| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is add [H]
Identifier: 119945191
GI number: 119945191
Start: 1794451
End: 1795452
Strand: Direct
Name: add [H]
Synonym: Ping_1455
Alternate gene names: 119945191
Gene position: 1794451-1795452 (Clockwise)
Preceding gene: 119945188
Following gene: 119945192
Centisome position: 39.36
GC content: 43.01
Gene sequence:
>1002_bases ATGATTACTAACACGCTCCCATTAACAGATCTTCACCGTCATCTTGATGGTAATATCCGCATAGAAACCATTTTAGAATT AGGTCAAAAATTTGCCTTACCTTTGCCCGCTTATGATATTGAGGGCTTACGTCCCTATGTGCAAGTTGTTGAAAATGAAG CAGATTTAATGGCTTTTTTATCTAAATTGGATTGGGGTGTCGCGGTGTTGGGCGATCTTGATGCTTGTCGCCGTATTGCC TATGAAAATGTGCAGGATGTGATGCATGCAAAAATTGATTATGCGGAGTTGCGCTTTTCACCTTATTACATGGCAATGAA ACACAATTTACCGCTTGCTGGTGTTGTTGAGGCTGTTGTGGACGGTGTGCATGCGGGGTGTCGCGATTTCTCTGTTAAAG CCAATTTAATCGGCATTATGAGCCGTACTTTCGGCAAGCAACGCTGCCAACAAGAGCTTGCTGCTTTATTAACTCAAAAA GATAAATTAGTTGCAATTGATTTGGCTGGCGATGAATTGGGGCACCCCGGCGAGCATTTTGTCGAACATTTTAAAACAGT TCGAAATGCAAATTTACAGGTCACTGTGCATGCCGGAGAGGCAGCTGGTGCAAGCAGTATTTGGCAGGCAATTAATAAGC TTGGAGCAACCCGCATTGGGCACGGTGTGAAAGCGATTGAAGATCCGACATTATTGGATTATCTGGTTAAACATAAAATA GGGATCGAATCTTGTTTAACCTCAAATAGTCAAACAAGCACGGTGAGCTCCTTTGCAAAGCATCCTATAAAGACTTTTTT AGCGCACGGGGTGCTCGCGTGTTTAAACAGTGATGATCCCGCTGTTGAAGGGATTGAACTCGCGCATGAATATCAAGTGG CGGCAACAAAAGTCGGTTTAAATCAAGACCAAATTCGTCAAGCACAAATTAATGGTCTTGAAGTTGCGTTTCTATCTGAT GCCGAAAAAGCAGCACTGCGTAACGATGCATTAAATCGTTAG
Upstream 100 bases:
>100_bases GCGTAATTAGAATAGCTAGTTACTGCAATCAATGCCTTGCTTTTATGCGTTTTTTCTGCGCCTAAAGAGATCACTAAATT AACGGAATTGGTACTAAATA
Downstream 100 bases:
>100_bases CTATTTATCCACGCGGTGCAATATCTGATTAATTCCTTTACTATCAATTCCCTTCAAAATATATATTCAAGGGGATTGCA TATATTAATCATTAGAAAAA
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MITNTLPLTDLHRHLDGNIRIETILELGQKFALPLPAYDIEGLRPYVQVVENEADLMAFLSKLDWGVAVLGDLDACRRIA YENVQDVMHAKIDYAELRFSPYYMAMKHNLPLAGVVEAVVDGVHAGCRDFSVKANLIGIMSRTFGKQRCQQELAALLTQK DKLVAIDLAGDELGHPGEHFVEHFKTVRNANLQVTVHAGEAAGASSIWQAINKLGATRIGHGVKAIEDPTLLDYLVKHKI GIESCLTSNSQTSTVSSFAKHPIKTFLAHGVLACLNSDDPAVEGIELAHEYQVAATKVGLNQDQIRQAQINGLEVAFLSD AEKAALRNDALNR
Sequences:
>Translated_333_residues MITNTLPLTDLHRHLDGNIRIETILELGQKFALPLPAYDIEGLRPYVQVVENEADLMAFLSKLDWGVAVLGDLDACRRIA YENVQDVMHAKIDYAELRFSPYYMAMKHNLPLAGVVEAVVDGVHAGCRDFSVKANLIGIMSRTFGKQRCQQELAALLTQK DKLVAIDLAGDELGHPGEHFVEHFKTVRNANLQVTVHAGEAAGASSIWQAINKLGATRIGHGVKAIEDPTLLDYLVKHKI GIESCLTSNSQTSTVSSFAKHPIKTFLAHGVLACLNSDDPAVEGIELAHEYQVAATKVGLNQDQIRQAQINGLEVAFLSD AEKAALRNDALNR >Mature_333_residues MITNTLPLTDLHRHLDGNIRIETILELGQKFALPLPAYDIEGLRPYVQVVENEADLMAFLSKLDWGVAVLGDLDACRRIA YENVQDVMHAKIDYAELRFSPYYMAMKHNLPLAGVVEAVVDGVHAGCRDFSVKANLIGIMSRTFGKQRCQQELAALLTQK DKLVAIDLAGDELGHPGEHFVEHFKTVRNANLQVTVHAGEAAGASSIWQAINKLGATRIGHGVKAIEDPTLLDYLVKHKI GIESCLTSNSQTSTVSSFAKHPIKTFLAHGVLACLNSDDPAVEGIELAHEYQVAATKVGLNQDQIRQAQINGLEVAFLSD AEKAALRNDALNR
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=336, Percent_Identity=30.952380952381, Blast_Score=140, Evalue=1e-33, Organism=Escherichia coli, GI1787910, Length=328, Percent_Identity=64.3292682926829, Blast_Score=452, Evalue=1e-128, Organism=Caenorhabditis elegans, GI17538512, Length=337, Percent_Identity=32.6409495548961, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI32565969, Length=337, Percent_Identity=32.6409495548961, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=25.3776435045317, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24645260, Length=327, Percent_Identity=23.2415902140673, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI45553183, Length=187, Percent_Identity=29.9465240641711, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI17737615, Length=187, Percent_Identity=29.9465240641711, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36434; Mature: 36434
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNTLPLTDLHRHLDGNIRIETILELGQKFALPLPAYDIEGLRPYVQVVENEADLMAFL CCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHH SKLDWGVAVLGDLDACRRIAYENVQDVMHAKIDYAELRFSPYYMAMKHNLPLAGVVEAVV HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHH DGVHAGCRDFSVKANLIGIMSRTFGKQRCQQELAALLTQKDKLVAIDLAGDELGHPGEHF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH VEHFKTVRNANLQVTVHAGEAAGASSIWQAINKLGATRIGHGVKAIEDPTLLDYLVKHKI HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCHHCCCHHHHHHHHHHHC GIESCLTSNSQTSTVSSFAKHPIKTFLAHGVLACLNSDDPAVEGIELAHEYQVAATKVGL CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC NQDQIRQAQINGLEVAFLSDAEKAALRNDALNR CHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC >Mature Secondary Structure MITNTLPLTDLHRHLDGNIRIETILELGQKFALPLPAYDIEGLRPYVQVVENEADLMAFL CCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHH SKLDWGVAVLGDLDACRRIAYENVQDVMHAKIDYAELRFSPYYMAMKHNLPLAGVVEAVV HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHH DGVHAGCRDFSVKANLIGIMSRTFGKQRCQQELAALLTQKDKLVAIDLAGDELGHPGEHF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH VEHFKTVRNANLQVTVHAGEAAGASSIWQAINKLGATRIGHGVKAIEDPTLLDYLVKHKI HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCHHCCCHHHHHHHHHHHC GIESCLTSNSQTSTVSSFAKHPIKTFLAHGVLACLNSDDPAVEGIELAHEYQVAATKVGL CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC NQDQIRQAQINGLEVAFLSDAEKAALRNDALNR CHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA