAACCCTATGCACACTTGGTTTGAACATATCGACGCTGA
TGTTGTTTATGTCATCGCGGAGCTTCACCAAGAGGCAAACTATACCAAGCACCATGTGCAAAAAATAAGTGCATTTTTTG
CTGCCATGGCTAATTTTGCCCAAGACCTTGAAAGTAAAGGCCATCGGGTTTGTTACTTAACCTTAGATGACAGTGCAGCA
TATCAAGATCTTCCACAGCTGATAAAAGCATTAGTTGCACGTTATGCTTGTCAAAGCTTTACCTTTCAACGGCCTGACGA
ATATCGCTTACGAGCTCAATTAGCAGGCATGTCAGCGCAGTTAGCTTTACCTGTGGTTGAAGTCGACAGTGAACATTTTT
TACTGCCTTTTGATGAGTTACCTAGTCATTTTAAAGCGGCAACGCACGTAAGAATGGAGAATTTTTATCGCTTGATGCGT
AAGCGTTTTTCTATTTTGATGACGGGCTTAAAACCGGCAGGTGGTGCATGGAACTTTGACGCGAATAATCGTCAATCATT
TAAGCAAGCTGATCTCAAACTTATCCCCAAACCTTTGGTATTTGACAACTCAGCAGACGAGTATTTACAGCGTATAAAAC
AGCATAATATTAATACTATCGGGCATGAGTCGGCCAATGTTGCTTATCCCATTAATCGGCAACAATCCTTAGTATTACTG
GATTATTTTTGTCAACATCAGCTGGCTAATTTTGGCAATTTTCAGGATGCAATGACTGTCGCGTCGCCCTACGCTTGGAG
TTTATATCACTCGCGTTTAAGCTTTTCACTTAACTGTAAAATGCTCAGCCCAATGGAGGTAATTGAAACTGCGCTTATCG
CTTATCAAGATTCTGCGGGTAAGATCACATTGGCGCAAATTGAAGGTTTTGTTCGGCAAATTCTAGGCTGGCGAGAATAT
GTCAGAGGTATGTATTGGGTTAATATGCCGAATTACGCAGAGCAAAATTTTTTAGGTGCTAAGCGCAACTTGCCTGCTTT
TTTCTGGAATGCTGACACTAAAATGCAGTGTTTAAAAAGTGCGATATCACAATCACTGGAGCATGCTTATGCCCACCATA
TTCAACGGTTAATGATCACAGGAAATTTTTCTTTATTAGCCGGTATTGCGCCTAGCCAAGTTGATGACTGGTATTTAGGC
ATCTACATAGACGCGATTGAATGGGTAGAACTACCCAATACTCGCAGCATGGCGCTTTTTGCTGACGGTGGTTGGATTGC
AACAAAACCTTATGCAGCAAGTGGTAATTATGTGAATAAAATGAGTGATTATTGTAAAAACTGTCATTATAAAGTGAAAG
AAAAAGTCAGCTCAAATGCTTGCCCGTTAAATAGTTTATATTGGAACTTTATCGACCAAAACTATGACAAGTTTGCCTCA
AACCATCGCATGAGCTTCCCTATCCGTAACTGGGATAAAGTTGACCCGGCGCAAAAAATTGCCATCAGAGAAAAAGCGGC
CGAGTTATTAAATGATTTAGACAAGTTATAG

Upstream 100 bases:

>100_bases
AAAAGAGCTAAACTCAAACTCAAACTCAAATTTGAACTTAAACTAAACAAAGCGCTAAATCTGGCGCTAGCCAGCGTTCA
AATCAAAGTAAGGTAAATTC

Downstream 100 bases:

>100_bases
ATTTACTCCGTAGTTTTGTAGCGTAAATTAAAAGCCTTTTTCCACAACACCGTTTGGCGGTTTTTTTGTAGGTTGGACTT
TAGTCTGTCAACCGTTAAAC

Product: deoxyribodipyrimidine photolyase-related protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Photolyase Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photolyase Related Protein; Deoxyribodipyrimidine Photo-Lyase; A Deoxyribodipyrimidine Photolyase-Like Protein; Cryptochrome/Photolyase-Related; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MTAKHLRLILGDQLNPMHTWFEHIDADVVYVIAELHQEANYTKHHVQKISAFFAAMANFAQDLESKGHRVCYLTLDDSAA
YQDLPQLIKALVARYACQSFTFQRPDEYRLRAQLAGMSAQLALPVVEVDSEHFLLPFDELPSHFKAATHVRMENFYRLMR
KRFSILMTGLKPAGGAWNFDANNRQSFKQADLKLIPKPLVFDNSADEYLQRIKQHNINTIGHESANVAYPINRQQSLVLL
DYFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPMEVIETALIAYQDSAGKITLAQIEGFVRQILGWREY
VRGMYWVNMPNYAEQNFLGAKRNLPAFFWNADTKMQCLKSAISQSLEHAYAHHIQRLMITGNFSLLAGIAPSQVDDWYLG
IYIDAIEWVELPNTRSMALFADGGWIATKPYAASGNYVNKMSDYCKNCHYKVKEKVSSNACPLNSLYWNFIDQNYDKFAS
NHRMSFPIRNWDKVDPAQKIAIREKAAELLNDLDKL

Sequences:

>Translated_516_residues
MTAKHLRLILGDQLNPMHTWFEHIDADVVYVIAELHQEANYTKHHVQKISAFFAAMANFAQDLESKGHRVCYLTLDDSAA
YQDLPQLIKALVARYACQSFTFQRPDEYRLRAQLAGMSAQLALPVVEVDSEHFLLPFDELPSHFKAATHVRMENFYRLMR
KRFSILMTGLKPAGGAWNFDANNRQSFKQADLKLIPKPLVFDNSADEYLQRIKQHNINTIGHESANVAYPINRQQSLVLL
DYFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPMEVIETALIAYQDSAGKITLAQIEGFVRQILGWREY
VRGMYWVNMPNYAEQNFLGAKRNLPAFFWNADTKMQCLKSAISQSLEHAYAHHIQRLMITGNFSLLAGIAPSQVDDWYLG
IYIDAIEWVELPNTRSMALFADGGWIATKPYAASGNYVNKMSDYCKNCHYKVKEKVSSNACPLNSLYWNFIDQNYDKFAS
NHRMSFPIRNWDKVDPAQKIAIREKAAELLNDLDKL
>Mature_515_residues
TAKHLRLILGDQLNPMHTWFEHIDADVVYVIAELHQEANYTKHHVQKISAFFAAMANFAQDLESKGHRVCYLTLDDSAAY
QDLPQLIKALVARYACQSFTFQRPDEYRLRAQLAGMSAQLALPVVEVDSEHFLLPFDELPSHFKAATHVRMENFYRLMRK
RFSILMTGLKPAGGAWNFDANNRQSFKQADLKLIPKPLVFDNSADEYLQRIKQHNINTIGHESANVAYPINRQQSLVLLD
YFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPMEVIETALIAYQDSAGKITLAQIEGFVRQILGWREYV
RGMYWVNMPNYAEQNFLGAKRNLPAFFWNADTKMQCLKSAISQSLEHAYAHHIQRLMITGNFSLLAGIAPSQVDDWYLGI
YIDAIEWVELPNTRSMALFADGGWIATKPYAASGNYVNKMSDYCKNCHYKVKEKVSSNACPLNSLYWNFIDQNYDKFASN
HRMSFPIRNWDKVDPAQKIAIREKAAELLNDLDKL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59249; Mature: 59118

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKHLRLILGDQLNPMHTWFEHIDADVVYVIAELHQEANYTKHHVQKISAFFAAMANFA
CCCHHEEHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QDLESKGHRVCYLTLDDSAAYQDLPQLIKALVARYACQSFTFQRPDEYRLRAQLAGMSAQ
HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE
LALPVVEVDSEHFLLPFDELPSHFKAATHVRMENFYRLMRKRFSILMTGLKPAGGAWNFD
EEEEEEEECCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ANNRQSFKQADLKLIPKPLVFDNSADEYLQRIKQHNINTIGHESANVAYPINRQQSLVLL
CCCCHHHHHCCHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHH
DYFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPMEVIETALIAYQDSAG
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHEECCCC
KITLAQIEGFVRQILGWREYVRGMYWVNMPNYAEQNFLGAKRNLPAFFWNADTKMQCLKS
CEEHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHH
AISQSLEHAYAHHIQRLMITGNFSLLAGIAPSQVDDWYLGIYIDAIEWVELPNTRSMALF
HHHHHHHHHHHHHHHHHHEECCHHHEECCCCCCCCCEEEEEEEEEEHHEECCCCCCEEEE
ADGGWIATKPYAASGNYVNKMSDYCKNCHYKVKEKVSSNACPLNSLYWNFIDQNYDKFAS
ECCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHC
NHRMSFPIRNWDKVDPAQKIAIREKAAELLNDLDKL
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAKHLRLILGDQLNPMHTWFEHIDADVVYVIAELHQEANYTKHHVQKISAFFAAMANFA
CCHHEEHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QDLESKGHRVCYLTLDDSAAYQDLPQLIKALVARYACQSFTFQRPDEYRLRAQLAGMSAQ
HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE
LALPVVEVDSEHFLLPFDELPSHFKAATHVRMENFYRLMRKRFSILMTGLKPAGGAWNFD
EEEEEEEECCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ANNRQSFKQADLKLIPKPLVFDNSADEYLQRIKQHNINTIGHESANVAYPINRQQSLVLL
CCCCHHHHHCCHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHH
DYFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPMEVIETALIAYQDSAG
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHEECCCC
KITLAQIEGFVRQILGWREYVRGMYWVNMPNYAEQNFLGAKRNLPAFFWNADTKMQCLKS
CEEHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHH
AISQSLEHAYAHHIQRLMITGNFSLLAGIAPSQVDDWYLGIYIDAIEWVELPNTRSMALF
HHHHHHHHHHHHHHHHHHEECCHHHEECCCCCCCCCEEEEEEEEEEHHEECCCCCCEEEE
ADGGWIATKPYAASGNYVNKMSDYCKNCHYKVKEKVSSNACPLNSLYWNFIDQNYDKFAS
ECCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHC
NHRMSFPIRNWDKVDPAQKIAIREKAAELLNDLDKL
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA