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The map label for this gene is udk

Identifier: 119945223

GI number: 119945223

Start: 1837207

End: 1837845

Strand: Direct

Name: udk

Synonym: Ping_1489

Alternate gene names: 119945223

Gene position: 1837207-1837845 (Clockwise)

Preceding gene: 119945222

Following gene: 119945224

Centisome position: 40.29

GC content: 38.5

Gene sequence:

>639_bases
TTGGATTCAAAAAATTGTGTTGTTATTGCAATCGCAGGCGCTTCTGCATCGGGCAAAAGTTTAATCGCAAATACTATATA
TCAAGAGTTATGTGAAGAATTAGGGACCAATCAAATAGGGATGATTTCCGAGGATTCTTATTATCGGGATCAAAGCCATC
TTGAATTAGAACTGCGTAAGTTGACTAATTATGATCATCCGAAGGCATTTGAGCATGAGTTGTTGTGCTCTCATCTTAAA
ATGCTAAAAGAGAACTGTTCCGTTAATATCCCTGTTTACAGTTATACCGAGCACACCCGTACGCTAGAATCAGAGACAAT
GACCTCCAAAAAAGTGATTATTTTAGAAGGTATATTATTACTCAACGATTCAGCTTTACGGGAGCAGATAGATGTCAGTA
TTTTTATTGATACACCCCTCGATATCTGTCTTATGCGCCGTTTGGTTCGTGATATGGCCGAGCGAGAAAGAACGATGGAC
TCGGTTTTATTACAATATACAAAAACAGTCCGTCCGATGTTTTTACAGTTTATTGAACCCTCTAAACAGCATGCTGATAT
TATTGTGCCACGTGGAGGCAAAAACCGGATTGCGAAGGATCTTCTCAAAACAAGAATAAAGTACCTATTGGGCAAATAA

Upstream 100 bases:

>100_bases
TTGGGTATATACCTTAATCTTATCTGGTGTTGTTCTTTCTCAGGTATAAAATGTCGCCCCTGTTTGTTGTTTTTTATTTA
CTGATGTGAGGTTTATTAAG

Downstream 100 bases:

>100_bases
ATACGCCGCTATTTAAGGTGATATTTTCCAGAACGGTTTAACTGACAGATTAAGTGCTTTTATCGGCATTATTTCTCCAT
TTTTTATTTTAACCAACCTT

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDSKNCVVIAIAGASASGKSLIANTIYQELCEELGTNQIGMISEDSYYRDQSHLELELRKLTNYDHPKAFEHELLCSHLK
MLKENCSVNIPVYSYTEHTRTLESETMTSKKVIILEGILLLNDSALREQIDVSIFIDTPLDICLMRRLVRDMAERERTMD
SVLLQYTKTVRPMFLQFIEPSKQHADIIVPRGGKNRIAKDLLKTRIKYLLGK

Sequences:

>Translated_212_residues
MDSKNCVVIAIAGASASGKSLIANTIYQELCEELGTNQIGMISEDSYYRDQSHLELELRKLTNYDHPKAFEHELLCSHLK
MLKENCSVNIPVYSYTEHTRTLESETMTSKKVIILEGILLLNDSALREQIDVSIFIDTPLDICLMRRLVRDMAERERTMD
SVLLQYTKTVRPMFLQFIEPSKQHADIIVPRGGKNRIAKDLLKTRIKYLLGK
>Mature_212_residues
MDSKNCVVIAIAGASASGKSLIANTIYQELCEELGTNQIGMISEDSYYRDQSHLELELRKLTNYDHPKAFEHELLCSHLK
MLKENCSVNIPVYSYTEHTRTLESETMTSKKVIILEGILLLNDSALREQIDVSIFIDTPLDICLMRRLVRDMAERERTMD
SVLLQYTKTVRPMFLQFIEPSKQHADIIVPRGGKNRIAKDLLKTRIKYLLGK

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family

Homologues:

Organism=Homo sapiens, GI301129207, Length=202, Percent_Identity=41.5841584158416, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI57863312, Length=202, Percent_Identity=41.5841584158416, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI18699734, Length=208, Percent_Identity=36.0576923076923, Blast_Score=146, Evalue=1e-35,
Organism=Homo sapiens, GI13899253, Length=212, Percent_Identity=33.0188679245283, Blast_Score=131, Evalue=4e-31,
Organism=Homo sapiens, GI209863022, Length=149, Percent_Identity=30.2013422818792, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI87082034, Length=208, Percent_Identity=65.3846153846154, Blast_Score=289, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI17539892, Length=201, Percent_Identity=38.3084577114428, Blast_Score=154, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17539894, Length=201, Percent_Identity=38.3084577114428, Blast_Score=154, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI71981181, Length=206, Percent_Identity=33.495145631068, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324339, Length=171, Percent_Identity=34.5029239766082, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28573516, Length=197, Percent_Identity=41.1167512690355, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573514, Length=197, Percent_Identity=41.1167512690355, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573512, Length=197, Percent_Identity=41.1167512690355, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI45550449, Length=197, Percent_Identity=41.1167512690355, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI221458995, Length=213, Percent_Identity=36.6197183098592, Blast_Score=140, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24649624, Length=214, Percent_Identity=36.4485981308411, Blast_Score=140, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URK_PSYIN (A1SUY9)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942903.1
- ProteinModelPortal:   A1SUY9
- SMR:   A1SUY9
- STRING:   A1SUY9
- GeneID:   4625829
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_1489
- eggNOG:   COG0572
- HOGENOM:   HBG527126
- OMA:   DQIGVIA
- PhylomeDB:   A1SUY9
- ProtClustDB:   PRK05480
- BioCyc:   PING357804:PING_1489-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00551
- InterPro:   IPR006083
- InterPro:   IPR000764
- PANTHER:   PTHR10285:SF6
- PRINTS:   PR00988
- TIGRFAMs:   TIGR00235

Pfam domain/function: PF00485 PRK

EC number: =2.7.1.48

Molecular weight: Translated: 24294; Mature: 24294

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKNCVVIAIAGASASGKSLIANTIYQELCEELGTNQIGMISEDSYYRDQSHLELELRK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHH
LTNYDHPKAFEHELLCSHLKMLKENCSVNIPVYSYTEHTRTLESETMTSKKVIILEGILL
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECHHH
LNDSALREQIDVSIFIDTPLDICLMRRLVRDMAERERTMDSVLLQYTKTVRPMFLQFIEP
CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKQHADIIVPRGGKNRIAKDLLKTRIKYLLGK
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSKNCVVIAIAGASASGKSLIANTIYQELCEELGTNQIGMISEDSYYRDQSHLELELRK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHH
LTNYDHPKAFEHELLCSHLKMLKENCSVNIPVYSYTEHTRTLESETMTSKKVIILEGILL
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECHHH
LNDSALREQIDVSIFIDTPLDICLMRRLVRDMAERERTMDSVLLQYTKTVRPMFLQFIEP
CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SKQHADIIVPRGGKNRIAKDLLKTRIKYLLGK
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA