Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 119945187

GI number: 119945187

Start: 1787164

End: 1787592

Strand: Direct

Name: ydiI [C]

Synonym: Ping_1451

Alternate gene names: 119945187

Gene position: 1787164-1787592 (Clockwise)

Preceding gene: 119945186

Following gene: 119945188

Centisome position: 39.2

GC content: 42.89

Gene sequence:

>429_bases
ATGTCGATTTGGAAAAAAAACACGGATTTAGCGCGCTTAAATGCAACCAGTGAAAAGACACTGACCGCTCACTTGGGCAT
TTTATTTACCGAGGTGGGCGATAACTCTTTAACTGGGACAATGCCTGTTGACCAGCGCACTGTCCAGCCTTTTGGGCTGT
TACATGGTGGTGCATCTGTTGTTTTAGCTGAAACGTTAGGCAGTCTGGCTGCTAACTTAACTGTCCCGCAAGATAAAGTT
TGTGTGGGCCTGGAAGTTAATGCCAATCATATACGTGGTGTAAAATCTGGGATTGTTATTGGTACTGCAACGGCGCTGCA
CATAGGTTATACAACACAAATTTGGTCCATTGAAATAAAAAATGAAAGAGGGCAATTGGTGTGTATATCACGCCTGACTA
TTGCGGTTATTAATAAACCTATACCCTAA

Upstream 100 bases:

>100_bases
ATTGAAGGGCATACATTAAAACACCCTGTGCAGGCGCTCTTAGAGATTCTATAGAAATCTTATATAACATAATTTACTGG
AAAAAAAGTACAGGACAAAA

Downstream 100 bases:

>100_bases
CTAGCCAGATATTTAGATTTTATTGCTAGTTTTTAAACAGATAAAATAGCGCTGTGGTAATTGATCACAAGGCACTTAAA
TAAAAAAGAGAAAGTTATGA

Product: phenylacetic acid degradation-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSIWKKNTDLARLNATSEKTLTAHLGILFTEVGDNSLTGTMPVDQRTVQPFGLLHGGASVVLAETLGSLAANLTVPQDKV
CVGLEVNANHIRGVKSGIVIGTATALHIGYTTQIWSIEIKNERGQLVCISRLTIAVINKPIP

Sequences:

>Translated_142_residues
MSIWKKNTDLARLNATSEKTLTAHLGILFTEVGDNSLTGTMPVDQRTVQPFGLLHGGASVVLAETLGSLAANLTVPQDKV
CVGLEVNANHIRGVKSGIVIGTATALHIGYTTQIWSIEIKNERGQLVCISRLTIAVINKPIP
>Mature_141_residues
SIWKKNTDLARLNATSEKTLTAHLGILFTEVGDNSLTGTMPVDQRTVQPFGLLHGGASVVLAETLGSLAANLTVPQDKVC
VGLEVNANHIRGVKSGIVIGTATALHIGYTTQIWSIEIKNERGQLVCISRLTIAVINKPIP

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=135, Percent_Identity=51.8518518518518, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI1786813, Length=135, Percent_Identity=50.3703703703704, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15125; Mature: 14994

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIWKKNTDLARLNATSEKTLTAHLGILFTEVGDNSLTGTMPVDQRTVQPFGLLHGGASV
CCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEE
VLAETLGSLAANLTVPQDKVCVGLEVNANHIRGVKSGIVIGTATALHIGYTTQIWSIEIK
EEHHHHHHHHCCCCCCCCCEEEEEEECCHHCCCCCCCEEEEEEEEEEECEEEEEEEEEEE
NERGQLVCISRLTIAVINKPIP
CCCCCEEEEEEEEEEEECCCCC
>Mature Secondary Structure 
SIWKKNTDLARLNATSEKTLTAHLGILFTEVGDNSLTGTMPVDQRTVQPFGLLHGGASV
CCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEE
VLAETLGSLAANLTVPQDKVCVGLEVNANHIRGVKSGIVIGTATALHIGYTTQIWSIEIK
EEHHHHHHHHCCCCCCCCCEEEEEEECCHHCCCCCCCEEEEEEEEEEECEEEEEEEEEEE
NERGQLVCISRLTIAVINKPIP
CCCCCEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]