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The map label for this gene is ychE [C]

Identifier: 119945199

GI number: 119945199

Start: 1807844

End: 1808446

Strand: Direct

Name: ychE [C]

Synonym: Ping_1463

Alternate gene names: 119945199

Gene position: 1807844-1808446 (Clockwise)

Preceding gene: 119945198

Following gene: 119945200

Centisome position: 39.65

GC content: 38.14

Gene sequence:

>603_bases
ATGTTGGAAACGTTTTTTACCCTTTATTTAAAGATGTTTTTTATGATGACACCTTTTTTTGTGTTGTCTATTTTCTTGAG
TTTAAGTAAAAAGCTTAGCAATCCTGCGAAAAAAGTGGTTATTTTAAGATCCTCAATTGCCGTTGCTGTTGCGGGTTTAA
TTTTTTTATTATTTGGTAAATATATTTTTAGCTTGTTTGGTATTACCTTAGATGCTTTTAAAATTGGTGCAGGGACAGTT
CTCTTTTTAAGTGCCTTAGAGATGATTAAGGGTGGAGAAGTACCTGAAAACACCATGAAAAAAGGCAGTGATTTTGCCAT
TGTGCCGCTTGCTATTCCAAGTGCCATCGGGCCTGGTCTGATTGGTGTTTTAATGGTTATCGGTGCTGAGATGTCCGGTG
TGCTGGGGATAACGCTGGTTATTTTGTCATTACTTGCCGCCGTTATTTCACTCGCTGGGGTTTTATTACTTTCAAACAAA
TTGCAGGATTTAATTGGCGAGCAAGGTTTGGAAATTATACCCAAAATTACCGGGTTATTTGTTTCTGCCATTGGCGCTCA
AATCATTTTCTCCGGCATTCAGGGCTTCCTGTTGCAGTCATAA

Upstream 100 bases:

>100_bases
TCGATTTTTTTGATTGATTGATTTATTTAAGCGTTTTTTTACCCGAATATATTAATGATTGTGTTAGCATTGCGTTTTTA
AAAACTAGAGTGAGCCTGCA

Downstream 100 bases:

>100_bases
TCGAGTATCTTCAGACGATTTTAACCCGCATAACTGAATATAAAAAGAGTGGATTTGGTATAACGGGTTGATTTCTCATG
TTCGCACCCCTATATCCTCT

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLETFFTLYLKMFFMMTPFFVLSIFLSLSKKLSNPAKKVVILRSSIAVAVAGLIFLLFGKYIFSLFGITLDAFKIGAGTV
LFLSALEMIKGGEVPENTMKKGSDFAIVPLAIPSAIGPGLIGVLMVIGAEMSGVLGITLVILSLLAAVISLAGVLLLSNK
LQDLIGEQGLEIIPKITGLFVSAIGAQIIFSGIQGFLLQS

Sequences:

>Translated_200_residues
MLETFFTLYLKMFFMMTPFFVLSIFLSLSKKLSNPAKKVVILRSSIAVAVAGLIFLLFGKYIFSLFGITLDAFKIGAGTV
LFLSALEMIKGGEVPENTMKKGSDFAIVPLAIPSAIGPGLIGVLMVIGAEMSGVLGITLVILSLLAAVISLAGVLLLSNK
LQDLIGEQGLEIIPKITGLFVSAIGAQIIFSGIQGFLLQS
>Mature_200_residues
MLETFFTLYLKMFFMMTPFFVLSIFLSLSKKLSNPAKKVVILRSSIAVAVAGLIFLLFGKYIFSLFGITLDAFKIGAGTV
LFLSALEMIKGGEVPENTMKKGSDFAIVPLAIPSAIGPGLIGVLMVIGAEMSGVLGITLVILSLLAAVISLAGVLLLSNK
LQDLIGEQGLEIIPKITGLFVSAIGAQIIFSGIQGFLLQS

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=208, Percent_Identity=27.8846153846154, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789842, Length=187, Percent_Identity=27.807486631016, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21177; Mature: 21177

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETFFTLYLKMFFMMTPFFVLSIFLSLSKKLSNPAKKVVILRSSIAVAVAGLIFLLFGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YIFSLFGITLDAFKIGAGTVLFLSALEMIKGGEVPENTMKKGSDFAIVPLAIPSAIGPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEHHHHHHHHCHHH
IGVLMVIGAEMSGVLGITLVILSLLAAVISLAGVLLLSNKLQDLIGEQGLEIIPKITGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VSAIGAQIIFSGIQGFLLQS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLETFFTLYLKMFFMMTPFFVLSIFLSLSKKLSNPAKKVVILRSSIAVAVAGLIFLLFGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YIFSLFGITLDAFKIGAGTVLFLSALEMIKGGEVPENTMKKGSDFAIVPLAIPSAIGPGL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEHHHHHHHHCHHH
IGVLMVIGAEMSGVLGITLVILSLLAAVISLAGVLLLSNKLQDLIGEQGLEIIPKITGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VSAIGAQIIFSGIQGFLLQS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]