| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945253
Identifier: 119945253
GI number: 119945253
Start: 1870325
End: 1871560
Strand: Reverse
Name: 119945253
Synonym: Ping_1523
Alternate gene names: NA
Gene position: 1871560-1870325 (Counterclockwise)
Preceding gene: 119945254
Following gene: 119945249
Centisome position: 41.05
GC content: 44.26
Gene sequence:
>1236_bases ATGATTCAAGAATATTTACGTTTTATAAGGCACAGCTGGCCAATACTCATTTTTGGAATGATGACAGTTTTCATGGGGAA TTTTGGTCAGTCGTTTTTTATCAGCTGGTTTGGCAGCAGCTTTCAAGAAAGTCTTGGTCTATCAGCCACCAGCTATGGAA CTGCCTACTCGTCGGCCACACTTGCAAGTGGCCTGCTTCTTATGTGGATTGGTGGGAGCATTGACAAGGTCTCGTTAGAA AAGTTTGTCATATTCTGCACCATTGGACTTTTCCTGGCGGCGCTCACTCTCTGGCAGGCCAATAATCTAACTATGCTTGT AATCGGGATTTTTCTTCTGCGTTTTTTTGGTCAGGGACTGTTTCCACACACCGCCATAACCACAATGATGAAAACGTTTT CTTTGAATCGAGGGAAAGGTCTGAGTGTGGCAACCACTGGCGTCCCCTTAGGTGAAATCATACTGCCTTCTGTTGCCGTA TTTCTTATTGCACAATTCGGGTGGCAACAAAGCTGGATGGTGATCGCACTGTCAGTCCCCCTACTTTATCTTCCTATGGC ACTTTTTCTTATTAAACGCGGGAAAAATAAAAAATATGCTGAGCATAATCCCACTGTCGATAATGAAACTGCTAAACCAC TCAATGAGGATGGCTCCAGAAGAACACTACTTTCTGATTTTCGTTTTTGGCTGGCACTACCAACCGTCCTTTCTACACCT TTCATCATGACAGGCATATTTATTCATCAGGGATTTTTTCTACCCGAAATGGGCTGGACACCCATGCTTTTTGCCAATTG CTTTGTCTTTTATGGGATTACCCATTGGCTTTCATCAATGTATGCAGGCGCATTGGTGGACCGATTCAGCGGAAGACAAC TGTTAAAATATTACCCCATTCCTATGCTCATGGCTTTGCTGCTGGCATCACAACTGACTGGCGACTGGGTTGCTTACGTG CTGCTTATTTCACTCGGCACTGCCATCGGCTCCGGCGGTCCAATCATTAATGCGCTTTGGGCTGAAGTGTATGGCACTAA GCATCTTGGGAGAATCCGAGCACTTATGGCATCTCTTGCTGTAATATCGACCTCTATTTCTCCTATCTTATTTGGCTATC TTATTGACAGCGGCATCACCGGCCCTGAGCTTTTCTTCTGGCTCTTTATGTACGTATTACTGGCCATGTTTTTCGCTTTC TTTTCATACTCTAATAAGAAGACACTAAAGATTTGA
Upstream 100 bases:
>100_bases AAAAAGCTTCACATCATAGTTATTCGCATTTACCTTCTATTGTTGACAAACCACCAAAAAAAGTGAATTCTGTGCGTTTT CAAGGGAGCTTAGATAAGAA
Downstream 100 bases:
>100_bases TTATACCGCCAGCAAATAGACATCCACCTTGTTAGTCTGTACGAATTTGCGGCCTAGGAAAGTAATCTATCAAATATCTT AATTAGCTCAACACCACCTG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Permease Protein
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MIQEYLRFIRHSWPILIFGMMTVFMGNFGQSFFISWFGSSFQESLGLSATSYGTAYSSATLASGLLLMWIGGSIDKVSLE KFVIFCTIGLFLAALTLWQANNLTMLVIGIFLLRFFGQGLFPHTAITTMMKTFSLNRGKGLSVATTGVPLGEIILPSVAV FLIAQFGWQQSWMVIALSVPLLYLPMALFLIKRGKNKKYAEHNPTVDNETAKPLNEDGSRRTLLSDFRFWLALPTVLSTP FIMTGIFIHQGFFLPEMGWTPMLFANCFVFYGITHWLSSMYAGALVDRFSGRQLLKYYPIPMLMALLLASQLTGDWVAYV LLISLGTAIGSGGPIINALWAEVYGTKHLGRIRALMASLAVISTSISPILFGYLIDSGITGPELFFWLFMYVLLAMFFAF FSYSNKKTLKI
Sequences:
>Translated_411_residues MIQEYLRFIRHSWPILIFGMMTVFMGNFGQSFFISWFGSSFQESLGLSATSYGTAYSSATLASGLLLMWIGGSIDKVSLE KFVIFCTIGLFLAALTLWQANNLTMLVIGIFLLRFFGQGLFPHTAITTMMKTFSLNRGKGLSVATTGVPLGEIILPSVAV FLIAQFGWQQSWMVIALSVPLLYLPMALFLIKRGKNKKYAEHNPTVDNETAKPLNEDGSRRTLLSDFRFWLALPTVLSTP FIMTGIFIHQGFFLPEMGWTPMLFANCFVFYGITHWLSSMYAGALVDRFSGRQLLKYYPIPMLMALLLASQLTGDWVAYV LLISLGTAIGSGGPIINALWAEVYGTKHLGRIRALMASLAVISTSISPILFGYLIDSGITGPELFFWLFMYVLLAMFFAF FSYSNKKTLKI >Mature_411_residues MIQEYLRFIRHSWPILIFGMMTVFMGNFGQSFFISWFGSSFQESLGLSATSYGTAYSSATLASGLLLMWIGGSIDKVSLE KFVIFCTIGLFLAALTLWQANNLTMLVIGIFLLRFFGQGLFPHTAITTMMKTFSLNRGKGLSVATTGVPLGEIILPSVAV FLIAQFGWQQSWMVIALSVPLLYLPMALFLIKRGKNKKYAEHNPTVDNETAKPLNEDGSRRTLLSDFRFWLALPTVLSTP FIMTGIFIHQGFFLPEMGWTPMLFANCFVFYGITHWLSSMYAGALVDRFSGRQLLKYYPIPMLMALLLASQLTGDWVAYV LLISLGTAIGSGGPIINALWAEVYGTKHLGRIRALMASLAVISTSISPILFGYLIDSGITGPELFFWLFMYVLLAMFFAF FSYSNKKTLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45870; Mature: 45870
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQEYLRFIRHSWPILIFGMMTVFMGNFGQSFFISWFGSSFQESLGLSATSYGTAYSSAT CHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LASGLLLMWIGGSIDKVSLEKFVIFCTIGLFLAALTLWQANNLTMLVIGIFLLRFFGQGL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC FPHTAITTMMKTFSLNRGKGLSVATTGVPLGEIILPSVAVFLIAQFGWQQSWMVIALSVP CCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH LLYLPMALFLIKRGKNKKYAEHNPTVDNETAKPLNEDGSRRTLLSDFRFWLALPTVLSTP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH FIMTGIFIHQGFFLPEMGWTPMLFANCFVFYGITHWLSSMYAGALVDRFSGRQLLKYYPI HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCH PMLMALLLASQLTGDWVAYVLLISLGTAIGSGGPIINALWAEVYGTKHLGRIRALMASLA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH VISTSISPILFGYLIDSGITGPELFFWLFMYVLLAMFFAFFSYSNKKTLKI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MIQEYLRFIRHSWPILIFGMMTVFMGNFGQSFFISWFGSSFQESLGLSATSYGTAYSSAT CHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LASGLLLMWIGGSIDKVSLEKFVIFCTIGLFLAALTLWQANNLTMLVIGIFLLRFFGQGL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC FPHTAITTMMKTFSLNRGKGLSVATTGVPLGEIILPSVAVFLIAQFGWQQSWMVIALSVP CCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH LLYLPMALFLIKRGKNKKYAEHNPTVDNETAKPLNEDGSRRTLLSDFRFWLALPTVLSTP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH FIMTGIFIHQGFFLPEMGWTPMLFANCFVFYGITHWLSSMYAGALVDRFSGRQLLKYYPI HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCH PMLMALLLASQLTGDWVAYVLLISLGTAIGSGGPIINALWAEVYGTKHLGRIRALMASLA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH VISTSISPILFGYLIDSGITGPELFFWLFMYVLLAMFFAFFSYSNKKTLKI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA