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The map label for this gene is 119945231

Identifier: 119945231

GI number: 119945231

Start: 1844099

End: 1845196

Strand: Direct

Name: 119945231

Synonym: Ping_1497

Alternate gene names: NA

Gene position: 1844099-1845196 (Clockwise)

Preceding gene: 119945230

Following gene: 119945250

Centisome position: 40.44

GC content: 45.17

Gene sequence:

>1098_bases
ATGGATAAGCAACCGCCAGCGTTTTTCCCTACCCGCTATTGGCATAAAGAGGTGGGAAAACATCAGGGAGAGGACTTGGT
TACTTGTGATTTATGTCCTCATCATTGCCACCTGCGTGAAGGAAAACGTGGAATTTGTTACGTGCGTATGAATCATCAGG
GTAAAATAGTACTGACCAGTTACGGCCATTCTTCGGGTTTTTGCATTGATCCGATTGAGAAAAAACCGCTTAACCATTTT
TACCCCGGCTCAAGGGTGATGTCATTTGGCACCGCCGGTTGTAACCTCTCCTGCCAATTCTGCCAAAATTGGGAGATCAG
TAAATCCCGTGAAATAGATACTCTTTGTGATACCGCTATGCCCGAACAACTGGCACGGGTTGCCAAAGAGCAGGGCTGTA
AAAGTATCGCCTTTACTTATAACGATCCGGTGATCTTTATGGAATATGCCATTGATGTTGCCATCGTTGCTAAAGCATTG
GGACTCAAAAGTGTCGCAGTCAGTGCGGGTTATATGTGTGATCAGCCTAGAGTTGAATTCTATCGCCATATGGATGCCGC
CAATATTGATTTAAAAGGCTTTACCGAGGCGTTCTATCATAAAATCTGCCACGGGCAGTTACAACCCGTATTAGATACCC
TGTTATATCTTAAACATCACACCTCGGTCTGGTTGGAAATTACCACTTTACTGATCCCCGGTGAAAATGACAGCGATCAG
GAATTACATAAAATGTGTCAATGGATAGCTGAAAACCTTGGCCTGAATGTACCGCTGCACTTCAGTGCTTTTCATCCTGA
TTTTAAAATGATGGATAAAGAGTCCACGCCACTAGCGACCCTATTACGCGCCAGAAAAATAGCGTTGAGCTATGGCCTGC
ATCATGTGTATTGTGGCAATGTGCATGATAGCAAGTCAGACAGTACTTATTGTCCACATTGCCAAGATTTGCTGATTGAA
AGGGACTGGTATCAGTTGGGACAATATAACCTCGACGAGTTCGGGCACTGTTTGAATTGCGGGGAGCTATTGGCAGGGCG
GTTTGCCAGAACGAAAGAAAATTTTGGCCGGCGGCGAGTACCCGTCAAAATAGGATGA

Upstream 100 bases:

>100_bases
TCTTGCTTGCTGACGGAGAATCTCATTAGAGAGCCTGCTAATGCCTGTTGTTGTAAATAAACTATAATTTAGGTATATAA
CAATAAACAGGGTGATGACT

Downstream 100 bases:

>100_bases
CAGTATTGTCTATACCTAAACTATTTGAAGATGCATCCTCAAGTAGTTTGAGTATAAAACCTATTTTCGTTAATTTAAGA
CGAATTTTAATTTGTTATTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MDKQPPAFFPTRYWHKEVGKHQGEDLVTCDLCPHHCHLREGKRGICYVRMNHQGKIVLTSYGHSSGFCIDPIEKKPLNHF
YPGSRVMSFGTAGCNLSCQFCQNWEISKSREIDTLCDTAMPEQLARVAKEQGCKSIAFTYNDPVIFMEYAIDVAIVAKAL
GLKSVAVSAGYMCDQPRVEFYRHMDAANIDLKGFTEAFYHKICHGQLQPVLDTLLYLKHHTSVWLEITTLLIPGENDSDQ
ELHKMCQWIAENLGLNVPLHFSAFHPDFKMMDKESTPLATLLRARKIALSYGLHHVYCGNVHDSKSDSTYCPHCQDLLIE
RDWYQLGQYNLDEFGHCLNCGELLAGRFARTKENFGRRRVPVKIG

Sequences:

>Translated_365_residues
MDKQPPAFFPTRYWHKEVGKHQGEDLVTCDLCPHHCHLREGKRGICYVRMNHQGKIVLTSYGHSSGFCIDPIEKKPLNHF
YPGSRVMSFGTAGCNLSCQFCQNWEISKSREIDTLCDTAMPEQLARVAKEQGCKSIAFTYNDPVIFMEYAIDVAIVAKAL
GLKSVAVSAGYMCDQPRVEFYRHMDAANIDLKGFTEAFYHKICHGQLQPVLDTLLYLKHHTSVWLEITTLLIPGENDSDQ
ELHKMCQWIAENLGLNVPLHFSAFHPDFKMMDKESTPLATLLRARKIALSYGLHHVYCGNVHDSKSDSTYCPHCQDLLIE
RDWYQLGQYNLDEFGHCLNCGELLAGRFARTKENFGRRRVPVKIG
>Mature_365_residues
MDKQPPAFFPTRYWHKEVGKHQGEDLVTCDLCPHHCHLREGKRGICYVRMNHQGKIVLTSYGHSSGFCIDPIEKKPLNHF
YPGSRVMSFGTAGCNLSCQFCQNWEISKSREIDTLCDTAMPEQLARVAKEQGCKSIAFTYNDPVIFMEYAIDVAIVAKAL
GLKSVAVSAGYMCDQPRVEFYRHMDAANIDLKGFTEAFYHKICHGQLQPVLDTLLYLKHHTSVWLEITTLLIPGENDSDQ
ELHKMCQWIAENLGLNVPLHFSAFHPDFKMMDKESTPLATLLRARKIALSYGLHHVYCGNVHDSKSDSTYCPHCQDLLIE
RDWYQLGQYNLDEFGHCLNCGELLAGRFARTKENFGRRRVPVKIG

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41621; Mature: 41621

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQPPAFFPTRYWHKEVGKHQGEDLVTCDLCPHHCHLREGKRGICYVRMNHQGKIVLTS
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCEEEEE
YGHSSGFCIDPIEKKPLNHFYPGSRVMSFGTAGCNLSCQFCQNWEISKSREIDTLCDTAM
CCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCEEEHCCCCCCCCCCCCHHHHHHHCC
PEQLARVAKEQGCKSIAFTYNDPVIFMEYAIDVAIVAKALGLKSVAVSAGYMCDQPRVEF
HHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHH
YRHMDAANIDLKGFTEAFYHKICHGQLQPVLDTLLYLKHHTSVWLEITTLLIPGENDSDQ
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCHH
ELHKMCQWIAENLGLNVPLHFSAFHPDFKMMDKESTPLATLLRARKIALSYGLHHVYCGN
HHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECC
VHDSKSDSTYCPHCQDLLIERDWYQLGQYNLDEFGHCLNCGELLAGRFARTKENFGRRRV
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
PVKIG
CEECC
>Mature Secondary Structure
MDKQPPAFFPTRYWHKEVGKHQGEDLVTCDLCPHHCHLREGKRGICYVRMNHQGKIVLTS
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCEEEEEECCCCCEEEEE
YGHSSGFCIDPIEKKPLNHFYPGSRVMSFGTAGCNLSCQFCQNWEISKSREIDTLCDTAM
CCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCEEEHCCCCCCCCCCCCHHHHHHHCC
PEQLARVAKEQGCKSIAFTYNDPVIFMEYAIDVAIVAKALGLKSVAVSAGYMCDQPRVEF
HHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHH
YRHMDAANIDLKGFTEAFYHKICHGQLQPVLDTLLYLKHHTSVWLEITTLLIPGENDSDQ
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCHH
ELHKMCQWIAENLGLNVPLHFSAFHPDFKMMDKESTPLATLLRARKIALSYGLHHVYCGN
HHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECC
VHDSKSDSTYCPHCQDLLIERDWYQLGQYNLDEFGHCLNCGELLAGRFARTKENFGRRRV
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
PVKIG
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]