Click here to switch to the map view.

The map label for this gene is 119945232

Identifier: 119945232

GI number: 119945232

Start: 1845512

End: 1847374

Strand: Reverse

Name: 119945232

Synonym: Ping_1499

Alternate gene names: NA

Gene position: 1847374-1845512 (Counterclockwise)

Preceding gene: 119945233

Following gene: 119945227

Centisome position: 40.52

GC content: 44.61

Gene sequence:

>1863_bases
ATGATTGCATCGATAGTAAAAACCGGCCGTCAAAGACTAACAGGTAATTCTATTATTTACTCTTTGATGTTCGCTACCCT
GCTGTTAATTTCATCCCCACAAGCTATCTCAATGCAGTTGCTGCAGTCAACATTTTTAATCGATAGACACGAGCAAGGCG
ATATTATTGACTTGTCCAACAGGCCTGATGCAAAGGCTTTTTCTGATATCAATAATTTATTGGCGATCAAAGACTATGCA
ACGGCTATCGAAAAAGCGAACACTGTATTAAAAAATAATCCGAATTCAGGTCTGGCAAATGAAGTACTTGGCACCGCCTA
TTTTCTCAACAAACAGCAGGAAAAGGCGGCCACCTCATTACAAAAAGCGATCGAGCTAGAGCCCGGGCAGAGTGGAGCAC
TGACTAAATTGGGCATAATCAAGATGGAGAGTGGTGATATTTTCGAAGCGGAAAAATTATTGTTGAAGGCGATAGAAATT
ACTCCAGCAGATCGGTTTGCACATCAACGCCTTGGTTTGTTATATGAATATCAGGCTAAGGACCAGCGAGCGATACATCA
TTTTCAACTTGGCCTCGAAGGAACCCATGAATCTTATCTCGGTGTTGCCGTCAATCTTGGGCGCTTATTGAATAAATCAG
GCAACTTTGCTGTGACCATTGCGGTACTTGAGCCGCGCGTCTTACTTTACGAGACGAATACTGATGCACAAATGGTGCTA
GCAACTGCCTATCTGGCAACCGGCAATTACCTCGACGCTCGCATGCGATTTCAGCATGTATTGCAGTCAGGGCTGTCGAT
GCCTAAGGCATTGCTTGGGCTTGCCAAGGCACAACGTGGCGAAAGTGATTTTTCTGCCGCTATGAAGACGATAAATAAAC
TTGTTAAACAAAAACCAGATTCTGCTCTGGCGCAGATGGAAAAAGGCGAGATTTTACTGAGGTTAGACCAAAGAAAAAAA
GCCAACAGCGCCTTCAATGAAGCCGTTGCACTAGGCTTAAGCCGCAGTTATGTCAATCAACGTATCGCCAAATTTCACCT
CGATAATAAGGATTTTGCACAGGCGCGTGATATTTATCAGGCGATGGTCGATGATAAAACTGCAGATGTGTTCACCTATG
GTCAATTATCCGAATTATTGATGGGTGAAGGCAATATCGAAAAAGGTGAGCTTATATTGCGTAACGGCATTGAACGTTTC
CCGAACGATGCCTATTTGCACCTGAGGCTGGGAAGTTACCTGGCATCTATCAGAAGTTACGAGGAATCACTCCCTATACT
GGAAAAAGCCACAGAGCTTTCAGCTGATGATATCGCTATCTGGAAAGTATATGCGTTGGCACTTGCACGCACTGACCACA
ACGAGGATGCCGTCAATGCCGCCGCTCGACTCTATGTATTGCAACCCAACAGAACTGAGCCAGCCATCTTCTATGCGACT
CAGTTAGAAGCAAATAAACGTTTTGATGAGGCAGAAACTCTCTATCGAAAAATAATTCAGGCAGTACCCAATCATGCGCT
GGCATTAAATAATCTGGCTAACATCCTTGCTGATAAAGGTGATCATAACGAAGCGGAAACGATGGCAAGACGCGCTGTCG
GTGTGGTGAGTGATAATGCCAGCATACTGGATACGTTAGGTTGGGTTCTCTACAAACAGGGTAACCTGAATGAATCACTA
GAGGTGCTGGATAATGCAAACAAGCTTGCACCGGAAGCTGCTGTTATATGGTATCACAAGGGTGTGGTGCTGGATAAAAC
AGGTCGACGTGCTGAAGCAAAAGTAGCTATTGAAAAAGCCCTTTCAATCAATTCAAAGGCGAATTGGGCAGATGCGGCTG
GCGTGCTTCTGACGCAACTATAA

Upstream 100 bases:

>100_bases
ATAGCAAATAATTAAAAATATATAATTTACAACGTCATGGTTTTATAACAAATGATGAGCATCTTACCCATCACACTATA
AAAATTCAGGGAGCTTAAAA

Downstream 100 bases:

>100_bases
GCCATAATCGTCCTGAGATAAGTTGACACTTTTCAACTTAAATTCAGTAATATTAAAAAAAAGAAACCCAAAAGAAAGTA
CAACAGAAAGAATTTTCCAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain Protein; PEP-CTERM System TPR-Repeat Lipoprotein; Sulfotransferase Domain Family Protein; Tetratricopeptide Domain Protein; Sulfotransferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Glycosyl Transferase Family Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MIASIVKTGRQRLTGNSIIYSLMFATLLLISSPQAISMQLLQSTFLIDRHEQGDIIDLSNRPDAKAFSDINNLLAIKDYA
TAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSLQKAIELEPGQSGALTKLGIIKMESGDIFEAEKLLLKAIEI
TPADRFAHQRLGLLYEYQAKDQRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNTDAQMVL
ATAYLATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGESDFSAAMKTINKLVKQKPDSALAQMEKGEILLRLDQRKK
ANSAFNEAVALGLSRSYVNQRIAKFHLDNKDFAQARDIYQAMVDDKTADVFTYGQLSELLMGEGNIEKGELILRNGIERF
PNDAYLHLRLGSYLASIRSYEESLPILEKATELSADDIAIWKVYALALARTDHNEDAVNAAARLYVLQPNRTEPAIFYAT
QLEANKRFDEAETLYRKIIQAVPNHALALNNLANILADKGDHNEAETMARRAVGVVSDNASILDTLGWVLYKQGNLNESL
EVLDNANKLAPEAAVIWYHKGVVLDKTGRRAEAKVAIEKALSINSKANWADAAGVLLTQL

Sequences:

>Translated_620_residues
MIASIVKTGRQRLTGNSIIYSLMFATLLLISSPQAISMQLLQSTFLIDRHEQGDIIDLSNRPDAKAFSDINNLLAIKDYA
TAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSLQKAIELEPGQSGALTKLGIIKMESGDIFEAEKLLLKAIEI
TPADRFAHQRLGLLYEYQAKDQRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNTDAQMVL
ATAYLATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGESDFSAAMKTINKLVKQKPDSALAQMEKGEILLRLDQRKK
ANSAFNEAVALGLSRSYVNQRIAKFHLDNKDFAQARDIYQAMVDDKTADVFTYGQLSELLMGEGNIEKGELILRNGIERF
PNDAYLHLRLGSYLASIRSYEESLPILEKATELSADDIAIWKVYALALARTDHNEDAVNAAARLYVLQPNRTEPAIFYAT
QLEANKRFDEAETLYRKIIQAVPNHALALNNLANILADKGDHNEAETMARRAVGVVSDNASILDTLGWVLYKQGNLNESL
EVLDNANKLAPEAAVIWYHKGVVLDKTGRRAEAKVAIEKALSINSKANWADAAGVLLTQL
>Mature_620_residues
MIASIVKTGRQRLTGNSIIYSLMFATLLLISSPQAISMQLLQSTFLIDRHEQGDIIDLSNRPDAKAFSDINNLLAIKDYA
TAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSLQKAIELEPGQSGALTKLGIIKMESGDIFEAEKLLLKAIEI
TPADRFAHQRLGLLYEYQAKDQRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNTDAQMVL
ATAYLATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGESDFSAAMKTINKLVKQKPDSALAQMEKGEILLRLDQRKK
ANSAFNEAVALGLSRSYVNQRIAKFHLDNKDFAQARDIYQAMVDDKTADVFTYGQLSELLMGEGNIEKGELILRNGIERF
PNDAYLHLRLGSYLASIRSYEESLPILEKATELSADDIAIWKVYALALARTDHNEDAVNAAARLYVLQPNRTEPAIFYAT
QLEANKRFDEAETLYRKIIQAVPNHALALNNLANILADKGDHNEAETMARRAVGVVSDNASILDTLGWVLYKQGNLNESL
EVLDNANKLAPEAAVIWYHKGVVLDKTGRRAEAKVAIEKALSINSKANWADAAGVLLTQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=445, Percent_Identity=23.1460674157303, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI32307148, Length=445, Percent_Identity=23.1460674157303, Blast_Score=70, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68438; Mature: 68438

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASIVKTGRQRLTGNSIIYSLMFATLLLISSPQAISMQLLQSTFLIDRHEQGDIIDLSN
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCC
RPDAKAFSDINNLLAIKDYATAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSL
CCCHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
QKAIELEPGQSGALTKLGIIKMESGDIFEAEKLLLKAIEITPADRFAHQRLGLLYEYQAK
HHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCC
DQRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNTDAQMVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHH
ATAYLATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGESDFSAAMKTINKLVKQKPD
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
SALAQMEKGEILLRLDQRKKANSAFNEAVALGLSRSYVNQRIAKFHLDNKDFAQARDIYQ
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AMVDDKTADVFTYGQLSELLMGEGNIEKGELILRNGIERFPNDAYLHLRLGSYLASIRSY
HHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
EESLPILEKATELSADDIAIWKVYALALARTDHNEDAVNAAARLYVLQPNRTEPAIFYAT
HHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCEEEEEE
QLEANKRFDEAETLYRKIIQAVPNHALALNNLANILADKGDHNEAETMARRAVGVVSDNA
EECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCH
SILDTLGWVLYKQGNLNESLEVLDNANKLAPEAAVIWYHKGVVLDKTGRRAEAKVAIEKA
HHHHHHHHHHEECCCCCHHHHHHHCCHHCCCCEEEEEEECCEEEECCCCCHHHHHHHHHH
LSINSKANWADAAGVLLTQL
HCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIASIVKTGRQRLTGNSIIYSLMFATLLLISSPQAISMQLLQSTFLIDRHEQGDIIDLSN
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCC
RPDAKAFSDINNLLAIKDYATAIEKANTVLKNNPNSGLANEVLGTAYFLNKQQEKAATSL
CCCHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
QKAIELEPGQSGALTKLGIIKMESGDIFEAEKLLLKAIEITPADRFAHQRLGLLYEYQAK
HHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCC
DQRAIHHFQLGLEGTHESYLGVAVNLGRLLNKSGNFAVTIAVLEPRVLLYETNTDAQMVL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHH
ATAYLATGNYLDARMRFQHVLQSGLSMPKALLGLAKAQRGESDFSAAMKTINKLVKQKPD
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
SALAQMEKGEILLRLDQRKKANSAFNEAVALGLSRSYVNQRIAKFHLDNKDFAQARDIYQ
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AMVDDKTADVFTYGQLSELLMGEGNIEKGELILRNGIERFPNDAYLHLRLGSYLASIRSY
HHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
EESLPILEKATELSADDIAIWKVYALALARTDHNEDAVNAAARLYVLQPNRTEPAIFYAT
HHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCEEEEEE
QLEANKRFDEAETLYRKIIQAVPNHALALNNLANILADKGDHNEAETMARRAVGVVSDNA
EECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCH
SILDTLGWVLYKQGNLNESLEVLDNANKLAPEAAVIWYHKGVVLDKTGRRAEAKVAIEKA
HHHHHHHHHHEECCCCCHHHHHHHCCHHCCCCEEEEEEECCEEEECCCCCHHHHHHHHHH
LSINSKANWADAAGVLLTQL
HCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA