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The map label for this gene is ytsP [H]

Identifier: 119945222

GI number: 119945222

Start: 1836489

End: 1836941

Strand: Direct

Name: ytsP [H]

Synonym: Ping_1488

Alternate gene names: 119945222

Gene position: 1836489-1836941 (Clockwise)

Preceding gene: 119945221

Following gene: 119945223

Centisome position: 40.28

GC content: 39.07

Gene sequence:

>453_bases
ATGACATTTAAAGATTATAAATTATTAAGCCAACAAGCCGTTGCATTAATTGCAGATGAAACGGATTTAACTGCAAACCT
TGCGAATCTCAGTGCATTACTCAATATGAACTTGGATAATATTAATTGGGTCGGGTTTTACTTGTTAAAGGATAACCAAT
TAGTTTTAGGTCCTTTTCAAGGCCAGCCCGCCTGTATTCGTATTCCCTTAAATACAGGCGTGTGTGGAAAAGCATTTTCT
ACCAATACGATTCAAAGAGTGGCCGATGTGCAGCAATTTGTAGGACATATTGCCTGTGATGCAAACAGCCAATCTGAAAT
AGTTTTACCTATCAGTCTACAAGGAGCACCTGCGCTGCTATTAGATATAGATAGCCCGATTAAAAACAGGTTCACACAAA
ACGATCAAGATGGACTAGCCTACTTGGTTGAACAGATACAACAGCACCTGTGA

Upstream 100 bases:

>100_bases
AACCGCTCGTGTATTATCGCGATCATTACTCTGTTTTGGGCATCAGTTCAAGGCTTTGTTGATAGCACACATTCATTCCC
CCAACCCATAAAGATAAAAT

Downstream 100 bases:

>100_bases
TTTTGATCTTGCAGGGGAAGCAGTAGCACTGTTTTTGGTGTTATTGGTACAATAAACAATGATCAATGTTGTTAGAATGC
TTTGATTTAGAATGACCAGA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTFKDYKLLSQQAVALIADETDLTANLANLSALLNMNLDNINWVGFYLLKDNQLVLGPFQGQPACIRIPLNTGVCGKAFS
TNTIQRVADVQQFVGHIACDANSQSEIVLPISLQGAPALLLDIDSPIKNRFTQNDQDGLAYLVEQIQQHL

Sequences:

>Translated_150_residues
MTFKDYKLLSQQAVALIADETDLTANLANLSALLNMNLDNINWVGFYLLKDNQLVLGPFQGQPACIRIPLNTGVCGKAFS
TNTIQRVADVQQFVGHIACDANSQSEIVLPISLQGAPALLLDIDSPIKNRFTQNDQDGLAYLVEQIQQHL
>Mature_149_residues
TFKDYKLLSQQAVALIADETDLTANLANLSALLNMNLDNINWVGFYLLKDNQLVLGPFQGQPACIRIPLNTGVCGKAFST
NTIQRVADVQQFVGHIACDANSQSEIVLPISLQGAPALLLDIDSPIKNRFTQNDQDGLAYLVEQIQQHL

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=145, Percent_Identity=53.7931034482759, Blast_Score=156, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6322781, Length=138, Percent_Identity=40.5797101449275, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16455; Mature: 16324

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKDYKLLSQQAVALIADETDLTANLANLSALLNMNLDNINWVGFYLLKDNQLVLGPFQ
CCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCEEEEECCC
GQPACIRIPLNTGVCGKAFSTNTIQRVADVQQFVGHIACDANSQSEIVLPISLQGAPALL
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCEEE
LDIDSPIKNRFTQNDQDGLAYLVEQIQQHL
EECCCHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TFKDYKLLSQQAVALIADETDLTANLANLSALLNMNLDNINWVGFYLLKDNQLVLGPFQ
CCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCEEEEECCC
GQPACIRIPLNTGVCGKAFSTNTIQRVADVQQFVGHIACDANSQSEIVLPISLQGAPALL
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCEEE
LDIDSPIKNRFTQNDQDGLAYLVEQIQQHL
EECCCHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]